May be a mismatch between the R library rpy2 was built against. It
should not segfault thought.
Can you try:
import rpy2.rinterface
# Does this give a version number for R that you would expect ?
print(rpy2.rinterface.R_VERSION_BUILD)
# Does this complete without a crash ?
print(rpy2.rinterface.initr())
L.
On 2012-07-24 15:09, Nick Schurch wrote:
Hi,
I've installed rpy2 (2.2.4) with python 2.6.4 against R2.11 on centos
5.6. When I import rpy2 it works fine, but when I try to run tests or
anything else : get:
>>> import rpy2
>>> rpy2.__path__
['/local/lib/python2.6/site-packages/rpy2']
>>> import rpy2.tests
cannot find system Renviron
Fatal error: unable to open the base package
Segmentation fault
Any help greatly appreciated...
--
Cheers,
Nick Schurch
Data Analysis Group (The Barton Group),
School of Life Sciences,
University of Dundee,
Dow St,
Dundee,
DD1 5EH,
Scotland,
UK
Tel: +44 1382 388707 <tel:%2B44%201382%20388707>
Fax: +44 1382 345 893
--
Cheers,
Nick Schurch
Data Analysis Group (The Barton Group),
School of Life Sciences,
University of Dundee,
Dow St,
Dundee,
DD1 5EH,
Scotland,
UK
Tel: +44 1382 388707
Fax: +44 1382 345 893
<tel:%2B44%201382%20345%20893>
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