I downloaded 5.3.beta2 recently and then had trouble installing the combinat queue. There seems to be a problem with the patch trac_12181_random_dag-fc.patch. Are others getting an error like this? I have included the end of the log file below:
Gregg - - - - - - - - - Updating guards hg --config 'extensions.hgext.mq=' --config 'ui.username="sage-combinat script"' qselect -q -n hg --config 'extensions.hgext.mq=' --config 'ui.username="sage-combinat script"' qselect no active guards Applying all the patches hg --config 'extensions.hgext.mq=' --config 'ui.username="sage-combinat script"' qpush -a applying trac_11305-rigged_configurations-ts.patch applying trac_9265_tableaux_categories_am.patch applying trac_11425-perm_to_standard_fix-ts.patch applying trac_13072-tuples-of-partitions_am.patch applying trac_13074-tuples-of-tableaux-am.patch applying trac_11521_homset_weakcache_combined.patch skipping trac_715_combined.patch - guarded by '+disabled' applying trac_12894-classcall_setter-nt.patch applying trac_12943-skew-partition-construction-bug-ht.patch skipping sf-experiment-with-lrcalc-nt.patch - guarded by '+disabled' applying trac_12930-add_mt_lattice.patch applying trac_13119_apply_module_morphism_bugfix-mz.patch applying trac_?????-poset_with_edge_labels-cs.patch applying finite_set_map-isomorphic_cartesian_product-nt.patch applying trac_12848-posets-order_ideal_complement_generators_fix-nt.patch applying trac_12920-is_test_methods-nt.patch applying doc_underscore-fh.patch applying trac12215_weak_cached_function-sk.patch applying trac12215_segfault_fixes.patch patching file sage/combinat/sf/sf.py Hunk #1 succeeded at 27 with fuzz 2 (offset 18 lines). Hunk #2 succeeded at 629 with fuzz 1 (offset 410 lines). patching file sage/combinat/sf/sfa.py Hunk #1 succeeded at 198 with fuzz 1 (offset 20 lines). Hunk #2 succeeded at 576 with fuzz 2 (offset 209 lines). applying trac_12510-nonzero_equal_consistency-fh.patch applying trac_10194-factories_policy-fh.patch applying trac_12518-enumerated_set_from_iterator-vd.patch skipping 12380_move_nfactors_methods-sl.patch - guarded by '+5_2_rc0' skipping trac_12466-ss.patch - guarded by '+disabled,' skipping trac_12230-growing_letters-ss.patch - guarded by '+disabled,' skipping trac_8920-alphabet-vd.patch - guarded by '+disabled,' applying trac_12774-coxeter-ms.patch applying trac_12587-simplicial_complex_hash-ts.patch skipping functor_doc_improve-fh.patch - guarded by '+disabled' applying trac_12876_category-fix_abstract_class-nt-rel11521.patch applying trac_12876_category-fix_abstract_class-nt-rel11521-review-nt.patch applying trac11935_weak_pickling_by_construction_rel11943-nt.patch applying trac11935_share_on_base_category.patch applying trac_12895-subcategory-methods-nt.patch patching file sage/categories/realizations.py Hunk #3 succeeded at 173 with fuzz 1 (offset -38 lines). applying trac_8327_universal_cyclotomic_field-cs.patch patching file sage/categories/fields.py Hunk #1 succeeded at 213 with fuzz 2 (offset 30 lines). applying trac_8703-trees-fh.patch applying shape_tree-fc.patch applying trac_11407-list_clone_improve-fh.patch patching file doc/en/reference/structure.rst Hunk #1 succeeded at 17 with fuzz 1 (offset 3 lines). applying mutator-fh.patch applying trac_10193-graded_enumerated_sets-nt.patch applying trac_9280-graded-algebras-example.patch applying trac_9280-graded-algebras-example-review-fs.patch applying doc2test_verb_workaround-nt.patch applying coercion_graph-nt.patch applying trac_10534-generation_of_subsets_and_set_partitions-vd.patch