this is a sign of /bin/sh being var from bash,
see https://groups.google.com/d/msg/sage-devel/Hb0OkqaSy4E/CnTSeAF3CAAJ
On Tuesday, December 30, 2014 at 5:48:00 PM UTC, Paweł Bogdan wrote:
>
> Sure
>
> *config.log*:
> This file contains any messages produced by compilers while
> running configure, to aid debugging if configure makes a mistake.
>
> It was created by Sage configure 6.4.1, which was
> generated by GNU Autoconf 2.69. Invocation command line was
>
> $ ./configure x make
>
> ## --------- ##
> ## Platform. ##
> ## --------- ##
>
> hostname = iota
> uname -m = x86_64
> uname -r = 2.6.38.8
> uname -s = Linux
> uname -v = #7 SMP Sat Aug 2 23:41:34 CEST 2014
>
> /usr/bin/uname -p = unknown
> /bin/uname -X = unknown
>
> /bin/arch = x86_64
> /usr/bin/arch -k = unknown
> /usr/convex/getsysinfo = unknown
> /usr/bin/hostinfo = unknown
> /bin/machine = unknown
> /usr/bin/oslevel = unknown
> /bin/universe = unknown
>
> PATH: <MY_HOME>/sage-6.4.1/src/bin
> PATH: <MY_HOME>/sage-6.4.1/local/bin
> PATH: /var/sge6_2u5/bin/lx24-amd64
> PATH: /usr/bin
> PATH: /bin
> PATH: /usr/sbin
> PATH: /sbin
> PATH: /usr/local/bin
>
>
> ## ----------- ##
> ## Core tests. ##
> ## ----------- ##
>
> configure:2354: checking for a BSD-compatible install
> configure:2422: result: /usr/bin/install -c
> configure:2433: checking whether build environment is sane
> configure:2488: result: yes
> configure:2639: checking for a thread-safe mkdir -p
> configure:2678: result: /bin/mkdir -p
> configure:2685: checking for gawk
> configure:2715: result: no
> configure:2685: checking for mawk
> configure:2701: found /bin/mawk
> configure:2712: result: mawk
> configure:2723: checking whether make sets $(MAKE)
> configure:2745: result: yes
> configure:2774: checking whether make supports nested variables
> configure:2791: result: yes
> configure:2919: checking whether to enable maintainer-specific portions of
> Makefiles
> configure:2928: result: yes
> configure:2976: checking build system type
> configure:2987: error: bash config/config.sub x failed
>
> ## ---------------- ##
> ## Cache variables. ##
> ## ---------------- ##
>
> ac_cv_build=
> ac_cv_env_CCC_set=
> ac_cv_env_CCC_value=
> ac_cv_env_CC_set=
> ac_cv_env_CC_value=
> ac_cv_env_CFLAGS_set=
> ac_cv_env_CFLAGS_value=
> ac_cv_env_CPPFLAGS_set=
> ac_cv_env_CPPFLAGS_value=
> ac_cv_env_CPP_set=
> ac_cv_env_CPP_value=
> ac_cv_env_CXXCPP_set=
> ac_cv_env_CXXCPP_value=
> ac_cv_env_CXXFLAGS_set=
> ac_cv_env_CXXFLAGS_value=
> ac_cv_env_CXX_set=
> ac_cv_env_CXX_value=
> ac_cv_env_FCFLAGS_set=
> ac_cv_env_FCFLAGS_value=
> ac_cv_env_FC_set=
> ac_cv_env_FC_value=
> ac_cv_env_LDFLAGS_set=
> ac_cv_env_LDFLAGS_value=
> ac_cv_env_LIBS_set=
> ac_cv_env_LIBS_value=
> ac_cv_env_build_alias_set=set
> ac_cv_env_build_alias_value=x
> ac_cv_env_host_alias_set=set
> ac_cv_env_host_alias_value=x
> ac_cv_env_target_alias_set=set
> ac_cv_env_target_alias_value=x
> ac_cv_path_install='/usr/bin/install -c'
> ac_cv_path_mkdir=/bin/mkdir
> ac_cv_prog_AWK=mawk
> ac_cv_prog_make_make_set=yes
> am_cv_make_support_nested_variables=yes
