On 2013-01-10 18:22, Samuel Lampa wrote:
> Hi,
>
> I'm tryint to do a "pypher" calculation from my python script, for some
> gene expression stuff.
>
> In R, I would call it like this:
> phyper(q, m, n, k, lower.tail=FALSE, log.p=FALSE)
>
> How do I format the two last parameters, in python?
>
> The four first ones seems simple:
>
> p = r.phyper(q, m, n, k)
>
> ... but if I go (in python):
> r.phyper(q, m, n, k, lower.tail=FALSE, log.p=FALSE)
>
>
> ... gives:
> SyntaxError: keyword can't be an expression
>
> Any hints, how to do this?
dots ('.') are not valid symbol name in Python.
http://rpy.sourceforge.net/rpy2/doc-dev/html/robjects_functions.html?highlight=dot#functions
>
> Best Regards
> // Samuel
>
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