Hello,
I am very new to rpy and I just wanted
to install the rpy2 package on my Mac OS X 10.6.8
with the python setup.py build install but I fail.
You can see the error-message below!
It seems that the gcc-4.0 failed with exit status 1, for
whatever that means. As I am still very new
to python and compiling etc. I don't know how to
handle this error... What should I do? What
should I check?
Thank you very much
/Johannes
noname:rpy2-2.2.1 admin$ python setup.py build install
running build
running build_py
running build_ext
Configuration for R as a library:
include_dirs: ('/Library/Frameworks/R.framework/Resources/include',
'/Library/Frameworks/R.framework/Resources/include/x86_64')
libraries: ('Rblas', 'Rlapack')
library_dirs: ('/Library/Frameworks/R.framework/Resources/lib/x86_64',)
extra_link_args: ('-framework R', '-F/Library/Frameworks/R.framework/..')
# OSX-specific (included in extra_link_args)
framework_dirs: ('-F/Library/Frameworks/R.framework/..',)
frameworks: ('-framework R',)
building 'rpy2.rinterface._rinterface' extension
gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -arch ppc -arch i386 -g -O2
-DNDEBUG -g -O3 -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DCSTACK_DEFNS=1
-DRIF_HAS_RSIGHAND=1 -I./rpy/rinterface
-I/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/x86_64 -c
./rpy/rinterface/_rinterface.c -o
build/temp.macosx-10.3-fat-2.6/./rpy/rinterface/_rinterface.o
In file included from /usr/include/architecture/i386/math.h:626,
from /usr/include/math.h:28,
from
/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/pyport.h:235,
from
/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/Python.h:58,
from ./rpy/rinterface/_rinterface.c:55:
/usr/include/AvailabilityMacros.h:108:14: warning: #warning Building for Intel
with Mac OS X Deployment Target < 10.4 is invalid.
In file included from /Library/Frameworks/R.framework/Resources/include/R.h:34,
from ./rpy/rinterface/_rinterface.c:61:
/Library/Frameworks/R.framework/Resources/include/Rconfig.h:5:25: error:
ppc/Rconfig.h: No such file or directory
In file included from ./rpy/rinterface/_rinterface.c:62:
/Library/Frameworks/R.framework/Resources/include/Rversion.h:5:26: error:
ppc/Rversion.h: No such file or directory
In file included from ./rpy/rinterface/_rinterface.c:100:
./rpy/rinterface/r_utils.h:13: error: ‘R_MAJOR’ undeclared here (not in a
function)
./rpy/rinterface/r_utils.h:13: error: ‘R_MINOR’ undeclared here (not in a
function)
./rpy/rinterface/r_utils.h:13: error: ‘R_STATUS’ undeclared here (not in a
function)
./rpy/rinterface/r_utils.h:14: error: ‘R_SVN_REVISION’ undeclared here (not
in a function)
lipo: can't figure out the architecture type of: /var/tmp//ccPk52r1.out
error: command 'gcc-4.0' failed with exit status 1
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