I use the command samtools sort -m 4G -@ 8 -o L002Sorted.bam -O bam L002.bam
but I get an error [bam_sort] no prefix specified for temporary files (use -T option) However, the documentation states "either -O or -T is required". I specified -O, so why is there an error when I don't specify -T ? -------------------------------------- Dario Strbenac PhD Student University of Sydney Camperdown NSW 2050 Australia ------------------------------------------------------------------------------ Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk _______________________________________________ Samtools-help mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/samtools-help