applying trac_11641-combinatorial_statistics_and_maps_decorator-cs.patch applying import_statements-vd.patch applying trac_12250-ktableaux-as.patch applying hall_littlewood_yt-ts.patch skipping trac7797-full_letterplace_wrapper.patch - guarded by '+disabled' skipping trac7797-full_letterplace_wrapper_rel11068.patch - guarded by '+disabled' applying trac_9877_words_sturmian_desubstitution-tm.patch skipping trac_8386_iet_alphabet_bug-vd.patch - guarded by '+disabled' skipping trac_8388_pickling_path-vd.patch - guarded by '+disabled' skipping trac_10883_degree_type_permutationgroup-nb.patch - guarded by '+disabled' applying missing-doc-includes-nt.patch patching file doc/en/reference/categories.rst Hunk #1 succeeded at 11 with fuzz 2 (offset 0 lines). applying trac_11929_8899-ncsf-qsym-fs.patch patching file setup.py Hunk #1 succeeded at 872 with fuzz 1 (offset -1 lines). applying trac_11929_8899-ncsf-qsym-rebase-fs.patch applying trac_11929_8899-ncsf-qsym-doctest-fixes-fs.patch applying trac_11929_8899-ncsf-qsym-new-bases-fs.patch patching file sage/combinat/ncsf_qsym/qsym.py Hunk #1 succeeded at 30 with fuzz 2 (offset 0 lines). applying trac_11929_8899-ncsf-qsym-cb.patch applying trac_10963-more_functorial_constructions-nt.patch patching file sage/categories/fields.py Hunk #2 succeeded at 90 with fuzz 1 (offset 0 lines). skipping trac_10963-more_functorial_constructions-followup-nt.patch - guarded by '+disabled' skipping trac_10963-more_functorial_constructions-followup2-nt.patch - guarded by '+disabled' applying trac_8392-check_permutation-ts.patch applying trac_2023-dynkin_graphs-ts.patch applying needs_review patch needs_review is empty applying 12630_quivers.patch applying 12630_quivers_review-fs.patch applying qpa_interface-fs.patch applying dynamic-fh.patch applying element_compare_consistency-fh.patch applying trees_symmetry_factor-fh.patch skipping trac_12526-remove_nonzero_from_element-fh.patch - guarded by '+Not_Finished' skipping trac_7922-hash-nt.patch - guarded by '+disabled' applying trac_10950-hash_matrices-nt.patch applying trac_13232-plot_latex-nt.patch applying root_system_plot_refactor-nb.patch applying trac_7980-multiple-realizations-extra_do_not_merge-nt.patch applying kschur-as.patch patching file sage/combinat/sf/kschur.py Hunk #3 succeeded at 387 with fuzz 1 (offset 60 lines). skipping unique-representation-fix.patch - guarded by '+disable' skipping unpickle-doc-nt.patch - guarded by '+4_6_2' skipping move_stuff_out_of_parent-nt.patch - guarded by '+disabled' applying trac_8678-module_morphisms-nt.patch applying trac_8359-coxeter-groups-permutation-nt.patch skipping combinatorial-free-module-semiring.patch - guarded by '+5_0' applying trac_12882-generalized_cartan_matrix_as_dynkin_diagram_input-cs.patch patching file sage/combinat/root_system/dynkin_diagram.py Hunk #1 succeeded at 26 with fuzz 2 (offset 6 lines). applying trac_11187-finite_reflection_groups-cs.patch skipping trac_11187-finite_reflection_groups-adjectives-nt.patch - guarded by '+disabled' applying nonnesting_partitions-cs.patch patching file sage/combinat/root_system/root_lattice_realizations.py Hunk #1 succeeded at 698 with fuzz 2 (offset 109 lines). skipping fast_mul-nt.patch - guarded by '+coerce' skipping trac_8878_coerce_dijkstra-nt.patch - guarded by '+coerce' skipping trac_8900-multiparameter_overloading-nt.patch - guarded by '+coerce' applying trac_12587-simplicial_complex_hash-vp.patch applying trac_?????-is_rank_symmetric-cs.patch applying trac_11010-subword_complex-cs.patch applying trac_?????