both meson and meson_python may potentially come from the system (homebrew
in your case).
Make sure they are up to date, and you don't have these packages installed
in Sage.
And run ./configure
Perhaps the whole homebrew must be reinstated after an OS update, too.
On Sun, 24 Sept 2023, 03:07 John H Palmieri, <jhpalmier...@gmail.com> wrote:
> Building Sage's own gfortran worked to build scipy (and this is an
> argument to keep the gfortran package around, by the way).
>
> Alternatively, building all of scipy's dependencies and then using `./sage
> --python3 -m pip install scipy` also seems to have worked. I then "touch"ed
> the appropriate file to convince Sage that scipy had built, and the rest of
> the build succeeded, except for some extra warnings during doctests: "ld:
> warning: duplicate -rpath [...SAGE_ROOT/local/lib...] ignored"
>
> On Saturday, September 23, 2023 at 3:59:40 PM UTC-7 John H Palmieri wrote:
>
>> If by "they" you mean scipy, then: I have no problems building scipy on
>> another OS X machine: an Intel machine running OS X 13.5.2 (rather than
>> 13.6). "xcode-select --version" reports the same for both machines, but I
>> don't know how informative this is. "gfortran --version" says
>>
>> GNU Fortran (Homebrew GCC 13.2.0) 13.2.0
>> Copyright (C) 2023 Free Software Foundation, Inc.
>> This is free software; see the source for copying conditions. There is NO
>> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
>> PURPOSE.
>>
>> and this is the one that scipy finds. On the M2 machine, Sage's scipy
>> built back in August with earlier versions of the OS (probably 13.5.2) and
>> command-line tools and gfortran (13.1.0).
>>
>>
>> On Saturday, September 23, 2023 at 3:34:29 PM UTC-7 Dima Pasechnik wrote:
>>
>>> do they even support gcc/gfortran 13?
>>>
>>> On Sat, 23 Sept 2023, 23:04 John H Palmieri, <jhpalm...@gmail.com>
>>> wrote:
>>>
>>>> Same result if I do `pip3 install scipy --no-binary scipy` (another of
>>>> their suggested ways of building from source). I guess something is broken
>>>> with my fortran compiler, but I don't know how to troubleshoot it.
>>>>
>>>> On Saturday, September 23, 2023 at 2:35:52 PM UTC-7 John H Palmieri
>>>> wrote:
>>>>
>>>>> It didn't work for me. At least directly attempting a scipy build left
>>>>> an intact log file. Any clues about what's broken on this machine?
>>>>>
>>>>> Build started at 2023-09-23T14:31:26.723020
>>>>> Main binary: /Users/palmieri/Downloads/scipy-1.11.2/venv/bin/python3
>>>>> Build Options:
>>>>> -Dprefix=/Users/palmieri/Downloads/scipy-1.11.2/build-install
>>>>> Python system: Darwin
>>>>> The Meson build system
>>>>> Version: 1.2.1
>>>>> Source dir: /Users/palmieri/Downloads/scipy-1.11.2
>>>>> Build dir: /Users/palmieri/Downloads/scipy-1.11.2/build
>>>>> Build type: native build
>>>>> Project name: SciPy
>>>>> Project version: 1.11.2
>>>>> -----------
>>>>> Detecting compiler via: `cc --version` -> 0
>>>>> stdout:
>>>>> Apple clang version 15.0.0 (clang-1500.0.40.1)
>>>>> Target: arm64-apple-darwin22.6.0
>>>>> Thread model: posix
>>>>> InstalledDir: /Library/Developer/CommandLineTools/usr/bin
>>>>> -----------
>>>>> Running command: cc -E -dM -
>>>>> -----
>>>>> -----------
>>>>> Detecting linker via: `cc -Wl,--version` -> 1
>>>>> stderr:
>>>>> ld: unknown options: --version
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> -----------
>>>>> Detecting Apple linker via: `cc -Wl,-v` -> 1
>>>>> stderr:
>>>>> @(#)PROGRAM:ld PROJECT:dyld-1015.7
>>>>> BUILD 18:48:48 Aug 22 2023
>>>>> configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32
>>>>> i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
>>>>> will use ld-classic for: armv6 armv7 armv7s arm64_32 i386 armv6m
>>>>> armv7k armv7m armv7em
>>>>> LTO support using: LLVM version 15.0.0 (static support for 29, runtime
>>>>> is 29)
>>>>> TAPI support using: Apple TAPI version 15.0.0 (tapi-1500.0.12.3)
>>>>> Library search paths:
>>>>> /opt/homebrew/opt/primesieve/lib
>>>>> /opt/homebrew/opt/bdw-gc/lib
>>>>> /opt/homebrew/opt/libpng/lib
>>>>> /opt/homebrew/opt/ntl/lib
>>>>> /opt/homebrew/opt/bzip2/lib
>>>>> /opt/homebrew/opt/readline/lib
>>>>> /opt/homebrew/lib
>>>>> /usr/local/lib
>>>>> Framework search paths:
>>>>> ld: Undefined symbols:
>>>>> _main, referenced from:
>>>>> <initial-undefines>
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> Sanity testing C compiler: cc
>>>>> Is cross compiler: False.
>>>>> Sanity check compiler command line: cc sanitycheckc.c -o
>>>>> sanitycheckc.exe
>>>>> Sanity check compile stdout:
>>>>>
>>>>> -----
>>>>> Sanity check compile stderr:
>>>>>
>>>>> -----
>>>>> Running test binary command:
>>>>>
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/sanitycheckc.exe
>>>>> C compiler for the host machine: cc (clang 15.0.0 "Apple clang version
>>>>> 15.0.0 (clang-1500.0.40.1)")
>>>>> C linker for the host machine: cc ld64 1015.7
>>>>> -----------
>>>>> Detecting linker via: `ar --version` -> 1
>>>>> stderr:
>>>>> usage: ar -d [-TLsv] archive file ...
>>>>> ar -m [-TLsv] archive file ...
>>>>> ar -m [-abiTLsv] position archive file ...
>>>>> ar -p [-TLsv] archive [file ...]
>>>>> ar -q [-cTLsv] archive file ...
>>>>> ar -r [-cuTLsv] archive file ...
>>>>> ar -r [-abciuTLsv] position archive file ...
>>>>> ar -t [-TLsv] archive [file ...]
>>>>> ar -x [-ouTLsv] archive [file ...]
