Same problem after running .configure and make. Again, it breaks while
trying to build brial. New log attached.
Thanks again,
Jeremy
On 1/22/20 9:45 AM, Jeremy Martin wrote:
Just ran ./configure and am about to try make again. config.log is
attached.
-JLM
On Wednesday, January 22, 2020 at 9:31:40 AM UTC-6, Dima Pasechnik wrote:
hmm, did you re-run ./configure after these installations?
could you post config.log ?
On Wed, 22 Jan 2020, 15:19 Jeremy Martin, <jeremy...@gmail.com
<javascript:>> wrote:
Hmm. I did "brew install libpng" and "brew install
pkg-config", then tried to build again. This time make threw
an error that pkg-config was not installed. Setting the
PKG_CONFIG environment variable does not fix the problem. I'm
not sure what is going on, since pkg-config is located in
/usr/local/bin, which is in both PKG_CONFIG and PATH.
The logfile is attached. Thanks again for your help.
-Jeremy
On Tuesday, January 21, 2020 at 4:32:48 PM UTC-6, Jeremy
Martin wrote:
Thanks, I did not notice that. I will try it and report
back.
-Jeremy
On Tuesday, January 21, 2020 at 2:43:02 PM UTC-6, Dima
Pasechnik wrote:
the interesting part of the log is
* The following required
packages can not be built:
* png
* Try installing png with
`brew install libpng` and
* pkg-config with `brew
install pkg-config`
It seems you are building under Homebrew, but
something goes wrong with libpng.
Do you have it installed?
Do you have Sage's libpng built?
On Tue, Jan 21, 2020 at 8:01 PM Jeremy Martin
<jeremy...@gmail.com> wrote:
>
> I'm trying to build Sage 9.0 from source under MacOS
Mojave 10.14.6. I ran into an error with matplotlib.
The end of the error message is below, and I'm
attaching the logfile.
>
> Error building Sage.
>
> The following package(s) may have failed to build
(not necessarily
> during this run of 'make all-start'):
>
> * package: matplotlib-2.2.4.p0
> log file:
/Applications/sage-9.0/logs/pkgs/matplotlib-2.2.4.p0.log
> build directory:
/Applications/sage-9.0/local/var/tmp/sage/build/matplotlib-2.2.4.p0
>
> Any advice you can give will be helpful. Thanks!
>
> --Jeremy Martin
>
> --
> You received this message because you are subscribed
to the Google Groups "sage-devel" group.
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Found local metadata for brial-1.2.5
Using cached file /Applications/sage-9.0/upstream/brial-1.2.5.tar.bz2
brial-1.2.5
====================================================
Setting up build directory for brial-1.2.5
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Darwin MATH-2QM1DHGG77 18.7.0 Darwin Kernel Version 18.7.0: Sun Dec 1 18:59:03
PST 2019; root:xnu-4903.278.19~1/RELEASE_X86_64 x86_64
****************************************************
C compiler: gcc
C compiler version:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/4.2.1
Apple clang version 11.0.0 (clang-1100.0.33.8)
Target: x86_64-apple-darwin18.7.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
****************************************************
Package 'brial' is currently not installed
Uninstalling 'brial' with legacy uninstaller
Cleaning out old PolyBoRi and BRiAl installations
Configuring brial-1.2.5
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... none
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking for pkg-config... /Applications/sage-8.4/local/bin/pkg-config
checking pkg-config is at least version 0.9.0...
/Applications/sage-8.4/local/bin/pkg-config: line 16:
/Applications/sage-9.0/local/bin/pkgconf: No such file or directory
/Applications/sage-8.4/local/bin/pkg-config: line 16: exec:
/Applications/sage-9.0/local/bin/pkgconf: cannot execute: No such file or
directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking for pkg-config... /Applications/sage-8.4/local/bin/pkg-config
checking pkg-config is at least version 0.9.0...
/Applications/sage-8.4/local/bin/pkg-config: line 16:
/Applications/sage-9.0/local/bin/pkgconf: No such file or directory
/Applications/sage-8.4/local/bin/pkg-config: line 16: exec:
/Applications/sage-9.0/local/bin/pkgconf: cannot execute: No such file or
directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
********************************************************************************
Error configuring brial-1.2.5 See the file
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src/config.log
for details.
********************************************************************************
real 0m12.594s
user 0m5.421s
sys 0m5.498s
************************************************************************
Error installing package brial-1.2.5
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/Applications/sage-9.0/logs/pkgs/brial-1.2.5.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5 and type 'make' or
whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5' &&
'/Applications/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
Found local metadata for brial-1.2.5
Using cached file /Applications/sage-9.0/upstream/brial-1.2.5.tar.bz2
brial-1.2.5
====================================================
Setting up build directory for brial-1.2.5
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Darwin MATH-2QM1DHGG77 18.7.0 Darwin Kernel Version 18.7.0: Sun Dec 1 18:59:03
PST 2019; root:xnu-4903.278.19~1/RELEASE_X86_64 x86_64
****************************************************
C compiler: gcc
C compiler version:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/4.2.1
Apple clang version 11.0.0 (clang-1100.0.33.8)
Target: x86_64-apple-darwin18.7.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
****************************************************
Package 'brial' is currently not installed
Uninstalling 'brial' with legacy uninstaller
Cleaning out old PolyBoRi and BRiAl installations
Configuring brial-1.2.5
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... none
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
********************************************************************************
Error configuring brial-1.2.5 See the file
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src/config.log
for details.
