To play devil's advocate:
should the current 2D plotting package be maintained and upgrated
(a lot of work!), or might it be preferable
to slip another graphics engine underneath
(maintaining the API)?

Since R will be a standard package,
using R graphics would be an option:
statisticians need good graphics capabilities,
and have made a lot of effort.

-gerhard

Note R also has an  addon rggobi that allows data brushing.
It might also be of interest
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