>>>>> -----------
>>>>> -----------
>>>>> Detecting compiler via: `c++ --version` -> 0
>>>>> stdout:
>>>>> Apple clang version 15.0.0 (clang-1500.0.40.1)
>>>>> Target: arm64-apple-darwin22.6.0
>>>>> Thread model: posix
>>>>> InstalledDir: /Library/Developer/CommandLineTools/usr/bin
>>>>> -----------
>>>>> Running command: c++ -E -dM -
>>>>> -----
>>>>> -----------
>>>>> Detecting linker via: `c++ -Wl,--version` -> 1
>>>>> stderr:
>>>>> ld: unknown options: --version
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> -----------
>>>>> Detecting Apple linker via: `c++ -Wl,-v` -> 1
>>>>> stderr:
>>>>> @(#)PROGRAM:ld PROJECT:dyld-1015.7
>>>>> BUILD 18:48:48 Aug 22 2023
>>>>> configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32
>>>>> i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
>>>>> will use ld-classic for: armv6 armv7 armv7s arm64_32 i386 armv6m
>>>>> armv7k armv7m armv7em
>>>>> LTO support using: LLVM version 15.0.0 (static support for 29, runtime
>>>>> is 29)
>>>>> TAPI support using: Apple TAPI version 15.0.0 (tapi-1500.0.12.3)
>>>>> Library search paths:
>>>>> /opt/homebrew/opt/primesieve/lib
>>>>> /opt/homebrew/opt/bdw-gc/lib
>>>>> /opt/homebrew/opt/libpng/lib
>>>>> /opt/homebrew/opt/ntl/lib
>>>>> /opt/homebrew/opt/bzip2/lib
>>>>> /opt/homebrew/opt/readline/lib
>>>>> /opt/homebrew/lib
>>>>> /usr/local/lib
>>>>> Framework search paths:
>>>>> ld: Undefined symbols:
>>>>> _main, referenced from:
>>>>> <initial-undefines>
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> Sanity testing C++ compiler: c++
>>>>> Is cross compiler: False.
>>>>> Sanity check compiler command line: c++ sanitycheckcpp.cc -o
>>>>> sanitycheckcpp.exe
>>>>> Sanity check compile stdout:
>>>>>
>>>>> -----
>>>>> Sanity check compile stderr:
>>>>>
>>>>> -----
>>>>> Running test binary command:
>>>>>
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/sanitycheckcpp.exe
>>>>> C++ compiler for the host machine: c++ (clang 15.0.0 "Apple clang
>>>>> version 15.0.0 (clang-1500.0.40.1)")
>>>>> C++ linker for the host machine: c++ ld64 1015.7
>>>>> -----------
>>>>> Detecting compiler via: `cython -V` -> 0
>>>>> stdout:
>>>>> Cython version 3.0.2
>>>>> -----------
>>>>> stderr:
>>>>> Cython version 3.0.2
>>>>> -----------
>>>>> Running compile:
>>>>> Working directory:
>>>>> /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx
>>>>> Code:
>>>>> print("hello world")
>>>>> -----------
>>>>> Command line: `cython
>>>>> /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/testfile.pyx
>>>>> -o /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/output.exe
>>>>> --fast-fail` -> 0
>>>>> stderr:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/venv/lib/python3.11/site-packages/Cython/Compiler/Main.py:384:
>>>>> FutureWarning: Cython directive 'language_level' not set, using '3str' for
>>>>> now (Py3). This has changed from earlier releases! File:
>>>>> /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/testfile.pyx
>>>>> tree = Parsing.p_module(s, pxd, full_module_name)
>>>>> -----------
>>>>> Cython compiler for the host machine: cython (cython 3.0.2)
>>>>> -----------
>>>>> Detecting compiler via: `cc --version` -> 0
>>>>> stdout:
>>>>> Apple clang version 15.0.0 (clang-1500.0.40.1)
>>>>> Target: arm64-apple-darwin22.6.0
>>>>> Thread model: posix
>>>>> InstalledDir: /Library/Developer/CommandLineTools/usr/bin
>>>>> -----------
>>>>> Running command: cc -E -dM -
>>>>> -----
>>>>> -----------
>>>>> Detecting linker via: `cc -Wl,--version` -> 1
>>>>> stderr:
>>>>> ld: unknown options: --version
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> -----------
>>>>> Detecting Apple linker via: `cc -Wl,-v` -> 1
>>>>> stderr:
>>>>> @(#)PROGRAM:ld PROJECT:dyld-1015.7
>>>>> BUILD 18:48:48 Aug 22 2023
>>>>> configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32
>>>>> i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
>>>>> will use ld-classic for: armv6 armv7 armv7s arm64_32 i386 armv6m
>>>>> armv7k armv7m armv7em
>>>>> LTO support using: LLVM version 15.0.0 (static support for 29, runtime
>>>>> is 29)
>>>>> TAPI support using: Apple TAPI version 15.0.0 (tapi-1500.0.12.3)
>>>>> Library search paths:
>>>>> /opt/homebrew/opt/primesieve/lib
>>>>> /opt/homebrew/opt/bdw-gc/lib
>>>>> /opt/homebrew/opt/libpng/lib
>>>>> /opt/homebrew/opt/ntl/lib
>>>>> /opt/homebrew/opt/bzip2/lib
>>>>> /opt/homebrew/opt/readline/lib
>>>>> /opt/homebrew/lib
>>>>> /usr/local/lib
>>>>> Framework search paths:
>>>>> ld: Undefined symbols:
>>>>> _main, referenced from:
>>>>> <initial-undefines>
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> Sanity testing C compiler: cc
>>>>> Is cross compiler: False.
>>>>> Sanity check compiler command line: cc sanitycheckc.c -o
>>>>> sanitycheckc.exe
>>>>> Sanity check compile stdout:
>>>>>
>>>>> -----
>>>>> Sanity check compile stderr:
>>>>>
>>>>> -----
>>>>> Running test binary command:
>>>>>
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/sanitycheckc.exe
>>>>> C compiler for the build machine: cc (clang 15.0.0 "Apple clang
>>>>> version 15.0.0 (clang-1500.0.40.1)")
>>>>> C linker for the build machine: cc ld64 1015.7
>>>>> -----------
>>>>> Detecting linker via: `ar --version` -> 1
>>>>> stderr:
>>>>> usage: ar -d [-TLsv] archive file ...
>>>>> ar -m [-TLsv] archive file ...
>>>>> ar -m [-abiTLsv] position archive file ...
>>>>> ar -p [-TLsv] archive [file ...]
>>>>> ar -q [-cTLsv] archive file ...
>>>>> ar -r [-cuTLsv] archive file ...
>>>>> ar -r [-abciuTLsv] position archive file ...
>>>>> ar -t [-TLsv] archive [file ...]
>>>>> ar -x [-ouTLsv] archive [file ...]
