Good morning, I am wondering if it is possible to call only read depths from single nucleotides using "bcftools call -c². At the moment I am getting also depth reads for some oligomers and some coordinates are repeated for this reason. Thank you in advance.
Regards, João Dias -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.
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