Thanks John and Francois, that indeed solved the problem.

I still have to get used a bit to the new workflow and previous time sage 
-b just worked, but it's good to know that I have to use make instead.

Le mercredi 2 avril 2014 11:12:04 UTC+2, François a écrit :
>
> You should have used “make” pynac has to be updated (the source of your 
> problem) 
> and sage -b won’t do that. 
>
> Francois 
>
> On 2/04/2014, at 22:00, Maarten Derickx <m.derick...@gmail.com<javascript:>> 
> wrote: 
>
> > I really like the new git based workflow. It makes it much faster to 
> update my dev version of sage, however this update failed.  Using OS X 
> 10.9.2 I get: 
> > 
> > lll:sage maarten$ sage -b 
> > scons: `install' is up to date. 
> > Updating Cython code.... 
> > Finished compiling Cython code (time = 5.498483181 seconds) 
> > running install 
> > running build 
> > running build_py 
> > running build_ext 
> > building 'sage.symbolic.function' extension 
> > building 'sage.symbolic.ring' extension 
> > building 'sage.symbolic.constants_c' extension 
> > building 'sage.symbolic.expression' extension 
> > building 'sage.symbolic.getitem' extension 
> > building 'sage.symbolic.pynac' extension 
> > building 'sage.symbolic.substitution_map' extension 
> > building 'sage.tests.cython' extension 
> > Executing 8 commands (using 1 thread) 
> > gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall 
> -I/Applications/sage/local/include -I/Applications/sage/local/include/csage 
> -I/Applications/sage/src -I/Applications/sage/src/sage/ext 
> -I/Applications/sage/local/include -I/Applications/sage/local/include/csage 
> -I/Applications/sage/src -I/Applications/sage/src/sage/ext 
> -I/Applications/sage/local/include/python2.7 -c sage/symbolic/function.cpp 
> -o build/temp.macosx-10.9-x86_64-2.7/sage/symbolic/function.o 
> -fno-strict-aliasing -w 
> > In file included from sage/symbolic/function.cpp:350:0: 
> > sage/symbolic/ginac_wrap.h:12:36: fatal error: pynac/extern_templates.h: 
> No such file or directory 
> > compilation terminated. 
> > error: command 'gcc' failed with exit status 1 
> > gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall 
> -I/Applications/sage/local/include -I/Applications/sage/local/include/csage 
> -I/Applications/sage/src -I/Applications/sage/src/sage/ext 
> -I/Applications/sage/local/include -I/Applications/sage/local/include/csage 
> -I/Applications/sage/src -I/Applications/sage/src/sage/ext 
> -I/Applications/sage/local/include/python2.7 -c sage/symbolic/ring.cpp -o 
> build/temp.macosx-10.9-x86_64-2.7/sage/symbolic/ring.o -fno-strict-aliasing 
> -w 
> > In file included from sage/symbolic/ring.cpp:349:0: 
> > sage/symbolic/ginac_wrap.h:12:36: fatal error: pynac/extern_templates.h: 
> No such file or directory 
> > compilation terminated. 
> > 
> > 
> > Le mercredi 2 avril 2014 02:09:20 UTC+2, Volker Braun a écrit : 
> > Get it from the "develop" git branch or the source tarball at 
> http://boxen.math.washington.edu/home/release/sage-6.2.beta6/sage-6.2.beta6.tar.gz
>  
> > 
> > Mini-changelog: 
> > 
> > 12bbca0 Updated Sage version to 6.2.beta6 
> > a473d6f Trac #14800: Implement Pynac->Python callback for 
> function::subs() 
> > cdfaa4a Trac #15723: move CryptoMiniSat SPKG to build/pkgs 
> > 1039e08 Trac #11840: 
> sage.symbolic.expression.Expression.collect_common_factors has no 
> documentation 
> > 5864971 Trac #15138: BuiltinFunction._is_registered is giving false 
> negatives 
> > 696140c Trac #14816: Implement absolute order for coxeter groups 
> > d40939f Trac #15870: (LaTeX)-typesetting of multi-character variables 
> wrong 
> > a113723 Trac #15998: Restore some documentation and doctests and a 
> function removed with #15466 
> > 76998bf Trac #15928: Typesetting errors in docstring of 
> FiniteStateMachine._latex_transition_label_ 
> > f4ce665 Trac #13917: IndependentSets class 
> > b5cca4c Trac #15288: Balanced Incomplete Block Designs with k=4 
> > 1d28062 Trac #16024: incorrect deleting of states in finite state 
> machine 
> > b2d98f2 Trac #16021: remove deprecated code in rings/ 
> > fe97289 Trac #16019: Connected components for immutable digraphs does 
> not work 
> > 7ea77e7 Trac #15992: Python 3 preparation: Change backticks into repr() 
> > cb8562e Trac #15991: Python 3 preparation: Rename sys.maxint to 
> sys.maxsize 
> > 317e5ff Trac #12892: Toric fibration morphisms 
> > 416f22b Trac #10745: bug in elliptic curve gens() 
> > b78a148 Trac #16016: FiniteStateMachine.__and__ calls intersection and 
> FiniteStateMachine.__or__ calls union. 
> > 0fb48b1 Trac #15969: New class method: Kazhdan-Lusztig R_tilde 
> polynomial 
> > e231e52 Trac #14050: Cleaning up docs in Finite Coxeter Groups 
> > 10facf2 Trac #16028: bad formatting in the doc of the genus method for 
> graphs 
> > 16f8906 Trac #15997: a typo in stirling1 numbers 
> > d4d9b99 Trac #16032: Bug in IncidenceStructure.dual_design 
> > b019163 Trac #10735: Simon 2-descent only returns an upper bound on the 
> 2-Selmer rank 
> > 527c91b Trac #15988: Python 3 preparation: Add missing parentheses in 
> list comprension 
> > 9d3d9a4 Trac #15982: Python 3 preparation: Change the syntax of the 
> except clause 
> > 367ab0c Trac #15949: Involutions on NSym and QSym part II 
> > f0c8b3f Trac #15705: functions PowerSeries.ogf() and egf() named wrong 
> > f4ae33f Trac #15287: Orthogonal Arrays 
> > f663334 Trac #9322: long time in simon_two_descent for elliptic curves 
> > 27de53f Trac #16009: Compute rank of elliptic curve defined over 
> relative number field 
> > 16069ee Trac #11907: Modify tutorials: no more 'examples' directory 
> > c738289 Trac #16011: Fix _torsion_bound() for elliptic curves over 
> relative number fields 
> > c31b2bb Trac #15351: import_statements sometimes fails 
> > e41c9db Trac #16027: Implement q-dimension for classical and KR crystals 
> > 3b73d16 Trac #14780: allow embedding python tuples in SR 
> > 1b6930b Trac #16022: simon_two_descent sometimes gives wrong answers 
> > 72e748f Trac #16015: dateutils requires setuptools 
> > e439592 Trac #16002: matplotlib-1.3.1 does not install 
> > 47619bc Trac #15972: IPython ProfileDirError if IPython was never run 
> > e046d7a Trac #15942: fix md5 in sage-spkg 
> > 9db8c5c Updated Sage version to 6.2.beta5 
> > 
> > 
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