>>>>> -----------
>>>>> -----------
>>>>> Detecting compiler via: `c++ --version` -> 0
>>>>> stdout:
>>>>> Apple clang version 15.0.0 (clang-1500.0.40.1)
>>>>> Target: arm64-apple-darwin22.6.0
>>>>> Thread model: posix
>>>>> InstalledDir: /Library/Developer/CommandLineTools/usr/bin
>>>>> -----------
>>>>> Running command: c++ -E -dM -
>>>>> -----
>>>>> -----------
>>>>> Detecting linker via: `c++ -Wl,--version` -> 1
>>>>> stderr:
>>>>> ld: unknown options: --version
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> -----------
>>>>> Detecting Apple linker via: `c++ -Wl,-v` -> 1
>>>>> stderr:
>>>>> @(#)PROGRAM:ld PROJECT:dyld-1015.7
>>>>> BUILD 18:48:48 Aug 22 2023
>>>>> configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32
>>>>> i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
>>>>> will use ld-classic for: armv6 armv7 armv7s arm64_32 i386 armv6m
>>>>> armv7k armv7m armv7em
>>>>> LTO support using: LLVM version 15.0.0 (static support for 29, runtime
>>>>> is 29)
>>>>> TAPI support using: Apple TAPI version 15.0.0 (tapi-1500.0.12.3)
>>>>> Library search paths:
>>>>> /opt/homebrew/opt/primesieve/lib
>>>>> /opt/homebrew/opt/bdw-gc/lib
>>>>> /opt/homebrew/opt/libpng/lib
>>>>> /opt/homebrew/opt/ntl/lib
>>>>> /opt/homebrew/opt/bzip2/lib
>>>>> /opt/homebrew/opt/readline/lib
>>>>> /opt/homebrew/lib
>>>>> /usr/local/lib
>>>>> Framework search paths:
>>>>> ld: Undefined symbols:
>>>>> _main, referenced from:
>>>>> <initial-undefines>
>>>>> clang: error: linker command failed with exit code 1 (use -v to see
>>>>> invocation)
>>>>> -----------
>>>>> Sanity testing C++ compiler: c++
>>>>> Is cross compiler: False.
>>>>> Sanity check compiler command line: c++ sanitycheckcpp.cc -o
>>>>> sanitycheckcpp.exe
>>>>> Sanity check compile stdout:
>>>>>
>>>>> -----
>>>>> Sanity check compile stderr:
>>>>>
>>>>> -----
>>>>> Running test binary command:
>>>>>
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/sanitycheckcpp.exe
>>>>> C++ compiler for the build machine: c++ (clang 15.0.0 "Apple clang
>>>>> version 15.0.0 (clang-1500.0.40.1)")
>>>>> C++ linker for the build machine: c++ ld64 1015.7
>>>>> -----------
>>>>> Detecting compiler via: `cython -V` -> 0
>>>>> stdout:
>>>>> Cython version 3.0.2
>>>>> -----------
>>>>> stderr:
>>>>> Cython version 3.0.2
>>>>> -----------
>>>>> Using cached compile:
>>>>> Cached command line: cython
>>>>> /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/testfile.pyx
>>>>> -o /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/output.exe
>>>>> --fast-fail
>>>>>
>>>>> Code:
>>>>> print("hello world")
>>>>> Cached compiler stdout:
>>>>>
>>>>> Cached compiler stderr:
>>>>>
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/venv/lib/python3.11/site-packages/Cython/Compiler/Main.py:384:
>>>>> FutureWarning: Cython directive 'language_level' not set, using '3str' for
>>>>> now (Py3). This has changed from earlier releases! File:
>>>>> /var/folders/_y/kzsymttn15l00trk8fbjfj880000gn/T/tmp7o4nw2zx/testfile.pyx
>>>>> tree = Parsing.p_module(s, pxd, full_module_name)
>>>>>
>>>>> Cython compiler for the build machine: cython (cython 3.0.2)
>>>>> Build machine cpu family: aarch64
>>>>> Build machine cpu: aarch64
>>>>> Host machine cpu family: aarch64
>>>>> Host machine cpu: aarch64
>>>>> Target machine cpu family: aarch64
>>>>> Target machine cpu: aarch64
>>>>> Program python3 found: YES
>>>>> (/Users/palmieri/Downloads/scipy-1.11.2/venv/bin/python3)
>>>>> Searching for 'python-3.11' via pkgconfig lookup in LIBPC
>>>>> Pkg-config binary for 1 is not cached.
>>>>> Pkg-config binary missing from cross or native file, or env var
>>>>> undefined.
>>>>> Trying a default Pkg-config fallback at pkg-config
>>>>> Found pkg-config: /opt/homebrew/bin/pkg-config (0.29.2)
>>>>> Determining dependency 'python-3.11' with pkg-config executable
>>>>> '/opt/homebrew/bin/pkg-config'
>>>>> env[PKG_CONFIG_LIBDIR]: /opt/homebrew/opt/pyt...@3.11
>>>>> /Frameworks/Python.framework/Versions/3.11/lib/pkgconfig
>>>>> env[PKG_CONFIG_PATH]:
>>>>> /opt/homebrew/opt/sqlite/lib/pkgconfig:/opt/homebrew/opt/readline/lib/pkgconfig:/opt/homebrew/opt/openssl/lib/pkgconfig:/opt/homebrew/opt/openblas/lib/pkgconfig:/opt/homebrew/lib/pkgconfig
>>>>> -----------
>>>>> Called: `/opt/homebrew/bin/pkg-config --modversion python-3.11` -> 0
>>>>> stdout:
>>>>> 3.11
>>>>> -----------
>>>>> env[PKG_CONFIG_LIBDIR]: /opt/homebrew/opt/pyt...@3.11
>>>>> /Frameworks/Python.framework/Versions/3.11/lib/pkgconfig
>>>>> env[PKG_CONFIG_PATH]:
>>>>> /opt/homebrew/opt/sqlite/lib/pkgconfig:/opt/homebrew/opt/readline/lib/pkgconfig:/opt/homebrew/opt/openssl/lib/pkgconfig:/opt/homebrew/opt/openblas/lib/pkgconfig:/opt/homebrew/lib/pkgconfig
>>>>> -----------
>>>>> Called: `/opt/homebrew/bin/pkg-config --cflags python-3.11` -> 0
>>>>> stdout:
>>>>> -I/opt/homebrew/opt/pyt...@3.11
>>>>> /Frameworks/Python.framework/Versions/3.11/include/python3.11
>>>>> -----------
>>>>> env[PKG_CONFIG_LIBDIR]: /opt/homebrew/opt/pyt...@3.11
>>>>> /Frameworks/Python.framework/Versions/3.11/lib/pkgconfig
>>>>> env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1
>>>>> env[PKG_CONFIG_PATH]:
>>>>> /opt/homebrew/opt/sqlite/lib/pkgconfig:/opt/homebrew/opt/readline/lib/pkgconfig:/opt/homebrew/opt/openssl/lib/pkgconfig:/opt/homebrew/opt/openblas/lib/pkgconfig:/opt/homebrew/lib/pkgconfig
>>>>> -----------
>>>>> Called: `/opt/homebrew/bin/pkg-config --libs python-3.11` -> 0
>>>>> env[PKG_CONFIG_LIBDIR]: /opt/homebrew/opt/pyt...@3.11
>>>>> /Frameworks/Python.framework/Versions/3.11/lib/pkgconfig
>>>>> env[PKG_CONFIG_PATH]:
>>>>> /opt/homebrew/opt/sqlite/lib/pkgconfig:/opt/homebrew/opt/readline/lib/pkgconfig:/opt/homebrew/opt/openssl/lib/pkgconfig:/opt/homebrew/opt/openblas/lib/pkgconfig:/opt/homebrew/lib/pkgconfig
>>>>> -----------
