On Dec 16, 2007 11:04 AM, William Stein <[EMAIL PROTECTED]> wrote:
>
> Hello,
>
> Sage 2.9 has been released. It is available at
>
>            http://sagemath.org/download.html
>
> This is a *major* new release, with a huge number of tickets
> closed, and the additional of both R and the ATLAS BLAS
> as standard packages.
>
> If you're an *expert* user or just brave, do
>
>        sage -upgrade


I had no serious problem with this on a 64 bit ubuntu machine.
However, it did open up a file emacs (yeah:-), as though it was doing a
hg_sage.commit(). I just got out of emacs without saving, aborting
something I guess, and it continued with the upgrade.


>
> but this may yield your sage temporarily unusable -- if that does happen,
> do email sage-support.
>
> If you're a beginner install from source or wait for new
> binaries to be posted in a few days (or less).
>
> ---------------
>
> The following people contributed this release:
>
>  * Michael Abshoff
>  * Martin Albrecht
>  * Robert Bradshaw
>  * Tom Boothby
>  * Ondrej Certik
>  * Craig Citro
>  * F. Clark
>  * John Cremona
>  * Alyson Deines
>  * Burcin Erocal
>  * Jan Groenewald
>  * David Harvey
>  * Mike Hansen
>  * Josh Kantor
>  * Robert Miller
>  * Bobby Moretti
>  * Rich Morin
>  * Bill Page
>  * Willem Jan Palenstijn
>  * Yi Qiang
>  * David Roe
>  * William Stein
>  * Carl Witty
>  * Paul Zimmermann
>
> Cheers,
>
> Michael Abshoff (release chair), William Stein
>
> * Major Features, New Spkgs and Bugfixes
>
> We achieved most of the goals we set ourselves for 2.9. The major
> changes compared to 2.8.15 are:
>
>  * Integration of PolyBoRi
>  * Integration of ATLAS BLAS/Lapack on non-OSX
>  * Integration of R 2.6.1 and rpy
>  * Update to FLINT 1.02
>  * Update to Symmetrica 2.0
>  * Much faster permutation arithmatic
>  * Very fast rubik's cube solvers
>  * Many build fixes applied and many bugs squashed
>
> We closed a total of 110 tickets, for details see below or our
> tracker at
>
> http://www.sagetrac.org/sage_trac/query?status=closed&milestone=sage-2.9
>
> * Known Issues with 2.9
>
> #1137: Import gd fails to import on OSX 10.4 ppc. Any attempt
>        to fix this breaks other applications on different OSX
>        flavors. We hope to fix this in 2.9.1.
> #1497: ATLAS fails to build on FC7, Dual core [known ATLAS
>        issue with workaround: disable power management]
>
> * Upcoming Releases
>
> The following releases are planned for the rest of the year:
>
>  * 2.9.1: chaired by Robert Miller, bug fixes, release
>           planned about a week from now
>  * 2.9.2: chaired by Michael Abshoff, bug fixes, release
>           planned about two weeks from now
>
> 2.9.2 will be the release we plan to distribute on DVD at the AMS
> meeting, so we are shooting hard for an excellent release.
>
> * Doctesting Coverage
>
> For 2.9:
>
> Overall weighted coverage score:  35.3%
> Total number of functions:  17947
>
> Compared to 2.8.15 this is an increase by 0.5%.
>
> * About Sage (http://www.sagemath.org)
>
> Sage is developed by volunteers and combines 71 open source packages.
> It is available for download from sagemath.org and its mirrors in
> source or binary form. If you have any questions and/or problems
> please report them to the google groups sage-devel, sage-support,
> sage-forum or sage-newbie. You can also drop by in #sage-devel in
> freenode.
>
> * Closed Tickets:
>
> Merged in rc3:
>
> #1529: William Stein: update install_scripts to also install R script.
> #1530: William Stein: building tut.tex is currently broken
> #1531: Michael Abshoff: fix doctest failure sage/calculus/calculus.py
> #1532: Josh Kantor; Michael Abshoff: Error out with intelligent
>        message if ATLAS tune failed
>
> Without tickets:
>
> William Stein: update libpng.spkg
> William Stein: don't let "sage -ba" start sage
> William Stein: link libcsage.so against atlas on non-OSX
> William Stein: link IML against atlas on non-OSX
> Willaim Stein, Michael Abshoff: Various doctest fixes
> Michael Abshoff: link LinBox against atlas on non-OSX
> Michael Abshoff: remove forced check from FLINT.spkg
>
> Merged in rc1/2:
>
> #1258: Willem Jan Palenstijn, Robert Miller: additions and changes
>        to linear_codes
> #1457: William Stein: "BUG: Rational.__pow__ called on a non-Rational"
> #1464: Robert Miller: binary code canonical labels & automorphism
>        group generators
> #1503: William Stein: formal function calls don't coerce correctly to
>        Mathematica
> #1511: Robert Bradshaw: Export 3d objects in jmol format
> #1527: William Stein: doctest R with "import rpy"
> #1528: William Stein: make "sage -R" run R.