_is_el_shelling-cs.patch patching file sage/combinat/posets/posets.py Hunk #2 succeeded at 2344 with fuzz 2 (offset 125 lines). applying trac_10527-quiver_mutation_type.patch patching file setup.py Hunk #1 succeeded at 869 with fuzz 2 (offset -1 lines). applying trac_10527-quiver_mutation_type-ht.patch applying trac_10538-quiver-cs.patch applying trac_13369-cluster_seed-cs.patch applying trac_10538-mutation_classes-cs.patch applying trac_10538-mutation_type-cs.patch skipping cython-numpy-exp-fh.patch - guarded by '+experimental' applying trac_???-coxeter_diagram_for_quiver_mutation_types.patch patching file sage/combinat/cluster_algebra_quiver/quiver_mutation_type.py Hunk #2 succeeded at 1903 with fuzz 2 (offset -125 lines). applying trac_10819-cluster_complex-cs.patch patching file sage/combinat/cluster_algebra_quiver/all.py Hunk #1 succeeded at 2 with fuzz 1 (offset 0 lines). applying trac_???-fix-bug-in-cyclic-sieving-cs.patch skipping trac_11523-cohen_macaulay_complex-cs.patch - guarded by '+4_7_1' skipping trac_5512-species_equality.patch - guarded by '+disabled' applying trac_13317-species_unique_representation.patch applying trac_10227-species_fixes-mh.patch applying categories-tutorial.patch skipping trac_9107-nested_class_bug-fh.patch - guarded by '+needs_rebase' skipping symmetric_functions_commutative_ring-fh.patch - guarded by '+disabled' applying trac_11111-finite_dimensional_modules-nt.patch patching file sage/categories/algebras.py Hunk #1 succeeded at 23 with fuzz 2 (offset 2 lines). patching file sage/combinat/free_module.py Hunk #5 succeeded at 2165 with fuzz 2 (offset 82 lines). skipping module_morphism_function_extend-fh.patch - guarded by '+keep_for_possible_future_use' applying attrcall-deprecate-nt.patch applying trac_8822-family_constructor-fh.patch skipping trac_8822-family_constructor-review-nt.patch - guarded by '+disabled' applying trac_6484-ranker-improvements-nt.patch applying selector-fh.patch skipping subtrees_generating_order-fh.patch - guarded by '+not_finished' applying trac_11529-rooted_trees-fh.patch applying shuffle_overlap_generic-fh.patch applying operads-fh.patch applying operads_more-fc.patch skipping refactor_integer_vectors_clonableintarray-nb.patch - guarded by '+irpg' applying mupad-interface-improve-fh.patch patching file sage/interfaces/mupad.py Hunk #12 succeeded at 265 with fuzz 2 (offset -2 lines). applying combinat-quickref-jb.patch applying trac_6618_view_viewer_tightpage-followup-nt.patch skipping multisort-mh.patch - guarded by '+4_5' skipping displayhook-fh.patch - guarded by '+5_0_beta11' applying dyck_word_print-fh.patch applying partition_constructor_speedup-fh.patch applying skew_partitions_init_speedup-fh.patch patching file sage/combinat/skew_partition.py Hunk #2 succeeded at 824 with fuzz 1 (offset -1 lines). applying partition_k_boundary_speedup-fh.patch patching file sage/combinat/partition.py Hunk #1 succeeded at 626 with fuzz 2 (offset 126 lines). applying partition_leg_length_speedup-fh.patch applying partition_speedup_jb.patch applying dyck_word_raz-fh.patch patching file sage/combinat/binary_tree.py Hunk #1 succeeded at 436 with fuzz 1 (offset 95 lines). applying latex_dyck-fh.patch applying dyck_to_partitions-fh.patch applying kshape-om.patch applying bintrees_leaf_paths-fh.patch patching file sage/combinat/binary_tree.py Hunk #1 succeeded at 252 with fuzz 2 (offset 58 lines). skipping set_part_std_form-fh.patch - guarded by '+needs_rebase' applying SFparalell-fh.patch applying