>>>>> Called: `/opt/homebrew/bin/pkg-config --libs python-3.11` -> 0
>>>>> Run-time dependency python found: YES 3.11
>>>>> Program cython found: YES
>>>>> (/Users/palmieri/Downloads/scipy-1.11.2/venv/bin/cython)
>>>>> Running compile:
>>>>> Working directory:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp3qmviwgf
>>>>> Code:
>>>>> extern int i;
>>>>> int i;
>>>>>
>>>>> -----------
>>>>> Command line: `cc
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp3qmviwgf/testfile.c
>>>>> -o
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp3qmviwgf/output.obj
>>>>> -c -O0 -Werror=implicit-function-declaration
>>>>> -Werror=unknown-warning-option
>>>>> -Werror=unused-command-line-argument -Werror=ignored-optimization-argument
>>>>> -Wunused-but-set-variable -Wno-unused-but-set-variable` -> 0
>>>>> Compiler for C supports arguments -Wno-unused-but-set-variable: YES
>>>>> Running compile:
>>>>> Working directory:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp9xo39nq0
>>>>> Code:
>>>>> extern int i;
>>>>> int i;
>>>>>
>>>>> -----------
>>>>> Command line: `cc
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp9xo39nq0/testfile.c
>>>>> -o
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp9xo39nq0/output.obj
>>>>> -c -O0 -Werror=implicit-function-declaration
>>>>> -Werror=unknown-warning-option
>>>>> -Werror=unused-command-line-argument -Werror=ignored-optimization-argument
>>>>> -Wunused-function -Wno-unused-function` -> 0
>>>>> Compiler for C supports arguments -Wno-unused-function: YES
>>>>> Running compile:
>>>>> Working directory:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpu7uekb60
>>>>> Code:
>>>>> extern int i;
>>>>> int i;
>>>>>
>>>>> -----------
>>>>> Command line: `cc
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpu7uekb60/testfile.c
>>>>> -o
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpu7uekb60/output.obj
>>>>> -c -O0 -Werror=implicit-function-declaration
>>>>> -Werror=unknown-warning-option
>>>>> -Werror=unused-command-line-argument -Werror=ignored-optimization-argument
>>>>> -Wconversion -Wno-conversion` -> 0
>>>>> Compiler for C supports arguments -Wno-conversion: YES
>>>>> Running compile:
>>>>> Working directory:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpo1xh1ad5
>>>>> Code:
>>>>> extern int i;
>>>>> int i;
>>>>>
>>>>> -----------
>>>>> Command line: `cc
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpo1xh1ad5/testfile.c
>>>>> -o
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmpo1xh1ad5/output.obj
>>>>> -c -O0 -Werror=implicit-function-declaration
>>>>> -Werror=unknown-warning-option
>>>>> -Werror=unused-command-line-argument -Werror=ignored-optimization-argument
>>>>> -Wmisleading-indentation -Wno-misleading-indentation` -> 0
>>>>> Compiler for C supports arguments -Wno-misleading-indentation: YES
>>>>> Running compile:
>>>>> Working directory:
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp__jom5wq
>>>>> Code:
>>>>> int main(void) { return 0; }
>>>>>
>>>>> -----------
>>>>> Command line: `cc
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp__jom5wq/testfile.c
>>>>> -o
>>>>> /Users/palmieri/Downloads/scipy-1.11.2/build/meson-private/tmp__jom5wq/output.exe
>>>>> -O0 -Werror=implicit-function-declaration -lm
>>>>> -Wl,-undefined,dynamic_lookup` -> 0
>>>>> Library m found: YES
>>>>> -----------
>>>>> Detecting compiler via: `gfortran --version` -> 0
>>>>> stdout:
>>>>> GNU Fortran (Homebrew GCC 13.2.0) 13.2.0
>>>>> Copyright (C) 2023 Free Software Foundation, Inc.
>>>>> This is free software; see the source for copying conditions. There
>>>>> is NO
>>>>> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
>>>>> PURPOSE.
>>>>> -----------
>>>>> Running command: gfortran -E -dM -
>>>>> -----
>>>>> -----------
>>>>> Detecting linker via: `gfortran -Wl,--version` -> 1
>>>>> stderr:
>>>>> collect2 version 13.2.0
>>>>> /usr/bin/ld -syslibroot
>>>>> /Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk/ -dynamic -arch
>>>>> arm64
>>>>> -platform_version macos 13.0.0 0.0 -o a.out
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc
>>>>> -L/opt/homebrew/opt/primesieve/lib -L/opt/homebrew/opt/bdw-gc/lib
>>>>> -L/opt/homebrew/opt/libpng/lib -L/opt/homebrew/opt/ntl/lib
>>>>> -L/opt/homebrew/opt/bzip2/lib -L/opt/homebrew/opt/readline/lib
>>>>> -L/opt/homebrew/lib
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13/../../..
>>>>> --version -lemutls_w -lgcc -lSystem -lgcc -no_compact_unwind -rpath
>>>>> @loader_path -rpath
>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>> -rpath /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc -rpath
>>>>> /opt/homebrew/Cellar/primesieve/11.1/lib -rpath
>>>>> /opt/homebrew/Cellar/bdw-gc/8.2.4/lib -rpath
>>>>> /opt/homebrew/Cellar/libpng/1.6.40/lib -rpath
>>>>> /opt/homebrew/Cellar/ntl/11.5.1/lib -rpath
>>>>> /opt/homebrew/Cellar/bzip2/1.0.8/lib -rpath
>>>>> /opt/homebrew/Cellar/readline/8.2.1/lib -rpath /opt/homebrew/lib -rpath
>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current
>>>>>
>>>>> ld: unknown options: --version
>>>>> collect2: error: ld returned 1 exit status
>>>>> -----------
>>>>>
>>>>> meson.build:82:0: ERROR: Unable to detect linker for compiler
>>>>> `gfortran -Wl,--version`
>>>>>
>>>>> stdout:
>>>>> stderr: collect2 version 13.2.0
>>>>> /usr/bin/ld -syslibroot
>>>>> /Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk/ -dynamic -arch
>>>>> arm64
>>>>> -platform_version macos 13.0.0 0.0 -o a.out
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc
>>>>> -L/opt/homebrew/opt/primesieve/lib -L/opt/homebrew/opt/bdw-gc/lib
>>>>> -L/opt/homebrew/opt/libpng/lib -L/opt/homebrew/opt/ntl/lib
>>>>> -L/opt/homebrew/opt/bzip2/lib -L/opt/homebrew/opt/readline/lib
>>>>> -L/opt/homebrew/lib
>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13/../../..
