On Thu, Jun 24, 2021 at 12:46 PM Sébastien Labbé <sla...@gmail.com> wrote: > > Doing make distclean and using system's python3.8 with ./configure > --with-python=/usr/bin/python3.8 avoided my issue with compilation of > python3.9.5. > > On Ubuntu 18.04, make ptestall with following optional and external packages > gives: > > Using > --optional=4ti2,build,ccache,cryptominisat,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,lidia,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg > > ---------------------------------------------------------------------- > sage -t --long --random-seed=0 > src/sage/combinat/designs/incidence_structures.py # 1 doctest failed > sage -t --long --random-seed=0 src/sage/databases/oeis.py # 2 doctests failed > sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py # 2 doctests > failed > sage -t --long --random-seed=0 src/sage/graphs/graph.py # 3 doctests failed > sage -t --long --random-seed=0 src/sage/misc/package.py # 1 doctest failed > sage -t --long --random-seed=0 src/sage/modules/fg_pid/fgp_module.py # 2 > doctests failed > sage -t --long --random-seed=0 src/sage/tests/cmdline.py # 1 doctest failed > ---------------------------------------------------------------------- > External software detected for doctesting: > ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc > > > Rerunning failed tests, I get the same. Failures are copied below. > > Follow up at https://trac.sagemath.org/ticket/25536 for issues involving > optional packages. > > Running doctests with ID 2021-06-24-13-28-43-06b7e682. > Git branch: develop > Using > --optional=4ti2,build,ccache,cryptominisat,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,lidia,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg > External software to be detected: > cplex,ffmpeg,graphviz,gurobi,imagemagick,internet,latex,macaulay2,magma,maple,mathematica,matlab,octave,pandoc,rubiks,scilab > Doctesting entire Sage library. > Only doctesting files that failed last test. > Doctesting 7 files using 8 threads. > sage -t --long --random-seed=0 src/sage/modules/fg_pid/fgp_module.py > ********************************************************************** > File "src/sage/modules/fg_pid/fgp_module.py", line 1274, in > sage.modules.fg_pid.fgp_module.FGP_Module_class.coordinate_vector > Failed example: > Q.coordinate_vector(Q.0 - Q.1) > Expected: > (1, -1) > Got: > (1, 47) > ********************************************************************** > File "src/sage/modules/fg_pid/fgp_module.py", line 1294, in > sage.modules.fg_pid.fgp_module.FGP_Module_class.coordinate_vector > Failed example: > Q.coordinate_vector(x) > Expected: > (0, -1) > Got: > (0, 11) > ********************************************************************** > 1 item had failures: > 2 of 23 in > sage.modules.fg_pid.fgp_module.FGP_Module_class.coordinate_vector > 0 tests not run because we ran out of time > [397 tests, 2 failures, 2.29 s] > fgp_module errors are fixed in #32048
> > > sage -t --long --random-seed=0 > src/sage/combinat/designs/incidence_structures.py > ********************************************************************** > File "src/sage/combinat/designs/incidence_structures.py", line 2027, in > sage.combinat.designs.incidence_structures.IncidenceStructure.coloring > Failed example: > len(designs.steiner_triple_system(7).coloring()) > Expected: > 3 > Got: > 2 > ********************************************************************** > 1 item had failures: > 1 of 6 in > sage.combinat.designs.incidence_structures.IncidenceStructure.coloring > 8 gap_packages tests not run > 3 not tested tests not run > 0 tests not run because we ran out of time > [339 tests, 1 failure, 1.57 s] > > > > sage -t --long --random-seed=0 src/sage/graphs/graph.py > ********************************************************************** > File "src/sage/graphs/graph.py", line 4236, in > sage.graphs.graph.Graph.has_homomorphism_to > Failed example: > g.has_homomorphism_to(graphs.CycleGraph(4)) is not False > Expected: > False > Got: > True > ********************************************************************** > File "src/sage/graphs/graph.py", line 4631, in sage.graphs.graph.Graph.minor > Failed example: > L = g.minor(graphs.CompleteGraph(3)) > Expected: > Traceback (most recent call last): > ... > ValueError: This graph has no minor isomorphic to H ! > Got: > <BLANKLINE> > ********************************************************************** > File "src/sage/graphs/graph.py", line 5841, in > sage.graphs.graph.Graph.topological_minor > Failed example: > g.topological_minor(graphs.CycleGraph(3)) > Expected: > False > Got: > Subgraph of (Subgraph of (RandomGNP(15,0.300000000000000))): Graph on 0 > vertices > ********************************************************************** > 3 items had failures: > 1 of 10 in sage.graphs.graph.Graph.has_homomorphism_to > 1 of 14 in sage.graphs.graph.Graph.minor > 1 of 7 in sage.graphs.graph.Graph.topological_minor > 2 mcqd tests not run > 2 not tested tests not run > 13 python_igraph tests not run > 0 tests not run because we ran out of time > [1216 tests, 3 failures, 21.32 s] > > > > sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py > ********************************************************************** > File "src/sage/graphs/generic_graph.py", line 8879, in > sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow > Failed example: > h = g.nowhere_zero_flow(k=3) > Expected: > Traceback (most recent call last): > ... > EmptySetError: the problem has no feasible solution > Got: > <BLANKLINE> > ********************************************************************** > File "src/sage/graphs/generic_graph.py", line 9500, in > sage.graphs.generic_graph.GenericGraph.disjoint_routed_paths > Failed example: > p1,p2 = g.disjoint_routed_paths([((0, 0), (4, 4)), ((0, 4), (4, 0))]) > Expected: > Traceback (most recent call last): > ... > EmptySetError: the disjoint routed paths do not exist > Got: > <BLANKLINE> > ********************************************************************** > 2 items had failures: > 1 of 5 in sage.graphs.generic_graph.GenericGraph.disjoint_routed_paths > 1 of 29 in sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow > 17 bliss tests not run > 6 not tested tests not run > 39 python_igraph tests not run > 0 tests not run because we ran out of time > [3535 tests, 2 failures, 37.33 s] > > > > sage -t --long --random-seed=0 src/sage/tests/cmdline.py > ********************************************************************** > File "src/sage/tests/cmdline.py", line 607, in > sage.tests.cmdline.test_executable > Failed example: > err # optional - internet > Expected: > '' > Got: > > '/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/misc/package.py:115: > UserWarning: failed to fetch the version of pkg=\'ore_algebra\' at > https://pypi.org/pypi/ore_algebra/json\n warnings.warn("failed to fetch the > version of pkg={!r} at {}".format(pkg, url))\n' > ********************************************************************** > 1 item had failures: > 1 of 257 in sage.tests.cmdline.test_executable > 3 gdb tests not run > 6 py2 tests not run > 4 r tests not run > 6 sagenb tests not run > 0 tests not run because we ran out of time > [256 tests, 1 failure, 34.50 s] > sage -t --long --random-seed=0 src/sage/databases/oeis.py > ********************************************************************** > File "src/sage/databases/oeis.py", line 1506, in > sage.databases.oeis.OEISSequence.references > Failed example: > w.references() # optional -- internet > Expected: > 0: A. H. Beiler, Recreations in the Theory of Numbers, Dover, NY, 1964, > p. 52. > 1: C. Clawson, Mathematical Mysteries, Plenum Press, 1996, p. 180. > 2: R. Crandall and C. Pomerance, Prime Numbers: A Computational > Perspective, Springer, NY, 2001; see p. 29. > 3: G. H. Hardy and E. M. Wright, An Introduction to the Theory of > Numbers, 5th ed., Oxford Univ. Press, 1979, th. 80. > ... > Got: > 0: N. G. W. H. Beeger, On the Congruence (p-1)! == -1 (mod p^2), > Messenger of Mathematics, Vol. 49 (1920), pp. 177-178. > 1: Albert H. Beiler, Recreations in the Theory of Numbers, Dover, NY, > 1964, p. 52. > 2: Calvin C. Clawson, Mathematical Mysteries, Plenum Press, 1996, p. 180. > 3: Richard Crandall and Carl Pomerance, Prime Numbers: A Computational > Perspective, Springer, NY, 2001; see p. 29. > 4: G. H. Hardy and E. M. Wright, An Introduction to the Theory of > Numbers, 5th ed., Oxford Univ. Press, 1979, th. 80. > 5: Paulo Ribenboim, My Numbers, My Friends: Popular Lectures on Number > Theory, Springer Science & Business Media, 2000, ISBN 0-387-98911-0. > 6: Paulo Ribenboim, The Book of Prime Number Records. Springer-Verlag, > NY, 2nd ed., 1989, p. 277. > 7: N. J. A. Sloane and Simon Plouffe, The Encyclopedia of Integer > Sequences, Academic Press, 1995 (includes this sequence). > 8: Ilan Vardi, Computational Recreations in Mathematica. Addison-Wesley, > Redwood City, CA, 1991, p. 73. > 9: David Wells, The Penguin Dictionary of Curious and Interesting > Numbers. Penguin Books, NY, 1986, 163. > ********************************************************************** > File "src/sage/databases/oeis.py", line 1513, in > sage.databases.oeis.OEISSequence.references > Failed example: > _[0] # optional -- internet > Expected: > 'A. H. Beiler, Recreations in the Theory of Numbers, Dover, NY, 1964, p. > 52.' > Got: > 'N. G. W. H. Beeger, On the Congruence (p-1)! == -1 (mod p^2), Messenger > of Mathematics, Vol. 49 (1920), pp. 177-178.' > ********************************************************************** > 1 item had failures: > 2 of 6 in sage.databases.oeis.OEISSequence.references > 5 webbrowser tests not run > 0 tests not run because we ran out of time > [290 tests, 2 failures, 38.95 s] > > > > sage -t --long --random-seed=0 src/sage/misc/package.py > ********************************************************************** > File "src/sage/misc/package.py", line 101, in > sage.misc.package.pip_remote_version > Failed example: > pip_remote_version(nap, pypi_url=pypi, ignore_URLError=False) # optional > - internet > Expected: > Traceback (most recent call last): > ... > HTTPError: HTTP Error 404: Not Found > Got: > <BLANKLINE> > Traceback (most recent call last): > File "/usr/lib/python3.8/urllib/request.py", line 1317, in do_open > h.request(req.get_method(), req.selector, req.data, headers, > File "/usr/lib/python3.8/http/client.py", line 1230, in request > self._send_request(method, url, body, headers, encode_chunked) > File "/usr/lib/python3.8/http/client.py", line 1276, in _send_request > self.endheaders(body, encode_chunked=encode_chunked) > File "/usr/lib/python3.8/http/client.py", line 1225, in endheaders > self._send_output(message_body, encode_chunked=encode_chunked) > File "/usr/lib/python3.8/http/client.py", line 1004, in _send_output > self.send(msg) > File "/usr/lib/python3.8/http/client.py", line 944, in send > self.connect() > File "/usr/lib/python3.8/http/client.py", line 915, in connect > self.sock = self._create_connection( > File "/usr/lib/python3.8/socket.py", line 807, in create_connection > raise err > File "/usr/lib/python3.8/socket.py", line 796, in create_connection > sock.connect(sa) > TimeoutError: [Errno 110] Connection timed out > <BLANKLINE> > During handling of the above exception, another exception occurred: > <BLANKLINE> > Traceback (most recent call last): > File > "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py", > line 714, in _run > self.compile_and_execute(example, compiler, test.globs) > File > "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py", > line 1133, in compile_and_execute > exec(compiled, globs) > File "<doctest sage.misc.package.pip_remote_version[4]>", line 1, in > <module> > pip_remote_version(nap, pypi_url=pypi, ignore_URLError=False) # > optional - internet > File > "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/misc/package.py", > line 109, in pip_remote_version > f = urlopen(url) > File "/usr/lib/python3.8/urllib/request.py", line 222, in urlopen > return opener.open(url, data, timeout) > File "/usr/lib/python3.8/urllib/request.py", line 525, in open > response = self._open(req, data) > File "/usr/lib/python3.8/urllib/request.py", line 542, in _open > result = self._call_chain(self.handle_open, protocol, protocol + > File "/usr/lib/python3.8/urllib/request.py", line 502, in _call_chain > result = func(*args) > File "/usr/lib/python3.8/urllib/request.py", line 1346, in http_open > return self.do_open(http.client.HTTPConnection, req) > File "/usr/lib/python3.8/urllib/request.py", line 1320, in do_open > raise URLError(err) > urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> > ********************************************************************** > 1 item had failures: > 1 of 6 in sage.misc.package.pip_remote_version > 2 beautifulsoup4 tests not run > 1 not tested test not run > 0 tests not run because we ran out of time > [57 tests, 1 failure, 278.08 s] > > > > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-release+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-release/2c162446-75d0-47d3-9220-9413e43ff044n%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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