********************************************************************************
real 0m15.639s
user 0m5.441s
sys 0m6.256s
************************************************************************
Error installing package brial-1.2.5
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/Applications/sage-9.0/logs/pkgs/brial-1.2.5.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5 and type 'make' or
whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5' &&
'/Applications/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
Found local metadata for brial-1.2.5
Using cached file /Applications/sage-9.0/upstream/brial-1.2.5.tar.bz2
brial-1.2.5
====================================================
Setting up build directory for brial-1.2.5
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Darwin MATH-2QM1DHGG77 18.7.0 Darwin Kernel Version 18.7.0: Sun Dec 1 18:59:03
PST 2019; root:xnu-4903.278.19~1/RELEASE_X86_64 x86_64
****************************************************
C compiler: gcc
C compiler version:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/4.2.1
Apple clang version 11.0.0 (clang-1100.0.33.8)
Target: x86_64-apple-darwin18.7.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
****************************************************
Package 'brial' is currently not installed
Uninstalling 'brial' with legacy uninstaller
Cleaning out old PolyBoRi and BRiAl installations
Configuring brial-1.2.5
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... none
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
********************************************************************************
Error configuring brial-1.2.5 See the file
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src/config.log
for details.
********************************************************************************
real 0m12.768s
user 0m5.422s
sys 0m5.499s
************************************************************************
Error installing package brial-1.2.5
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/Applications/sage-9.0/logs/pkgs/brial-1.2.5.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5 and type 'make' or
whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5' &&
'/Applications/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
Found local metadata for brial-1.2.5
Using cached file /Applications/sage-9.0/upstream/brial-1.2.5.tar.bz2
brial-1.2.5
====================================================
Setting up build directory for brial-1.2.5
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Darwin MATH-2QM1DHGG77 18.7.0 Darwin Kernel Version 18.7.0: Sun Dec 1 18:59:03
PST 2019; root:xnu-4903.278.19~1/RELEASE_X86_64 x86_64
****************************************************
C compiler: gcc
C compiler version:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/4.2.1
Apple clang version 11.0.0 (clang-1100.0.33.8)
Target: x86_64-apple-darwin18.7.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
****************************************************
Package 'brial' is currently not installed
Uninstalling 'brial' with legacy uninstaller
Cleaning out old PolyBoRi and BRiAl installations
Configuring brial-1.2.5
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... none
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/local/bin:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/local/bin:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
********************************************************************************
Error configuring brial-1.2.5 See the file
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src/config.log
for details.
********************************************************************************
real 0m12.659s
user 0m5.422s
sys 0m5.498s
************************************************************************
Error installing package brial-1.2.5
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/Applications/sage-9.0/logs/pkgs/brial-1.2.5.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5 and type 'make' or
whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5' &&
'/Applications/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
Found local metadata for brial-1.2.5
Using cached file /Applications/sage-9.0/upstream/brial-1.2.5.tar.bz2
brial-1.2.5
====================================================
Setting up build directory for brial-1.2.5
Finished extraction
No patch files found in ../patches
****************************************************
Host system:
Darwin MATH-2QM1DHGG77 18.7.0 Darwin Kernel Version 18.7.0: Sun Dec 1 18:59:03
PST 2019; root:xnu-4903.278.19~1/RELEASE_X86_64 x86_64
****************************************************
C compiler: gcc
C compiler version:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/c++/4.2.1
Apple clang version 11.0.0 (clang-1100.0.33.8)
Target: x86_64-apple-darwin18.7.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
****************************************************
Package 'brial' is currently not installed
Uninstalling 'brial' with legacy uninstaller
Cleaning out old PolyBoRi and BRiAl installations
Configuring brial-1.2.5
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... none
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/local/bin:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '549304207' is supported by ustar format... no
checking whether GID '1780884004' is supported by ustar format... no
checking how to create a ustar tar archive... none
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-apple-darwin18.7.0
checking host system type... x86_64-apple-darwin18.7.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin18.7.0 file names to
x86_64-apple-darwin18.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin18.7.0 file names to toolchain
format... func_convert_file_noop
checking for ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gcc option to accept ISO C99... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++11 accepts -g... yes
checking dependency style of g++ -std=gnu++11... gcc3
checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
checking for ld used by g++ -std=gnu++11... ld
checking if the linker (ld) is GNU ld... no
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC
checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes
checking if g++ -std=gnu++11 static flag -static works... no
checking if g++ -std=gnu++11 supports -c -o file.o... yes
checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the g++ -std=gnu++11 linker (ld) supports shared libraries...
yes
checking dynamic linker characteristics... darwin18.7.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether g++ -std=gnu++11 supports C++11 features by default... yes
checking for long long... yes
checking size of void *... 8
checking size of int... 4
checking size of long... 8
checking for boostlib >= 1.58.0... yes
checking pkg-config is at least version 0.9.0... ./configure: line 18178:
/usr/lib/pkgconfig:/usr/share/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/local/bin:
No such file or directory
no
checking for m4ri... no
configure: error: in
`/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src':
configure: error: The pkg-config script could not be found or is too old. Make
sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables M4RI_CFLAGS
and M4RI_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
./configure: line 354: sort: No such file or directory
./configure: line 351: sed: No such file or directory
********************************************************************************
Error configuring brial-1.2.5 See the file
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5/src/config.log
for details.
********************************************************************************
real 0m12.674s
user 0m5.407s
sys 0m5.541s
************************************************************************
Error installing package brial-1.2.5
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/Applications/sage-9.0/logs/pkgs/brial-1.2.5.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5 and type 'make' or
whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage-9.0/local/var/tmp/sage/build/brial-1.2.5' &&
'/Applications/sage-9.0/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