>>>>> --version -lemutls_w -lgcc -lSystem -lgcc -no_compact_unwind -rpath
>>>>> @loader_path -rpath
>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>> -rpath /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc -rpath
>>>>> /opt/homebrew/Cellar/primesieve/11.1/lib -rpath
>>>>> /opt/homebrew/Cellar/bdw-gc/8.2.4/lib -rpath
>>>>> /opt/homebrew/Cellar/libpng/1.6.40/lib -rpath
>>>>> /opt/homebrew/Cellar/ntl/11.5.1/lib -rpath
>>>>> /opt/homebrew/Cellar/bzip2/1.0.8/lib -rpath
>>>>> /opt/homebrew/Cellar/readline/8.2.1/lib -rpath /opt/homebrew/lib -rpath
>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current
>>>>>
>>>>> ld: unknown options: --version
>>>>> collect2: error: ld returned 1 exit status
>>>>>
>>>>>
>>>>>
>>>>> On Saturday, September 23, 2023 at 11:06:06 AM UTC-7 Dima Pasechnik
>>>>> wrote:
>>>>>
>>>>>> As far as I can gather from scipy bug tracker,
>>>>>> they can build on M2 just fine
>>>>>> https://github.com/scipy/scipy/issues/18308
>>>>>>
>>>>>>
>>>>>> On Sat, 23 Sept 2023, 18:07 John H Palmieri, <jhpalm...@gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>>> This is with an Apple Silicon laptop, M2 chip, in case that matters.
>>>>>>>
>>>>>>> On Saturday, September 23, 2023 at 10:06:36 AM UTC-7 John H Palmieri
>>>>>>> wrote:
>>>>>>>
>>>>>>>> I tried the venv approach in the scipy docs, and I ran into the
>>>>>>>> same error.
>>>>>>>>
>>>>>>>> On Saturday, September 23, 2023 at 1:31:34 AM UTC-7 Dima Pasechnik
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Can you build scipy from source using their instructions?
>>>>>>>>>
>>>>>>>>> On Sat, 23 Sept 2023, 06:25 John H Palmieri, <jhpalm...@gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> It's from homebrew's gcc. I did `brew reinstall gcc` followed by
>>>>>>>>>> `make distclean && ./configure && make meson_python && make` and it
>>>>>>>>>> still
>>>>>>>>>> fails at scipy, same error. I removed the cached download file for
>>>>>>>>>> homebrew's gcc and tried again, same result. I have not yet tried
>>>>>>>>>> Sage's
>>>>>>>>>> gcc.
>>>>>>>>>>
>>>>>>>>>> On Thursday, September 21, 2023 at 11:18:15 PM UTC-7 Dima
>>>>>>>>>> Pasechnik wrote:
>>>>>>>>>>
>>>>>>>>>>> Where is gfortran coming from here?
>>>>>>>>>>> Do you build it with Sage, or use an external one?
>>>>>>>>>>>
>>>>>>>>>>> If the external one, e.g. from Homebrew, you most probably need
>>>>>>>>>>> to update/reinstall.
>>>>>>>>>>> Ditto in Sage
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> On Fri, 22 Sept 2023, 00:52 John H Palmieri, <
>>>>>>>>>>> jhpalm...@gmail.com> wrote:
>>>>>>>>>>>
>>>>>>>>>>>> A new problem, after upgrading to OS X 13.6 and the newest
>>>>>>>>>>>> version of the command-line tools: scipy fails to build again,
>>>>>>>>>>>> this time
>>>>>>>>>>>> with the error:
>>>>>>>>>>>>
>>>>>>>>>>>> ../../meson.build:82:0: ERROR: Unable to detect linker for
>>>>>>>>>>>> compiler `gfortran -Wl,--version
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -Wl,-rpath,/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -Wl,-rpath,/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib`
>>>>>>>>>>>> stdout:
>>>>>>>>>>>> stderr: collect2 version 13.2.0
>>>>>>>>>>>> /usr/bin/ld -syslibroot
>>>>>>>>>>>> /Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk/ -dynamic
>>>>>>>>>>>> -arch arm64
>>>>>>>>>>>> -platform_version macos 13.0.0 0.0 -o a.out
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>>>>>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -L/Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -L/opt/homebrew/opt/primesieve/lib -L/opt/homebrew/opt/bdw-gc/lib
>>>>>>>>>>>> -L/opt/homebrew/opt/libpng/lib -L/opt/homebrew/opt/ntl/lib
>>>>>>>>>>>> -L/opt/homebrew/opt/bzip2/lib -L/opt/homebrew/opt/readline/lib
>>>>>>>>>>>> -L/opt/homebrew/lib
>>>>>>>>>>>> -L/opt/homebrew/Cellar/gcc/13.2.0/bin/../lib/gcc/current/gcc/aarch64-apple-darwin22/13/../../..
>>>>>>>>>>>> --version -rpath
>>>>>>>>>>>> /Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -rpath
>>>>>>>>>>>> /Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -lemutls_w
>>>>>>>>>>>> -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc/aarch64-apple-darwin22/13
>>>>>>>>>>>> -rpath /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current/gcc -rpath
>>>>>>>>>>>> /Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -rpath
>>>>>>>>>>>> /Users/palmieri/Desktop/Sage/TESTING/sage-10.2.beta3/local/lib
>>>>>>>>>>>> -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/primesieve/11.1/lib -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/bdw-gc/8.2.4/lib -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/libpng/1.6.40/lib -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/ntl/11.5.1/lib -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/bzip2/1.0.8/lib -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/readline/8.2.1/lib -rpath /opt/homebrew/lib
>>>>>>>>>>>> -rpath
>>>>>>>>>>>> /opt/homebrew/Cellar/gcc/13.2.0/lib/gcc/current
>>>>>>>>>>>> ld: unknown options: --version
>>>>>>>>>>>> collect2: error: ld returned 1 exit status
>>>>>>>>>>>>
>>>>>>>>>>>> Suggestions?
>>>>>>>>>>>>
>>>>>>>>>>>> On Sunday, September 17, 2023 at 11:25:02 AM UTC-7 John H
>>>>>>>>>>>> Palmieri wrote:
>>>>>>>>>>>>
>>>>>>>>>>>>> Similar problem for me on OS X. I don't understand something:
>>>>>>>>>>>>> the dependencies for scipy include meson_python, but that package
>>>>>>>>>>>>> is not
>>>>>>>>>>>>> installed before scipy attempts to build, and fails. Running "make
>>>>>>>>>>>>> meson_python" and then "make scipy" succeeds, as does "make".
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>> On Saturday, September 16, 2023 at 2:59:58 PM UTC-7 Kwankyu
>>>>>>>>>>>>> Lee wrote:
>>>>>>>>>>>>>
>>>>>>>>>>>>>> Succeeded after sage -pip install meson-python.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> On Sunday, September 17, 2023 at 6:52:59 AM UTC+9 Kwankyu Lee
>>>>>>>>>>>>>> wrote:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> Incremental build failed
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> [......................................................................]
