Bugs item #1587944, was opened at 2006-10-31 14:39
Message generated for change (Comment added) made by nobody
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Category: POSIX
Group: rpy
Status: Closed
Resolution: Out of Date
Priority: 5
Private: No
Submitted By: Dion (redl0tus)
Assigned to: Walter Moreira (wall_m)
Summary: rpy library fails to initialise on linux
Initial Comment:
I'm running:
Linux kernel 2.6.16
Python 2.3 and 2.4.4c0
R version 2.4.0 (2006-10-03)
I get the following error for both versions of python:
>>> import rpy
RHOME= /usr/lib/R
RVERSION= 2.4.0
RVER= 2040
RUSER= /global/home/dion
Loading Rpy version 2040 ..Error in
checkConflicts(value) : unimplemented type 'character'
in 'asLogical'
Done.
Creating the R object 'r' ..Error in get(x, envir,
mode, inherits) : variable "help" was not found
Traceback (most recent call last):
File "<stdin>", line 1, in ?
File "/usr/lib/python2.3/site-packages/rpy.py", line
318, in ?
r = R()
File "/usr/lib/python2.3/site-packages/rpy.py", line
269, in __init__
self.helpfun = with_mode(NO_CONVERSION,
self.__getitem__('help'))
File "/usr/lib/python2.3/site-packages/rpy.py", line
290, in __getitem__
obj = self.__dict__[name] = self.__dict__.get(name,
self.get(name))
rpy.RException: Error in get(x, envir, mode, inherits)
: variable "help" was not found
Cheers,
d
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Comment By: Nobody/Anonymous (nobody)
Date: 2009-06-08 23:51
Message:
I had this same problem on a Window's machine running R-2.7.0 and Python
2.5
I disabled the help features and it runs OK.
I'll think some more about what variable it's getting confused with.
----------------------------------------------------------------------
Comment By: Dion (redl0tus)
Date: 2007-10-18 07:04
Message:
Logged In: YES
user_id=1076763
Originator: YES
This doesn't happen with the current version of rpy.
----------------------------------------------------------------------
Comment By: Gregory Warnes (warnes)
Date: 2007-10-18 02:39
Message:
Logged In: YES
user_id=9316
Originator: NO
Does this happen with the current version of rpy?
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https://sourceforge.net/tracker/?func=detail&atid=453021&aid=1587944&group_id=48422
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