trac_11109-stable-grothendieck-polynomials-nt.patch patching file sage/categories/weyl_groups.py Hunk #3 succeeded at 357 with fuzz 2 (offset 23 lines). applying coxeter3-mh.patch patching file module_list.py Hunk #1 succeeded at 1899 with fuzz 1 (offset 152 lines). applying coxeter3-mh_rebase-cs.patch applying coxeter3-iterator.patch skipping affinization-bj.patch - guarded by '+disabled' applying gap3_spkg_doc_link-fh.patch applying add_cache-nt.patch patching file sage/categories/sets_cat.py Hunk #1 succeeded at 749 with fuzz 2 (offset 340 lines). applying games_dao-nt.patch skipping trac_7893-free_module-nt.patch - guarded by '+fun' applying copy_on_write-ab.patch applying copy_on_write-fix-fh.patch patching file sage/combinat/copyonwrite.py Hunk #1 succeeded at 1017 with fuzz 2 (offset 845 lines). applying merge_cow_combinatorialobject_ab.patch patching file sage/combinat/combinat.py Hunk #1 succeeded at 1 with fuzz 2 (offset -2 lines). skipping mutability_cleanup-fh.patch - guarded by '+long_compilation' applying finite-subquotients-nt.patch patching file sage/categories/sets_cat.py Hunk #1 succeeded at 691 with fuzz 2 (offset -1 lines). applying finite_set_map_mul-nt.patch applying automatic_monoid-nt.patch applying discrete_function-nt.patch patching file sage/combinat/all.py Hunk #1 succeeded at 107 with fuzz 1 (offset -9 lines). applying discrete_function_exper-fh.patch applying trac_8360_semigroupe-interface-nt.patch applying finite_semigroup-nt.patch applying finite_semigroup-subcategory-methods-nt.patch applying digraphs-as-automatons-nt.patch applying category-symmetric_groups-nt.patch patching file sage/groups/perm_gps/permgroup_named.py Hunk #2 succeeded at 184 with fuzz 2 (offset 0 lines). skipping graph-strongly_connected_components_digraph-optimization-nt.patch - guarded by '+disabled' applying graph-latex-nt.patch skipping cachefunc.patch - guarded by '+5_0' applying test_len_object-fh.patch skipping trac_6520_weakref-cached-function-dr.patch - guarded by '+4_3_3' skipping sturmian_words_classes-abm.patch - guarded by '+disabled' skipping trac_12512-periodic_point.patch - guarded by '+language' skipping language-vd.patch - guarded by '+language' skipping subshift-tm.patch - guarded by '+language' skipping factorial_language_category-tm.patch - guarded by '+disabled' skipping language_of_full_words-vd.patch - guarded by '+experimental' skipping nsegments-vd.patch - guarded by '+experimental' skipping sadic_language-vd.patch - guarded by '+experimental' skipping words_ng-cpp_basic_string.patch - guarded by '+words_ng_fixme' applying invariant_ring_permutation_group-nb.patch applying permutation_inverse-vd.patch skipping subword_c_generators-vd.patch - guarded by '+experimental' applying conjugacy_class_iterator-vd.patch applying wang_tile_set-tm.patch patching file sage/all.py Hunk #1 succeeded at 114 with fuzz 2 (offset 0 lines). applying trac_9439-hyperbolic_geometry-vd.patch applying trac_9557-fundamental_domains-vd.patch applying trac_9806-constellations-vd.patch applying trac_9806-constellations-doc-patch-fc.patch skipping move_iet_into_dynamics-vd.patch - guarded by '+disabled' skipping iet_suspensions-vd.patch - guarded by '+disabled' skipping iet_latex_repr-vd.patch - guarded by '+disabled' skipping iet_interval_diagrams-vd.patch - guarded by '+disabled' skipping strata-vd.patch - guarded by '+disabled' skipping cardinalities_of_Rauzy_diagrams-vd.patch - guarded by '+disabled' skipping improve_constructors_of_iet-vd.patch - guarded by '+disabled' skipping