>>>>>>>>>>>>>>> [scipy-1.11.2] scipy-1.11.2
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ====================================================
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Removing file or directory
>>>>>>>>>>>>>>> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/sagemath-standard.egg-link
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Removing pth entries from
>>>>>>>>>>>>>>> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/easy-install.pth:
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Removing entry:
>>>>>>>>>>>>>>> /Users/kwankyu/GitHub/sage-dev/src
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Successfully uninstalled
>>>>>>>>>>>>>>> sagemath-standard-10.2b3
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Running setup.py develop for
>>>>>>>>>>>>>>> sagemath-standard
>>>>>>>>>>>>>>> [sagelib-10.2.beta3] Running command python setup.py
>>>>>>>>>>>>>>> develop
>>>>>>>>>>>>>>> [scipy-1.11.2] Setting up build directory for scipy-1.11.2
>>>>>>>>>>>>>>> [scipy-1.11.2] Finished extraction
>>>>>>>>>>>>>>> [scipy-1.11.2] Applying patches from ../patches...
>>>>>>>>>>>>>>> [scipy-1.11.2] Applying ../patches/numpy-include.patch
>>>>>>>>>>>>>>> [scipy-1.11.2] patching file scipy/spatial/setup.py
>>>>>>>>>>>>>>> [scipy-1.11.2] Hunk #1 succeeded at 39 (offset -1 lines).
>>>>>>>>>>>>>>> [scipy-1.11.2] Applying
>>>>>>>>>>>>>>> ../patches/tests_no_internet_dependency.patch
>>>>>>>>>>>>>>> [scipy-1.11.2] patching file scipy/datasets/meson.build
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ****************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2] Host system:
>>>>>>>>>>>>>>> [scipy-1.11.2] Darwin Helios.local 22.6.0 Darwin Kernel
>>>>>>>>>>>>>>> Version 22.6.0: Wed Jul 5 22:21:56 PDT 2023;
>>>>>>>>>>>>>>> root:xnu-8796.141.3~6/RELEASE_X86_64 x86_64
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ****************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2] C compiler: gcc
>>>>>>>>>>>>>>> [scipy-1.11.2] C compiler version:
>>>>>>>>>>>>>>> [scipy-1.11.2] Apple clang version 14.0.3
>>>>>>>>>>>>>>> (clang-1403.0.22.14.1)
>>>>>>>>>>>>>>> [scipy-1.11.2] Target: x86_64-apple-darwin22.6.0
>>>>>>>>>>>>>>> [scipy-1.11.2] Thread model: posix
>>>>>>>>>>>>>>> [scipy-1.11.2] InstalledDir:
>>>>>>>>>>>>>>> /Library/Developer/CommandLineTools/usr/bin
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ****************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2] Package 'scipy' is currently not installed
>>>>>>>>>>>>>>> [scipy-1.11.2] No legacy uninstaller found for 'scipy';
>>>>>>>>>>>>>>> nothing to do
>>>>>>>>>>>>>>> [scipy-1.11.2] Installing scipy-1.11.2
>>>>>>>>>>>>>>> [scipy-1.11.2] DEPRECATION: --no-binary currently disables
>>>>>>>>>>>>>>> reading from the cache of locally built wheels. In the future
>>>>>>>>>>>>>>> --no-binary
>>>>>>>>>>>>>>> will not influence the wheel cache. pip 23.1 will enforce this
>>>>>>>>>>>>>>> behaviour
>>>>>>>>>>>>>>> change. A possible replacement is to use the --no-cache-dir
>>>>>>>>>>>>>>> option. You can
>>>>>>>>>>>>>>> use the flag --use-feature=no-binary-enable-wheel-cache to test
>>>>>>>>>>>>>>> the
>>>>>>>>>>>>>>> upcoming behaviour. Discussion can be found at
>>>>>>>>>>>>>>> https://github.com/pypa/pip/issues/11453
>>>>>>>>>>>>>>> [scipy-1.11.2] Processing
>>>>>>>>>>>>>>> /Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/var/tmp/sage/build/scipy-1.11.2/src
>>>>>>>>>>>>>>> [scipy-1.11.2] Preparing metadata (pyproject.toml): started
>>>>>>>>>>>>>>> [scipy-1.11.2] Running command Preparing metadata
>>>>>>>>>>>>>>> (pyproject.toml)
>>>>>>>>>>>>>>> [scipy-1.11.2] Preparing metadata (pyproject.toml):
>>>>>>>>>>>>>>> finished with status 'done'
>>>>>>>>>>>>>>> [scipy-1.11.2] ERROR: Exception:
>>>>>>>>>>>>>>> [scipy-1.11.2] Traceback (most recent call last):
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/cli/base_command.py",
>>>>>>>>>>>>>>> line 160, in exc_logging_wrapper
>>>>>>>>>>>>>>> [scipy-1.11.2] status = run_func(*args)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/cli/req_command.py",
>>>>>>>>>>>>>>> line 247, in wrapper
>>>>>>>>>>>>>>> [scipy-1.11.2] return func(self, options, args)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/commands/wheel.py",
>>>>>>>>>>>>>>> line 170, in run
>>>>>>>>>>>>>>> [scipy-1.11.2] requirement_set = resolver.resolve(reqs,
>>>>>>>>>>>>>>> check_supported_wheels=True)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/resolver.py",
>>>>>>>>>>>>>>> line 73, in resolve
>>>>>>>>>>>>>>> [scipy-1.11.2] collected =
>>>>>>>>>>>>>>> self.factory.collect_root_requirements(root_reqs)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py",
>>>>>>>>>>>>>>> line 491, in collect_root_requirements
>>>>>>>>>>>>>>> [scipy-1.11.2] req =
>>>>>>>>>>>>>>> self._make_requirement_from_install_req(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py",
>>>>>>>>>>>>>>> line 453, in _make_requirement_from_install_req
>>>>>>>>>>>>>>> [scipy-1.11.2] cand = self._make_candidate_from_link(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/factory.py",
>>>>>>>>>>>>>>> line 206, in _make_candidate_from_link
>>>>>>>>>>>>>>> [scipy-1.11.2] self._link_candidate_cache[link] =
>>>>>>>>>>>>>>> LinkCandidate(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py",
>>>>>>>>>>>>>>> line 297, in __init__
>>>>>>>>>>>>>>> [scipy-1.11.2] super().__init__(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py",
>>>>>>>>>>>>>>> line 162, in __init__
>>>>>>>>>>>>>>> [scipy-1.11.2] self.dist = self._prepare()
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py",
>>>>>>>>>>>>>>> line 231, in _prepare
>>>>>>>>>>>>>>> [scipy-1.11.2] dist = self._prepare_distribution()
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/candidates.py",
>>>>>>>>>>>>>>> line 308, in _prepare_distribution
>>>>>>>>>>>>>>> [scipy-1.11.2] return
>>>>>>>>>>>>>>> preparer.prepare_linked_requirement(self._ireq,
>>>>>>>>>>>>>>> parallel_builds=True)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py",
