I agree, updating the OS if possible, and/or installing homebrew and python3 from homebrew would be the way to go.
On Monday, May 25, 2020 at 4:37:22 PM UTC-7, Dima Pasechnik wrote: > > Hi Anne, > openssl is a never-ending problem on macOS, and in your case it's made > worse by an old macOS version. > One cannot expect much support and development on macOS 10.12, as it > has reached EOL in 2019. > > One way out would be to install Python 3.7 from cpython, and then Sage > will just use it, without building. > > https://www.python.org/ftp/python/3.7.7/python-3.7.7-macosx10.9.pkg > > (or, alternatively, install Homebrew, then you can use many more > packages from there without building) > > HTH > Dima > > On Tue, May 26, 2020 at 12:11 AM Anne Schilling > <anne1.s...@gmail.com <javascript:>> wrote: > > > > Hi Dima, > > > > Thank you! I have run make distclean and now it gets stuck here: > > > > https://www.math.ucdavis.edu/~anne/python3-3.7.3.p1.log > > > > It looks like there is a problem with openssl. > > > > Any idea? > > > > Anne > > > > On Monday, May 25, 2020 at 10:52:29 AM UTC-7, Dima Pasechnik wrote: > >> > >> Hi Anne, > >> it appears from your config.log that you did not do > >> > >> make distclean > >> > >> moreover, it says that R is already installed, and should not get > reinstalled. > >> > >> Does Sage start? I guess not. > >> If before the latest git pull you had an oldish Sage (closer to 9.0 > than to 9.1) > >> it appears that the build system is totally confused. > >> So you most probably need to do distclean. > >> > >> HTH > >> Dima > >> > >> > >> > >> On Mon, 25 May 2020, 17:28 Anne Schilling, <anne1.s...@gmail.com> > wrote: > >>> > >>> Hi Dima, > >>> > >>> I pulled the changes using git in the master branch and started make > (or make distclean). > >>> This is running on MacOS 10.12.6 . > >>> > >>> https://www.math.ucdavis.edu/~anne/config.log > >>> https://www.math.ucdavis.edu/~anne/r-3.6.2.p0.log > >>> https://www.math.ucdavis.edu/~anne/dochtml.log > >>> > >>> Thank you! > >>> > >>> Anne > >>> > >>> On Monday, May 25, 2020 at 1:29:33 AM UTC-7, Dima Pasechnik wrote: > >>>> > >>>> On Mon, May 25, 2020 at 7:44 AM Anne Schilling > >>>> <anne1.s...@gmail.com> wrote: > >>>> > > >>>> > > >>>> > > >>>> > On Sunday, May 24, 2020 at 10:27:19 PM UTC-7, Matthias Koeppe > wrote: > >>>> >> > >>>> >> Hi Anne, > >>>> >> > >>>> >> On Sunday, May 24, 2020 at 9:40:42 PM UTC-7, Anne Schilling wrote: > >>>> >>> > >>>> >>> Downloading the Sage mirror list > >>>> >>> CRITICAL [mirror_list|_load:91]: Downloaded mirror list has > syntax error: error code: 1010 > >>>> >>> Searching fastest mirror > >>>> >>> ERROR [mirror_list|_rank_mirrors:145]: Could not reach any mirror > directly and no proxy set > >>>> >> > >>>> >> > >>>> >> Here's a workaround: > >>>> >> > >>>> >> echo '["http://files.sagemath.org/";]' > upstream/mirror_list > >>>> >> > >>>> >> > >>>> >> I hope this helps, > >>>> >> Matthias > >>>> > > >>>> > > >>>> > Thank you, that got me a lot further. But now it is stuck here: > >>>> > > >>>> > [matplotlib-2.2.5] running install_egg_info > >>>> > [matplotlib-2.2.5] running egg_info > >>>> > [matplotlib-2.2.5] writing lib/matplotlib.egg-info/PKG-INFO > >>>> > [matplotlib-2.2.5] writing dependency_links to > lib/matplotlib.egg-info/dependency_links.txt > >>>> > [matplotlib-2.2.5] writing namespace_packages to > lib/matplotlib.egg-info/namespace_packages.txt > >>>> > [matplotlib-2.2.5] writing requirements to > lib/matplotlib.egg-info/requires.txt > >>>> > [matplotlib-2.2.5] writing top-level names to > lib/matplotlib.egg-info/top_level.txt > >>>> > [matplotlib-2.2.5] reading manifest file > 'lib/matplotlib.egg-info/SOURCES.txt' > >>>> > [matplotlib-2.2.5] reading manifest template 'MANIFEST.in' > >>>> > [matplotlib-2.2.5] writing manifest file > 'lib/matplotlib.egg-info/SOURCES.txt' > >>>> > [matplotlib-2.2.5] Copying lib/matplotlib.egg-info to > /Applications/sage/local/var/tmp/sage/build/matplotlib-2.2.5/inst/Applications/sage/local/lib/python3.7/site-packages/matplotlib-2.2.5-py3.7.egg-info > > > >>>> > [matplotlib-2.2.5] Installing > /Applications/sage/local/var/tmp/sage/build/matplotlib-2.2.5/inst/Applications/sage/local/lib/python3.7/site-packages/matplotlib-2.2.5-py3.7-nspkg.pth > > > >>>> > [matplotlib-2.2.5] running install_scripts > >>>> > [matplotlib-2.2.5] writing list of installed files to > '/private/var/folders/sq/gx2hlzhj315g48j_8r39s8p80000gp/T/pip-record-rmt5izi9/install-record.txt' > > > >>>> > [matplotlib-2.2.5] Running setup.py install for matplotlib: > finished with status 'done' > >>>> > [matplotlib-2.2.5] Removing source in > /private/var/folders/sq/gx2hlzhj315g48j_8r39s8p80000gp/T/pip-req-build-l19fxrx8 > > > >>>> > [matplotlib-2.2.5] Successfully installed matplotlib-2.2.5 > >>>> > [matplotlib-2.2.5] Cleaning up... > >>>> > [matplotlib-2.2.5] Removed build tracker > '/private/var/folders/sq/gx2hlzhj315g48j_8r39s8p80000gp/T/pip-req-tracker-rxz0bq3j' > > > >>>> > [matplotlib-2.2.5] > >>>> > [matplotlib-2.2.5] real 6m10.218s > >>>> > [matplotlib-2.2.5] user 0m35.266s > >>>> > [matplotlib-2.2.5] sys 0m4.548s > >>>> > [matplotlib-2.2.5] Copying package files from temporary location > /Applications/sage/local/var/tmp/sage/build/matplotlib-2.2.5/inst to > /Applications/sage/local > >>>> > [matplotlib-2.2.5] Successfully installed matplotlib-2.2.5 > >>>> > [matplotlib-2.2.5] Deleting temporary build directory > >>>> > [matplotlib-2.2.5] > /Applications/sage/local/var/tmp/sage/build/matplotlib-2.2.5 > >>>> > [matplotlib-2.2.5] Finished installing matplotlib-2.2.5.spkg > >>>> > make[2]: *** [all-start] Error 2 > >>>> > > >>>> > real 48m47.186s > >>>> > user 162m58.074s > >>>> > sys 27m3.413s > >>>> > *************************************************************** > >>>> > Error building Sage. > >>>> > > >>>> > The following package(s) may have failed to build (not necessarily > >>>> > during this run of 'make all-start'): > >>>> > > >>>> > * package: r-3.6.2.p0 > >>>> > last build time: May 24 23:28 > >>>> > log file: /Applications/sage/logs/pkgs/r-3.6.2.p0.log > >>>> > build directory: > /Applications/sage/local/var/tmp/sage/build/r-3.6.2.p0 > >>>> > > >>>> > * documentation: dochtml > >>>> > last build time: May 24 22:43 > >>>> > log file: /Applications/sage/logs/pkgs/../dochtml.log > >>>> > > >>>> > It is safe to delete any log files and build directories, but they > >>>> > contain information that is helpful for debugging build problems. > >>>> > WARNING: If you now run 'make' again, the build directory of the > >>>> > same version of the package will, by default, be deleted. Set the > >>>> > environment variable SAGE_KEEP_BUILT_SPKGS=yes to prevent this. > >>>> > > >>>> > make[1]: *** [all-start] Error 1 > >>>> > make: *** [all] Error 2 > >>>> > > >>>> > I can provide the log files if necessary. > >>>> > > >>>> > >>>> Are you building from scratch? > >>>> What is your setup? (Sage nowadays supports building with Homebrew > packages) > >>>> > >>>> Yes, naturally, without the log files for R and dochtml one cannot > say > >>>> what went wrong. > >>>> Also, the top-level config.log woud be useful. > >>>> > >>>> Best > >>>> Dima > >>>> > >>>> > Best, > >>>> > > >>>> > Anne > >>>> > > >>>> > -- > >>>> > You received this message because you are subscribed to the Google > Groups "sage-devel" group. > >>>> > To unsubscribe from this group and stop receiving emails from it, > send an email to sage-...@googlegroups.com. > >>>> > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/9c5525a4-9486-41f9-80f9-8c064fc3be5d%40googlegroups.com. > > > >>> > >>> -- > >>> You received this message because you are subscribed to the Google > Groups "sage-devel" group. > >>> To unsubscribe from this group and stop receiving emails from it, send > an email to sage-...@googlegroups.com. > >>> To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/33360eae-7de2-4cfb-8118-36406ec36d7b%40googlegroups.com. > > > > > > -- > > You received this message because you are subscribed to the Google > Groups "sage-devel" group. > > To unsubscribe from this group and stop receiving emails from it, send > an email to sage-...@googlegroups.com <javascript:>. > > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/c89f6a23-13ae-4193-9f9d-5d35a7c1b51f%40googlegroups.com. > > > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/7169067a-c0c6-4216-a57b-f9503dd12820%40googlegroups.com.
