If it is, it is not the only one, see

    https://trac.sagemath.org/ticket/25332

Vincent

On 10/05/2018 10:21, François Bissey wrote:
It is probably an oversight or a corner case in 
https://trac.sagemath.org/ticket/20382
Do open a ticket for that.

François

On 10/05/2018, at 20:15, Emmanuel Charpentier <emanuel.charpent...@gmail.com> 
wrote:

On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives me three 
errors :

sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed out
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
sage -t --long src/sage/features/gap.py  # 1 doctest failed

The first one is transient (i.e. passes when ran standalone), the other two are permanent 
(and persist even after "sage -f database_gap", see below) :

charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
src/sage/groups/perm_gps/permgroup.py
Forcing sage-location, probably because a new package was installed.
Cleaning up, do not interrupt this.
Done cleaning.
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-39-e77fca6f.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/groups/perm_gps/permgroup.py
**********************************************************************
File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
Failed example:
     G.group_primitive_id()    # optional - database_gap
Exception raised:
     Traceback (most recent call last):
       File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 562, in _run
         self.compile_and_execute(example, compiler, test.globs)
       File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 972, in compile_and_execute
         exec(compiled, globs)
       File "<doctest 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id[1]>", line 1, in 
<module>
         G.group_primitive_id()    # optional - database_gap
       File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
 line 1775, in group_primitive_id
         GapPackage("prim", spkg="database_gap").require()
       File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
 line 158, in require
         raise FeatureNotPresentError(self, presence.reason, 
presence.resolution)
     FeatureNotPresentError: GAP package prim is not available.
     `TestPackageAvailability("prim")` evaluated to `fail` in GAP.
     To install GAP package prim you can try to run 'sage -i database_gap'.
**********************************************************************
1 item had failures:
    1 of   7 in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
     [832 tests, 1 failure, 9.92 s]
----------------------------------------------------------------------
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
----------------------------------------------------------------------
Total time for all tests: 10.1 seconds
     cpu time: 6.6 seconds
     cumulative wall time: 9.9 seconds
charpent@asus16-ec:/usr/local/sage-8$ sage -t --long src/sage/features/gap.py
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-58-0245b4d8.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/features/gap.py
**********************************************************************
File "src/sage/features/gap.py", line 41, in 
sage.features.gap.GapPackage._is_present
Failed example:
     GapPackage("prim", spkg="database_gap").is_present()  # optional: 
database_gap
Expected:
     FeatureTestResult('GAP package prim', True)
Got:
     FeatureTestResult('GAP package prim', False)
**********************************************************************
1 item had failures:
    1 of   3 in sage.features.gap.GapPackage._is_present
     [12 tests, 1 failure, 0.50 s]
----------------------------------------------------------------------
sage -t --long src/sage/features/gap.py  # 1 doctest failed
----------------------------------------------------------------------
Total time for all tests: 0.5 seconds
     cpu time: 0.5 seconds
     cumulative wall time: 0.5 seconds

The reinstallation of database_gap does not give error or warning.

In both cases, the problem seems to be bound to the 'prim' package of GAP.

Summarily reported againtst database_gap in Trac#25323.

HTH,

--
Emmanuel Charpentier

Le mercredi 9 mai 2018 20:44:17 UTC+2, Volker Braun a écrit :
As always, you can get the latest beta version from the "develop" git branch. 
Alternatively, the self-contained source tarball is at 
http://www.sagemath.org/download-latest.html