>>>>>>>>>>>>>>> line 491, in prepare_linked_requirement
>>>>>>>>>>>>>>> [scipy-1.11.2] return
>>>>>>>>>>>>>>> self._prepare_linked_requirement(req, parallel_builds)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py",
>>>>>>>>>>>>>>> line 577, in _prepare_linked_requirement
>>>>>>>>>>>>>>> [scipy-1.11.2] dist = _get_prepared_distribution(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/prepare.py",
>>>>>>>>>>>>>>> line 69, in _get_prepared_distribution
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> abstract_dist.prepare_distribution_metadata(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/distributions/sdist.py",
>>>>>>>>>>>>>>> line 61, in prepare_distribution_metadata
>>>>>>>>>>>>>>> [scipy-1.11.2] self.req.prepare_metadata()
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/req/req_install.py",
>>>>>>>>>>>>>>> line 535, in prepare_metadata
>>>>>>>>>>>>>>> [scipy-1.11.2] self.metadata_directory =
>>>>>>>>>>>>>>> generate_metadata(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/operations/build/metadata.py",
>>>>>>>>>>>>>>> line 35, in generate_metadata
>>>>>>>>>>>>>>> [scipy-1.11.2] distinfo_dir =
>>>>>>>>>>>>>>> backend.prepare_metadata_for_build_wheel(metadata_dir)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_internal/utils/misc.py",
>>>>>>>>>>>>>>> line 706, in prepare_metadata_for_build_wheel
>>>>>>>>>>>>>>> [scipy-1.11.2] return
>>>>>>>>>>>>>>> super().prepare_metadata_for_build_wheel(
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/wrappers.py",
>>>>>>>>>>>>>>> line 189, in prepare_metadata_for_build_wheel
>>>>>>>>>>>>>>> [scipy-1.11.2] return
>>>>>>>>>>>>>>> self._call_hook('prepare_metadata_for_build_wheel', {
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/wrappers.py",
>>>>>>>>>>>>>>> line 319, in _call_hook
>>>>>>>>>>>>>>> [scipy-1.11.2] raise
>>>>>>>>>>>>>>> BackendUnavailable(data.get('traceback', ''))
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> pip._vendor.pep517.wrappers.BackendUnavailable: Traceback (most
>>>>>>>>>>>>>>> recent call
>>>>>>>>>>>>>>> last):
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/Users/kwankyu/GitHub/sage-dev/local/var/lib/sage/venv-python3.10/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py",
>>>>>>>>>>>>>>> line 77, in _build_backend
>>>>>>>>>>>>>>> [scipy-1.11.2] obj = import_module(mod_path)
>>>>>>>>>>>>>>> [scipy-1.11.2] File
>>>>>>>>>>>>>>> "/usr/local/Cellar/pyt...@3.10/3.10.9/Frameworks/Python.framework/Versions/3.10/lib/python3.10/importlib/__init__.py",
>>>>>>>>>>>>>>> line 126, in import_module
>>>>>>>>>>>>>>> [scipy-1.11.2] return
>>>>>>>>>>>>>>> _bootstrap._gcd_import(name[level:], package, level)
>>>>>>>>>>>>>>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line
>>>>>>>>>>>>>>> 1050, in _gcd_import
>>>>>>>>>>>>>>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line
>>>>>>>>>>>>>>> 1027, in _find_and_load
>>>>>>>>>>>>>>> [scipy-1.11.2] File "<frozen importlib._bootstrap>", line
>>>>>>>>>>>>>>> 1004, in _find_and_load_unlocked
>>>>>>>>>>>>>>> [scipy-1.11.2] ModuleNotFoundError: No module named 'mesonpy'
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ********************************************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2] Error building a wheel for scipy-1.11.2
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ********************************************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> [scipy-1.11.2] real 0m0.924s
>>>>>>>>>>>>>>> [scipy-1.11.2] user 0m0.663s
>>>>>>>>>>>>>>> [scipy-1.11.2] sys 0m0.184s
>>>>>>>>>>>>>>> [scipy-1.11.2]
>>>>>>>>>>>>>>> ************************************************************************
>>>>>>>>>>>>>>> [scipy-1.11.2] Error installing package scipy-1.11.2
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> On Sunday, September 17, 2023 at 12:31:53 AM UTC+9 Volker
>>>>>>>>>>>>>>> Braun wrote:
>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>>> As always, you can get the latest beta version from the
>>>>>>>>>>>>>>>> "develop" git branch. Alternatively, the self-contained source
>>>>>>>>>>>>>>>> tarball is
>>>>>>>>>>>>>>>> at http://www.sagemath.org/download-latest.html
>>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>>> 80f6d772a15 (tag: 10.2.beta3, github/develop) Updated
>>>>>>>>>>>>>>>> SageMath version to 10.2.beta3
>>>>>>>>>>>>>>>> f32860b2015 gh-36263: Fix setuptools version bounds in
>>>>>>>>>>>>>>>> generated `pyproject.toml` files
>>>>>>>>>>>>>>>> c95bd1440b4 gh-36260: `MPowerSeries`: Don't go through
>>>>>>>>>>>>>>>> symbolics to compute exp(0), log(1)
>>>>>>>>>>>>>>>> cac16e2fa5d gh-36256: Support more system-site packages
>>>>>>>>>>>>>>>> 238b1dc6eef gh-36255: numpy-1.25 compatibility
>>>>>>>>>>>>>>>> 486d3b99e87 gh-36250: various details in sets/disjoint_set
>>>>>>>>>>>>>>>> 357b34b55f7 gh-36249: E228 and E225 in
>>>>>>>>>>>>>>>> groups,interfaces,modules,plot
>>>>>>>>>>>>>>>> adc3df9e5c0 gh-36248: some care for unused variables in
>>>>>>>>>>>>>>>> matrix/
>>>>>>>>>>>>>>>> 413b5d679c5 gh-36247: fix E228 and E225 in categories/
>>>>>>>>>>>>>>>> 96d249a37d9 gh-36243: ⬆️ Bump actions/checkout from 3 to 4
>>>>>>>>>>>>>>>> 4bb48bddfa4 gh-36241: ⬆️ Bump
>>>>>>>>>>>>>>>> myrotvorets/set-commit-status-action from 1.1.7 to 2.0.0
>>>>>>>>>>>>>>>> 191d1f97ba6 gh-36240: Fix Python package metadata generated
>>>>>>>>>>>>>>>> by `bootstrap`
>>>>>>>>>>>>>>>> 905d3c2d486 gh-36238: `sage -t`: Distinguish .pxd from .pyx
>>>>>>>>>>>>>>>> in doctest basenames
>>>>>>>>>>>>>>>> b6b50a80e96 gh-36235: support for ecl 23.9.9
>>>>>>>>>>>>>>>> 683b05bb5a2 gh-36232: Make `min_spanning_tree` robust to
>>>>>>>>>>>>>>>> incomparable vertex labels
>>>>>>>>>>>>>>>> 8d09d156fcf gh-36231: fix typo in documentation
>>>>>>>>>>>>>>>> 33182d9feaa gh-36225: improve the use of graphs in
>>>>>>>>>>>>>>>> `sage/combinat/posets/*`
>>>>>>>>>>>>>>>> 33d6cc5a001 gh-36224: Add cycle_type() and fix to_cycle()
>>>>>>>>>>>>>>>> to SignedPermutation.