>
> ## ----------------- ##
> ## Output variables. ##
> ## ----------------- ##
>
> ACLOCAL='${SHELL} <MY_HOME>/sage-6.4.1/config/missing aclocal-1.14'
> AMDEPBACKSLASH=''
> AMDEP_FALSE=''
> AMDEP_TRUE=''
> AMTAR='$${TAR-tar}'
> AM_BACKSLASH='\'
> AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
> AM_DEFAULT_VERBOSITY='1'
> AM_V='$(V)'
> AUTOCONF='${SHELL} <MY_HOME>/config/missing autoconf'
> AUTOHEADER='${SHELL} <MY_HOME>/sage-6.4.1/config/missing autoheader'
> AUTOMAKE='${SHELL} <MY_HOME>/sage-6.4.1/config/missing automake-1.14'
> AWK='mawk'
> CC=''
> CCDEPMODE=''
> CFLAGS=''
> CPP=''
> CPPFLAGS=''
> CXX=''
> CXXCPP=''
> CXXDEPMODE=''
> CXXFLAGS=''
> CYGPATH_W='echo'
> DEFS=''
> DEPDIR=''
> ECHO_C=''
> ECHO_N='-n'
> ECHO_T=''
> EGREP=''
> EXEEXT=''
> FC=''
> FCFLAGS=''
> GCC_VERSION=''
> GREP=''
> GXX_VERSION=''
> INSTALL_DATA='${INSTALL} -m 644'
> INSTALL_PROGRAM='${INSTALL}'
> INSTALL_SCRIPT='${INSTALL}'
> INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
> LDFLAGS=''
> LIBOBJS=''
> LIBS=''
> LTLIBOBJS=''
> MAINT=''
> MAINTAINER_MODE_FALSE='#'
> MAINTAINER_MODE_TRUE=''
> MAKEINFO='${SHELL} <MY_HOME>/sage-6.4.1/config/missing makeinfo'
> MKDIR_P='/bin/mkdir -p'
> OBJEXT=''
> PACKAGE='sage'
> PACKAGE_BUGREPORT='sage-...@googlegroups.com <javascript:>'
> PACKAGE_NAME='Sage'
> PACKAGE_STRING='Sage 6.4.1'
> PACKAGE_TARNAME='sage'
> PACKAGE_URL=''
> PACKAGE_VERSION='6.4.1'
> PATH_SEPARATOR=':'
> PERL=''
> SET_MAKE=''
> SHELL='bash'
> STRIP=''
> VERSION='6.4.1'
> ac_ct_CC=''
> ac_ct_CXX=''
> ac_ct_FC=''
> am__EXEEXT_FALSE=''
> am__EXEEXT_TRUE=''
> am__fastdepCC_FALSE=''
> am__fastdepCC_TRUE=''
> am__fastdepCXX_FALSE=''
> am__fastdepCXX_TRUE=''
> am__include=''
> am__isrc=''
> am__leading_dot='.'
> am__nodep=''
> am__quote=''
> am__tar='$${TAR-tar} chof - "$$tardir"'
> am__untar='$${TAR-tar} xf -'
> bindir='${exec_prefix}/bin'
> build='x'
> build_alias='x'
> build_cpu=''
> build_os=''
> build_vendor=''
> datadir='${datarootdir}'
> datarootdir='${prefix}/share'
> docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
> dvidir='${docdir}'
> exec_prefix='NONE'
> found_ar=''
> found_dpkg=''
> found_dpkg_arch=''
> found_latex=''
> found_m4=''
> found_ranlib=''
> found_strip=''
> host='x'
> host_alias='x'
> host_cpu=''
> host_os=''
> host_vendor=''
> htmldir='${docdir}'
> includedir='${prefix}/include'
> infodir='${datarootdir}/info'
> install_sh='${SHELL} <MY_HOME>/sage-6.4.1/config/install-sh'
> libdir='${exec_prefix}/lib'
> libexecdir='${exec_prefix}/libexec'
> localedir='${datarootdir}/locale'
> localstatedir='${prefix}/var'
> mandir='${datarootdir}/man'
> mkdir_p='$(MKDIR_P)'
> oldincludedir='/usr/include'
> pdfdir='${docdir}'
> prefix='NONE'
> program_transform_name='s,x,x,'
> psdir='${docdir}'
> sbindir='${exec_prefix}/sbin'
> sharedstatedir='${prefix}/com'
> sysconfdir='${prefix}/etc'
> target_alias='x'
>
> ## ----------- ##
> ## confdefs.h. ##
> ## ----------- ##
>
> /* confdefs.h */
> #define PACKAGE_NAME "Sage"
> #define PACKAGE_TARNAME "sage"
> #define PACKAGE_VERSION "6.4.1"