>
> Merged in rc0:
>
> #444: Robert Bradshaw: solve the rubik's cube fast!
> #553: Mike Hansen, William Stein: calling of symbolic expressions is
>       sometimes ridiculous
> #1077: Yi Qiang: DSage restarts two workers after timeout, various
>        other fixes and improvements
> #1119: Martin Albrecht, Robert Bradshaw: EllipticCurve.random_element
>        for char=2
> #1137: Robert Miller: matrix visualize_structure is completely broken
>        on OSX [later reverted]
> #1162: Paul Zimmermann, Carl Witty: fix issues in RealField <-> RQDF
>        conversions
> #1183: David Roe, William Stein, Alyson Deines: Residue fields are
>        broken. This patch set also fixes #1242 and #1185
> #1232: Craig Citro: bug in modular symbols over GF(2)
> #1237: David Roe: E.torsion_order() fails on curves with big
>        coefficients!
> #1239: Robert Bradshaw, John Cremona: Wrap Simon's new gp two
>        descent code
> #1393: Robert Miller: is_integral_domain may return incorrect answer
> #1395: Mike Hansen: notebook(directory="foo/") misbehaves
> #1401: Mike Hansen, William Stein: deprecate A[n] for n a matrix
> #1404: F. Clark, William Stein: bug in %latex feature in the notebook)
> #1407: William Stein: deciding that generators don't generate an order
>        in some extensions can be way way too slow.
> #1423: William Stein: bug/issue in python.eval from sage
> #1425: Mike Hansen, William Stein: wrong automatic simplification of
>        pow
> #1442: Mike Hansen: fix wrong statement in calculus.py
> #1447: Burcin Erocal: Polybori permissions issues [fixed in
>        polybori-0.1-r5.spkg]
> #1454: William Stein: Change the prompt for sage -sh
> #1460: William Stein, Carl Witty: bug in float( ... ) conversion in
>        calculus
> #1461: William Stein: implement general subs_expr for calculus
>        expressions
> #1472: Josh Kantor: gnuplotpy optional package doesn't work with numpy
>        [updated optional spkg]
> #1473: Robert Bradschaw: make Java3D usable from command line as well
>        as notebook
> #1480: William Stein: implement P.show() for mathematica elements --
>        nice mathematica graphics in the sage notebook!
> #1491: William Stein: improve conversion from interface to sage
>        objects (i.e., the dot sage method)
> #1494: William Stein: bug coercing from maximal order of cyclotomic
>        field into cyclotomic field
> #1502: Mike Hansen: calculus -- bug in argument ordering for formal
>        functions
> #1506: William Stein: NTL.spkg - dumb intentional error during the
>        build
> #1507: William Stein: document how to use pylab / matlab style
>        plotting from sage
> #1513: Michael Abshoff: FLINT install uses make -B, which isn't an
>        option on (slightly) older make versions
> #1515: Robert Bradshaw: fix ParametricSurface bug
> #1518: William Stein: cache computing order of elliptic curve over
>        finite field
> #1519: William Stein: hg problem applying tickets via trac url: remove
>        characters after "?" from name
> #1520: Michael Abshoff: prebuilt 2.9-alpha7 osx ppc binary has
>        hardcoded paths
>
> Merged in alpha7:
>
> #1340: Robert Bradshaw: %cython broken if directory name contains
>        spaces
> #1398: Mike Hansen: Functions on integers which are not
>        object-oriented
> #1462: William Stein: make sure that not to update the timestamp
>        cache if compilation fails
> #1487: Michael Abshoff: ATLAS breaks with parallel make
> #1488: William Stein: fix output of symbolic vectors
> #1489: William Stein: serious bug in calculus maxima parsing
> #1490: Michael Abhsoff: fix numerical noise doctest failure in
>        numerical/test.py
> #1492: Yi Qiang: update sqlite.spkg to 3.5.3.p1 [this also closes
>        #1152, #1202]
> #1493  Burcin Erocal: polybori doesn't free m4ri data on exit
> #1497: Josh Kantor: Configure ATLAS properly for 32 bit user space
>        on 64 bit CPU
> #1499: Michael Abshoff: fix import issues related to ATLAS BLAS on
>        non-OSX
> #1500: William Stein: solve_mod -- implement solving modulo n in sage
> #1501: Josh Kantor: udpate cvxopt to use ATLAS on Linux
>
> Merged in alpha6:
>
> #469: Burcin Erocal: Add BoolenPolynomialRing to global namespace.
