You are trying to compile on a compute node. Traditionally compute nodes are not set up to compile/build things (with exceptions). So I am not surprised he didn't work.
Disclosure: I am user support at a supercomputing centre in New Zealand. Your first stop would be to contact your own support for recommendations. They may not be too happy with you compiling on compute nodes and recommend something else. It could also go the other way and they could provide you what you need. François ________________________________________ From: [email protected] [[email protected]] on behalf of Kate Stange [[email protected]] Sent: Monday, 10 February 2014 17:55 To: [email protected] Subject: [sage-devel] Help compiling on supercomputer! <http://pixel.katestange.net/> Hi all, I just recently received my allocation on the University of Boulder's Research Computing cluster, with the supercomputer JANUS: https://www.rc.colorado.edu/ And so I logged in and compiled sage from source on one of the JANUS compile nodes (6.1.1, downloaded yesterday). I ran make on one node with 12 threads, but after about 20 minutes it failed on git. I'd love to have Sage working on there, so I'm hoping someone out there might be able to make a suggestion. I can contact RC help about this, but I thought it might help to have a few responses here about what to ask them specifically. Here's the relevant bit of git's log: make[4]: Entering directory `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src/perl' /usr/bin/perl Makefile.PL PREFIX='/projects/kast5807/sage-6.1.1/local' INSTALL_BASE='' --localedir='/projects/kast5807/sage-6.1.1/local/share/locale' Can't locate ExtUtils/MakeMaker.pm in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/ vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at Makefile.PL line 3. BEGIN failed--compilation aborted at Makefile.PL line 3. make[4]: *** [perl.mak] Error 2 make[4]: Leaving directory `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src/perl' make[3]: *** [perl/perl.mak] Error 2 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src' Error building git. Thanks! Katherine Stange Department of Mathematics ~ University of Colorado, Boulder ( Campus Box 395, Boulder, Colorado 80309 ~ [email protected]<mailto:[email protected]> ) math: http://math.katestange.net/ photos: http://pixel.katestange.net/ -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/groups/opt_out. This email may be confidential and subject to legal privilege, it may not reflect the views of the University of Canterbury, and it is not guaranteed to be virus free. If you are not an intended recipient, please notify the sender immediately and erase all copies of the message and any attachments. Please refer to http://www.canterbury.ac.nz/emaildisclaimer for more information. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/groups/opt_out.