> #define PACKAGE_STRING "Sage 6.4.1"
> #define PACKAGE_BUGREPORT "sage-...@googlegroups.com <javascript:>"
> #define PACKAGE_URL ""
> #define PACKAGE "sage"
> #define VERSION "6.4.1"
>
> configure: exit 1
>
>
> *install.log:*
>
> *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***
> HISTFILE=<MY_HOME>/.history
> HISTFILESIZE=1000
> HISTSIZE=1000
> HOME=<MY_HOME>
> HOSTNAME=iota
> JAVA_HOME=/usr/lib64/jvm/java
> KRB5CCNAME=FILE:/tmp/krb5cc_704_Unsm60
> LESSOPEN=|lesspipe.sh %s
> LOGNAME=bogdan
>
> LS_COLORS=no=00:fi=00:di=01;34:ln=01;36:pi=33:so=01;35:bd=01;33:cd=01;33:or=01;05;37;41:mi=01;05;37;41:ex=32:*.sh=01;32:*.csh=01;32:*.bat=01;32:*.btm=01;32:*.cmd=01;32:*.com=01;32:*.exe=01;32:*.7z=01;31:*.7zip=01;31:*.arj=01;31:*.bz=01;31:*.bz2=01;31:*.cpio=01;31:*.deb=01;31:*.gz=01;31:*.img=01;31:*.lha=01;31:*.lzh=01;31:*.lzma=01;31:*.rar=01;31:*.rpm=01;31:*.tar=01;31:*.taz=01;31:*.tgz=01;31:*.tpz=01;31:*.trpm=01;31:*.tz=01;31:*.xz=01;31:*.z=01;31:*.Z=01;31:*.zip=01;31:*.zoo=01;31:*.bmp=01;35:*.cdr=01;35:*.gif=01;35:*.jpeg=01;35:*.jpg=01;35:*.JPG=01;35:*.mng=01;35:*.pbm=01;35:*.pcx=01;35:*.pgm=01;35:*.png=01;35:*.ppm=01;35:*.svg=01;35:*.tga=01;35:*.tif=01;35:*.tiff=01;35:*.xbm=01;35:*.xcf=01;35:*.xpm=01;35:*.asf=01;37:*.asx=01;37:*.au=01;37:*.avi=01;37:*.m1v=01;37:*.mid=01;37:*.mkv=01;37:*.mp3=01;37:*.mp4=01;37:*.mpg=01;37:*.mpe=01;37:*.mpeg=01;37:*.mod=01;37:*.mov=01;37:*.ogg=01;37:*.qt=01;37:*.rm=01;37:*.ram=01;37:*.s3m=01;37:*.vob=01;37:*.voc=01;37:*.wav=01;37:*.wma=01;37:*.wmv=01;37:*.xm=01;37:*.abw=36:*.bib=36:*.doc=36:*.dot=36:*.dvi=36:*.eps=36:*.info=36:*.kpr=36:*.me=36:*.ms=36:*.ods=36:*.odt=36:*.ps=36:*.pdf=36:*.pps=36:*.ppt=36:*.rtf=36:*.stw=36:*.sxc=36:*.sxw=36:*.tex=36:*.texi=36:*.texinfo=36:*.tm=36:*.txt=36:*.wri=36:*.xls=36:*.xlw=36:*.cgi=33:*.css=33:*.htm=33:*.html=33:*.php=33:*.phtml=33:*.ac=01;33:*.am=01;33:*.c=01;33:*.cc=01;33:*.cpp=01;33:*.diff=01;33:*.f=01;33:*.h=01;33:*.in=01;33:*.o=01;33:*.patch=01;33:*.po=01;33:*.pot=01;33:*.s=01;33:*.spec=01;33:
> MAIL=/var/mail/bogdan
> MAILCHECK=60
> MAKE=make
> MAKEFLAGS=
> MAKELEVEL=1
>
> MANPATH=/var/sge6_2u5/man:/usr/local/man:/usr/share/man:/usr/man:/usr/X11R6/man
> MFLAGS=
>
> PATH=<MY_HOME>/sage-6.4.1/src/bin:<MY_HOME>/sage-6.4.1/local/bin:/var/sge6_2u5/bin/lx24-amd64:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin
> PWD=<MY_HOME>/sage-6.4.1/build
> PYTHONPATH=<MY_HOME>/sage-6.4.1/local
> SAGE_EXTCODE=<MY_HOME>/sage-6.4.1/local/share/sage/ext
> SAGE_LOCAL=<MY_HOME>/sage-6.4.1/local
> SAGE_LOGS=<MY_HOME>/sage-6.4.1/logs/pkgs
> SAGE_PARALLEL_SPKG_BUILD=
> SAGE_ROOT=<MY_HOME>/sage-6.4.1
> SAGE_SPKG_INST=<MY_HOME>/sage-6.4.1/local/var/lib/sage/installed
> SAGE_SRC=<MY_HOME>/sage-6.4.1/src
> SAGE_VERSION=6.4.1
> SGE_CELL=default
> SGE_CLUSTER_NAME=p6444
> SGE_EXECD_PORT=6445
> SGE_QMASTER_PORT=6444
> SGE_ROOT=/var/sge6_2u5
> SHELL=/bin/bash
> SHLVL=3
> SSH_CLIENT=149.156.75.40 56445 22
> SSH_CONNECTION=149.156.75.40 56445 149.156.75.100 22
> SSH_TTY=/dev/pts/5
> TERM=xterm
> TMP=<MY_HOME>/tmp
> TMPDIR=<MY_HOME>/tmp
> USER=bogdan
> _=/usr/bin/env
