On 08/19/2013 01:36 PM, John Cremona wrote:
What would make atlas suddenly decide to start running its tuning code
(building 5.12.beta1) on a machine which a few days ago built 5.11
without that happening?  It's frustrating since even though I am using
make -j32 the tuning code is taking forever...

I've also got an ATLAS build problem with sage-5.12: it builds on one (virtual) machine but not on its host, even though both are running the same operating system, OpenSuse 12.3. This also seems to be related to tuning issues:

I see "Cannot detect CPU throttling." in the virtual machine's build log, where all is fine.

I see this in the failed log:
It appears you have cpu throttling enabled, which makes timings
unreliable and an ATLAS install nonsensical.  Aborting.
See ATLAS/INSTALL.txt for further information
Ignoring CPU throttling by user override!

There are also seemingly more serious statements, like these:
g++ -g -c cf_algorithm.cc -Wall -fno-implicit-templates -I. -I.. -I. -I/waste/cn/sage-5.12.beta0/local -I/waste/cn/sage-5.12.beta0/local/include -DHAVE_CONFIG_H -I/waste/cn/sage-5.12.beta0/local/include -I/waste/cn/sage-5.12.beta0/local/include -o cf_algorithm.og /usr/lib64/gcc/x86_64-suse-linux/4.7/../../../../x86_64-suse-linux/bin/ld: cannot find rpath-link /waste/cn/sage-5.12.beta0/local/lib: No such file or directory
libatlas.a(ATL_SetAtomicCount_mut.o): In function `ATL_SetAtomicCount':
ATL_SetAtomicCount_mut.c:(.text+0x0): multiple definition of `ATL_SetAtomicCount' libatlas.a(ATL_SetAtomicCount_arch.o):ATL_SetAtomicCount_arch.c:(.text+0x0): first defined here libatlas.a(ATL_ResetAtomicCount_mut.o): In function `ATL_ResetAtomicCount': ATL_ResetAtomicCount_mut.c:(.text+0x0): multiple definition of `ATL_ResetAtomicCount'
libatlas.a(ATL_ResetAtomicCount_amd64.o):(.text+0x0): first defined here
libatlas.a(ATL_DecAtomicCount_mut.o): In function `ATL_DecAtomicCount':
ATL_DecAtomicCount_mut.c:(.text+0x0): multiple definition of `ATL_DecAtomicCount'
libatlas.a(ATL_DecAtomicCount_amd64.o):(.text+0x0): first defined here
libatlas.a(ATL_FreeAtomicCount_mut.o): In function `ATL_FreeAtomicCount':
ATL_FreeAtomicCount_mut.c:(.text+0x0): multiple definition of `ATL_FreeAtomicCount' libatlas.a(ATL_FreeAtomicCount_arch.o):ATL_FreeAtomicCount_arch.c:(.text+0x0): first defined here
collect2: error: ld returned 1 exit status

The full build log is at

   http://nullhomotopie.de/sage512build.log.gz

Cheers,
Christian

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