list_orientation_cover-vd.patch - guarded by '+disabled' skipping separatrix_diagram-vd.patch - guarded by '+disabled' skipping origami-vd.patch - guarded by '+disabled' skipping origami_lyapunov_exponents-vd.patch - guarded by '+disabled' applying permutation_groups_stabilizer_chains-rm.patch skipping group_algebras_feature_central_6654_vf.patch - guarded by '+4_1_2' skipping power-series_commutative_PaulDehaye.patch - guarded by '+disabled' applying fqsym-fh.patch applying trac_7983_tableau_fixes-jb.patch applying refactor_sf-jb.patch skipping trac_8589_Group_generator_switched_from_list_to_family_vf.patch - guarded by '+not_wanted' applying trac_8581_multivariate_schubert_step_1-nb.patch patching file sage/combinat/all.py Hunk #1 succeeded at 108 with fuzz 1 (offset -7 lines). patching file setup.py Hunk #1 succeeded at 881 with fuzz 1 (offset -2 lines). applying trac_6629_abstract_ring_of_multivariate_polynomials_with_several_bases_vp.patch patching file sage/combinat/all.py Hunk #1 succeeded at 55 with fuzz 1 (offset -8 lines). applying trac_12460_polynomial_module_on_sym-nb-vp.patch applying update-dot2tex-nt.patch applying sage-demos-and-tutorials-nt.patch skipping cython_tuto-fh.patch - guarded by '+needs_rebase' skipping dynamics-iet-tutorial.patch - guarded by '+4_7' skipping primer-as-demo-nt.patch - guarded by '+disabled' applying graphs_paths_and_cycles_enumeration-abm.patch patch graphs_paths_and_cycles_enumeration-abm.patch is empty applying descents_composition_of_empty_permutation_jyt.patch skipping sloane_new_website_parsers-tm.patch - guarded by '+4_8' applying exterior_algebra-vd.patch patch exterior_algebra-vd.patch is empty applying nested_lists_jb.patch applying dyck_wordsdinv_mz.patch patching file sage/combinat/dyck_word.py Hunk #1 succeeded at 918 with fuzz 1 (offset 492 lines). applying dyck_words_coparen_mz.patch applying hopf_algebra_of_supercharacters-fs.patch patching file sage/combinat/all.py Hunk #1 succeeded at 135 with fuzz 1 (offset -15 lines). applying scha-cleanup-fs.patch skipping category-hom_methods-nt.patch - guarded by '+disabled' skipping sf-tutorial-jb.patch - guarded by '+disabled' applying permutations_descent_values-fh.patch applying sf_principal_specialization-mr.patch patching file sage/combinat/sf/sfa.py Hunk #1 succeeded at 208 with fuzz 1 (offset 2 lines). skipping species_labels-mr.patch - guarded by '+disabled' skipping set-partition-fs.patch - guarded by '+disabled' applying trac_9123-schur-algebra-and-gln-characters-ht.patch patching file sage/groups/matrix_gps/general_linear.py Hunk #1 succeeded at 197 with fuzz 1 (offset -1 lines). applying trac_11386_bracelet_class-dr.patch applying trac_11571_catalan_objects-nm.patch applying trac_12940_affine_permutations-td.patch patching file sage/combinat/all.py Hunk #1 succeeded at 145 with fuzz 1 (offset -4 lines). applying trac_13077_tamari_posets-fc.patch applying catalan_quasi_symmetric-fc.patch applying trac_12181_random_dag-fc.patch patching file sage/sandpiles/sandpile.py Hunk #1 FAILED at 4772 Hunk #2 FAILED at 4833 Hunk #3 FAILED at 4856 Hunk #4 FAILED at 4873 Hunk #5 FAILED at 4885 5 out of 5 hunks FAILED -- saving rejects to file sage/sandpiles/sandpile.py.rej patch failed, unable to continue (try -v) patch failed, rejects left in working dir errors during apply, please fix and refresh trac_12181_random_dag-fc.patch Abort -- You received this message because you are subscribed to the Google Groups "sage-combinat-devel" group. 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