>>>>>>>>>>>>>>>> 3e6db2405df gh-36221: get rid of xrange again
>>>>>>>>>>>>>>>> 029450c8712 gh-36219: configure.ac: disable
>>>>>>>>>>>>>>>> webencodings,tinycss2 with --disable-notebook
>>>>>>>>>>>>>>>> 3ea961767e8 gh-36218: src/bin/sage-env: set
>>>>>>>>>>>>>>>> PYDEVD_DISABLE_FILE_VALIDATION=1
>>>>>>>>>>>>>>>> f95e442cb4b gh-36213: Fix sync labels issues for step 2
>>>>>>>>>>>>>>>> going live
>>>>>>>>>>>>>>>> e74579d32b9 gh-36212: singular: added missing #endif
>>>>>>>>>>>>>>>> 322ad22e8c8 gh-36210: configure.ac: disable mathjax with
>>>>>>>>>>>>>>>> --disable-doc
>>>>>>>>>>>>>>>> 6fe3561bbbb gh-36209: build/pkgs/ipython/dependencies: drop
>>>>>>>>>>>>>>>> jinja2
>>>>>>>>>>>>>>>> 78efe5546db gh-36206: Remove some obsolete "six"
>>>>>>>>>>>>>>>> dependencies
>>>>>>>>>>>>>>>> 1a1df6f6fbe gh-36186: Drop obsolete html5lib package
>>>>>>>>>>>>>>>> 5b2f125a842 gh-36176: build/pkgs/tox: Update, require tox
>>>>>>>>>>>>>>>> >= 4.2.7, update dependencies
>>>>>>>>>>>>>>>> 9dd8a772e53 gh-36168: `sage.groups`: Modularization fixes,
>>>>>>>>>>>>>>>> `# needs`, doctest cosmetics
>>>>>>>>>>>>>>>> 4f4fbc29184 gh-36165: Fix reduction of cusps for Gamma(N)
>>>>>>>>>>>>>>>> 45537351d7e gh-36122: Added hash function to elements of
>>>>>>>>>>>>>>>> the fundamental group of an extended affine Weyl group
>>>>>>>>>>>>>>>> 5b9137c7204 gh-35970:
>>>>>>>>>>>>>>>> src/sage/combinat/affine_permutation.py: Fix docstring markup
>>>>>>>>>>>>>>>> bbe57a4d34d gh-35964: Matroids: Don't forget to check rank
>>>>>>>>>>>>>>>> in `equals`, `is_isomorphism`
>>>>>>>>>>>>>>>> 23b1a0af6f0 gh-35875: Implementing moment angle complexes
>>>>>>>>>>>>>>>> 3a3126ffc0e gh-35767: add .basis_matrix() wrapper to
>>>>>>>>>>>>>>>> quaternion orders
>>>>>>>>>>>>>>>> d412568dff7 gh-35485: New comparison mode to lazy series
>>>>>>>>>>>>>>>> and better undefined check
>>>>>>>>>>>>>>>> 21a624a7b45 gh-35362: Implement infinite sums and products
>>>>>>>>>>>>>>>> for lazy series
>>>>>>>>>>>>>>>> 8c040276465 gh-35038: Implement Milnor fiber and Coxeter
>>>>>>>>>>>>>>>> complexes
>>>>>>>>>>>>>>>> 41031292ff1 (tag: 10.2.beta2) Updated SageMath version to
>>>>>>>>>>>>>>>> 10.2.beta2
>>>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> --
>>>>>>>>>>>>
>>>>>>>>>>> You received this message because you are subscribed to the
>>>>>>>>>>>> Google Groups "sage-release" group.
>>>>>>>>>>>> To unsubscribe from this group and stop receiving emails from
>>>>>>>>>>>> it, send an email to sage-release...@googlegroups.com.
>>>>>>>>>>>>
>>>>>>>>>>> To view this discussion on the web visit
>>>>>>>>>>>> https://groups.google.com/d/msgid/sage-release/8ea52d9b-96c1-4792-af11-6589218cf564n%40googlegroups.com
>>>>>>>>>>>> <https://groups.google.com/d/msgid/sage-release/8ea52d9b-96c1-4792-af11-6589218cf564n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>>>>>>>> .
>>>>>>>>>>>>
>>>>>>>>>>> --
>>>>>>>>>> You received this message because you are subscribed to the
>>>>>>>>>> Google Groups "sage-release" group.
>>>>>>>>>> To unsubscribe from this group and stop receiving emails from it,
>>>>>>>>>> send an email to sage-release...@googlegroups.com.
>>>>>>>>>>
>>>>>>>>> To view this discussion on the web visit
>>>>>>>>>> https://groups.google.com/d/msgid/sage-release/7a1bce7c-8f7f-480f-a8c0-45600328398en%40googlegroups.com
>>>>>>>>>> <https://groups.google.com/d/msgid/sage-release/7a1bce7c-8f7f-480f-a8c0-45600328398en%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>>>>>> .
>>>>>>>>>>
>>>>>>>>> --
>>>>>>> You received this message because you are subscribed to the Google
>>>>>>> Groups "sage-release" group.
>>>>>>> To unsubscribe from this group and stop receiving emails from it,
>>>>>>> send an email to sage-release...@googlegroups.com.
>>>>>>>
>>>>>> To view this discussion on the web visit
>>>>>>> https://groups.google.com/d/msgid/sage-release/c6071de3-e4aa-4a5f-98ed-6e221ceb10den%40googlegroups.com
>>>>>>> <https://groups.google.com/d/msgid/sage-release/c6071de3-e4aa-4a5f-98ed-6e221ceb10den%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>>> .
>>>>>>>
>>>>>> --
>>>> You received this message because you are subscribed to the Google
>>>> Groups "sage-release" group.
>>>> To unsubscribe from this group and stop receiving emails from it, send
>>>> an email to sage-release...@googlegroups.com.
>>>>
>>> To view this discussion on the web visit
>>>> https://groups.google.com/d/msgid/sage-release/6087a322-39a5-45b8-9cb1-f3a7dfc93435n%40googlegroups.com
>>>> <https://groups.google.com/d/msgid/sage-release/6087a322-39a5-45b8-9cb1-f3a7dfc93435n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>> .
>>>>
>>> --
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