8bdc326ba5 (tag: 8.3.beta0, trac/develop) Updated SageMath version to 8.3.beta0
537a270597 Trac #24921: Add optional package "ninja_build" (build system for 
polymake)
31df4df870 Trac #24909: Boruvka algorithm for MST
ad537e4b5f Trac #24903: optional package autotools fail to build
500d2feb38 Trac #24626: More substantial implementation of matrices over 
complex ball fields
96987ac2a5 Trac #25076: Fix Matrix_gfpn_dense * int
80adc4fc7a Trac #24878: Improve function? docstring
1968b08e11 Trac #24848: Implement join of polytopes
4a4830018f Trac #24839: py3: an issue about dict iterators
ad6ee1bb25 Trac #24742: New MatrixArgs object to deal with constructing matrices
13fd23bb80 Trac #24370: Riemann surfaces: algebraization and automorphisms
9fb25e50bd Trac #19506: Implement cellular algebras
59c99eca6a Trac #16823: Implement the free Lie algebra
70e163d515 Trac #24835: Change error message in construction of polyhedron 
object
e498ec4415 Trac #24788: Multiplication of the Gram Matrix
2c0ee06538 Trac #24680: Cleanup some deprecated functions (matrix and coding)
30c21d31cf Trac #24662: Upgrade scipoptsuite to 5.0.1
0c9519f6c5 Trac #23665: Implement Frobenius formula for Hecke algebra characters
d2deec20a0 Trac #24645: Support for spkg-postinst scripts
68e8076fcc Trac #24644: Use $SAGE_SUDO when copying files from SAGE_DESTDIR to 
SAGE_LOCAL
ea439259c1 Trac #24638: Fix OpenBLAS build on SPARC
7e5f242d33 Trac #24623: Euclidean spaces and vector calculus
dce704249c Trac #24585: r_jupyter package is broken
c46927cb09 Trac #24577: is_genus for torsion quadratic modules
0bdd6f9d39 Trac #24576: Brown invariant of a TorsionQuadraticModule
5cc1dd4967 Trac #24564: Gluing of lattices
af11d43628 Trac #24559: py3: better backwards-compatibility for Python longs
3307f67637 Trac #24541: Fix Cone.orthogonal_sublattice
52ab02ee18 Trac #24508: py3: problems with tests that use random_element
87dcf8209d Trac #24481: Replace PARI stackwarn.patch with upstream version
9dabe7b561 Trac #24433: Speed up p-adic Gamma by caching Dwork expansion 
coefficients
0c6181d7b3 Trac #24416: GeneralDiscreteDistribution broken when entries >= 
2^1024
6aa51476fe Trac #24323: 'BrauerAlgebra' has no attribute 'options'
e4ec2f6209 Trac #24314: rootfinding for polynomials with complex ball 
coefficients using arb
79c3ec00ee Trac #24312: py3: fixes to sage.misc.sageinspect
14669b2e42 Trac #24152: Bug when converting a Sage polyhedron into Polymake 
pexpect
68fd029608 Trac #24130: Reverse plane partitions and Hillman-Grassl
24c396a1de Trac #24129: Complete the standard bijections on the symmetric group
b3ce0ca72f Trac #23733: Stop supporting SAGE64 and CFLAG64
94e5a73e75 Trac #23450: Smith form of p-adic matrices
5d8a91b23c Trac #23353: Upgrade to gfan 0.6.2
d8c7427822 Trac #23344: p-adic square root
577a9ce597 Trac #22984: Upgrade normaliz to 3.5.3 and pynormaliz to 1.12
cd4ad379e2 Trac #22604: autodoc unforking again
9d10e48944 Trac #22572: Add a thematic tutorial on the polyhedron class
a24a9c6b30 Trac #22243: Make doctests not depend on the boost version
fdf74cc00b Trac #21022: version information in sage.__version__
417875c300 Trac #20382: Replace is_package_installed with Features
b4829dabec Trac #19270: Matrix_integer_sparse object has no attribute 'gap'
82025348ef Trac #17340: can't plot immutable graphs
b1a0575489 Trac #15729: Graphics3d with fractional opacity will not save image
7926af1fa4 Trac #10577: Deepcopy fails on vectorspaces over GF(2) with 
inner_product_matrix specified
3c408bc16f Trac #7589: bug in coercion and cyclotomic fields
7d35dbf26c Trac #25118: gfan fails when compiled with XCode 9.3
3c0ce4d54e Trac #24880: gcd is not commutative (on rationals)
0763c7217e Trac #24605: Upgrading from older Python versions doesn't work
eacca53f0c Trac #24440: Infinite loop from converting to QQbar
f29aa2c5e5 Trac #25221: If gcc is built, 'make' and then 'make' again rebuilds 
packages needlessly
5edef8b2fd Trac #25189: Upgrade cysignals to version 1.7.1
854f9764d1 (tag: 8.2, trac/master) Updated SageMath version to 8.2


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