> ***********************************************
> make[1]: Entering directory `<MY_HOME>/sage-6.4.1/build'
> make[1]: Warning: File `Makefile' has modification time 1.5 s in the future
> make base
> make[2]: Entering directory `<MY_HOME>/sage-6.4.1/build'
> make[2]: Warning: File `Makefile' has modification time 1.5 s in the future
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... no
> checking for mawk... mawk
> checking whether make sets $(MAKE)... yes
> checking whether make supports nested variables... yes
> checking whether to enable maintainer-specific portions of Makefiles... yes
> configure: WARNING: you should use --build, --host, --target
> configure: WARNING: you should use --build, --host, --target
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... no
> checking for mawk... mawk
> checking whether make sets $(MAKE)... yes
> checking whether make supports nested variables... yes
> checking whether to enable maintainer-specific portions of Makefiles... yes
> checking build system type... Invalid configuration `x': machine `x' not
> recognized
> configure: error: bash config/config.sub x failed
> If you would like to try to build Sage anyway (to help porting),
> export the variable 'SAGE_PORT' to something non-empty.
> make[2]: *** [<MY_HOME>/sage-6.4.1/local/var/lib/sage/installed/prereq]
> Error 1
> make[2]: Leaving directory `<MY_HOME>/sage-6.4.1/build'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `<MY_HOME>/sage-6.4.1/build'
>
> real 0m1.641s
> user 0m0.170s
> sys 0m0.380s
> ***************************************************************
> Error building Sage.
>
> The following package(s) may have failed to build:
>
> The build directory may contain configuration files and other potentially
> helpful information. WARNING: if you now run 'make' again, the build
> directory will, by default, be deleted. Set the environment variable
> SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.
>
>
> Regards
> Paweł
>
>
>
> W dniu wtorek, 30 grudnia 2014 18:27:56 UTC+1 użytkownik Volker Braun
> napisał:
>>
>> Can you post the full output and the config.log?
>>
>> On Tuesday, December 30, 2014 4:32:42 PM UTC+1, Paweł Bogdan wrote:
>>>
>>> Hi!
>>>
>>> I have access (but not admin privileges) to very strong computer. I'd
>>> like to perform some calculations using sage. As I read, it is advised to
>>> build sage to avoid some further errors, so I put the source zip, unpacked
>>> it and tried to run 'make'. I've got (I think the whole output isn't
>>> necessary):
>>>
>>> checking build system type... Invalid configuration `x': machine `x' not
>>> recognized
>>> configure: error: bash config/config.sub x failed
>>> If you would like to try to build Sage anyway (to help porting),
>>> export the variable 'SAGE_PORT' to something non-empty.
>>>
>>> I wasn't told what linux it is exactly - just it is 64-bit version.
>>>
>>> Do you have any suggestions what non-empty value should be provided?
>>>
>>> Best regards
>>> Paweł Bogdan
>>>
>>
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