>       With this patch PolyBoRi's integration should be finished
> #823: Josh Kantor, Michael Abshoff: make atlas standard in Sage
> #1430: Josh Kantor: sparse eigenvalues and splines [scipy sandbox]
> #1434: Josh Kantor: cut sandbox directory out of scipy spkg
> #1462: William Stein: speed up "sage -b" -- don't do anything cython
>        stuff if no .pyx, .pxd, or .pxi file changes
> #1463: William Stein: polymake package has wrong cddlib,gmp versions
> #1479: William Stein: Fix doctest failure fallout from #1296
>
> Merged in alpha5:
>
> #469: Burcin Erocal: partial merge of the PolyBoRi wrapper, updated
>       PolyBoRi.spkg [still some code to merge, so disable doctests
>       for now, BooleanRing is missing]
> #1189: Ondrej Certik: SymPy <-> SAGE automatic conversion
> #1235: William Stein: doctest fixes for 32 bit Linux
> #1296: Robert Bradshaw: Fast permutation arithmatic [with bugfixes
>        and debugging by William Stein, Michael Abshoff, Carl Witty
>        and Mike Hansen - this was a real team effort :)]
> #1394: Robert Miller: make plot documentation readable in graph.py
> #1450: William Stein: update the error message for using maple/
>        mathmatica from sage
> #1453: William Stein: fix cython dependency computation for new files
>        [later reverted, due to issues with #1366]
> #1455: Michael Abshoff: Fix OSX doctest failures due to numerical
>        noise
>
> Merged in alpha4:
>
> No tickets, but build fixes for gfan and R by William Stein
>
> Merged in alpha3:
>
> #1366: Bobby Moretti, William Stein: speed up "sage -br" -- make it
>        cache the dependency diagram instead of computing it every
>        time [later reverted]
> #1411: William Stein: pdate the README.txt file included in Sage
> #1416: William Stein, Mike Hansen, Josh Kantor: make R standard
>        component
> #1427: Josh Kantor: rpy doesn't build on osx 10.4
> #1433: William Stein: Fix some documentation typos pointed out by
>        Rich Morin
> #1436: Michael Abshoff, Bill Hart: Update FLINT.spkg to 1.02 relase
> #1437: Michael Abshoff: fix spkg-check in FLINT to work "stand alone"
> #1444: William Stein: fix some serious hard-coding issues that break
>        all binary installs
> #1445: Mike Hansen: symmetrica's longints need to be converted
>
> Merged in alpha2:
>
> #469: Burcin Erocal: add PolyBoRi.spkg [integration patch still
>       missing]
> #1164: Mike Hansen: Error in tutorial documentation about %hist
> #1167: Mike Hansen: Spelling errors in documentation
> #1182: Mike Hansen: update freetype.spkg to 2.3.5
> #1235: William Stein: bug solving equations using maxima
> #1243: Mike Hansen: Minor spelling mistakes in documentation
> #1267: Mike Hansen: documentation for piecewise does not show up in
>        notebook
> #1288: Mike Hansen: misformating of some of the reference manual in
>        live version; also out of date
> #1324: Carl Witty: 2.8.14: doctest failure in sage/rings/real_rqdf.pyx
>        on FC6, x86-64
> #1348: Mike Hansen: Incorporate Jan Groenewald's documentation fixes
> #1378: Mike Hansen: add ssh-client (i.e., ssh-keygen) as a required
>        package in various places in the docs
> #1412: Tom Boothby: creating directory in notebook cell #x makes
>        evaluation of cell #x hang
> #1417: Mike Hansen: update symmetrica.spkg to 2.0
> #1420: Mike Hansen: documentation typo
> #1435: Michael Abshoff: Update FLINT.spkg to 1.01
>
> Merged in alpha1:
>
> #491: Michael Abshoff: gcc 4.3: fix givaro build due to ::memcpy
>       failure
> #492: Craig Citro, David Harvey: gcc 4.3: fix ntl_wrap.cc in
>       sage_c_lib [this was some time ago]
> #1260: Michael Abshoff, Bill Hart: update to FLINT 1.0 and clean
>        up spkg-install
> #1403: John Cremona: Analog fixes for termination issues for
>        the other mwrank binaries
> #1406: Mike Hansen, William Stein: bug in coercion of multivariate
>        polynomials
> #1410: Michael Abshoff: fix leftovers from 1256, make mwrank
>        binaries link dynamically, fix cython doctest issue
>
> Merged in alpha0:
>
> #1002: Bill Page: Update clisp to the 2.43 release [later reverted]
> #1256: Michael Abshoff: mwrank*.spkg now redundant, included in
>        cremona*.spkg
> #1337: Carl Witty: technically incorrect code in integer_mod.pyx
> #1403: John Cremona: mwrank has termination issues
> #1405: Michael Abshoff, Carl Witty: gcc 4.3-snapshot: cremona
>        compile fixes.
>
> Reviewers: Carl Witty, William Stein, Mike Hansen, Robert Miller,
>            Craig Citro, Michael Abshoff; apologies to anybody I
>            forgot.
>
> Feeback: Jaap Spies, apologies to anybody I forgot.
>
>
>
> --
> William Stein
> Associate Professor of Mathematics
> University of Washington
> http://wstein.org
>
> >
>

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