Hi, I have a question about the command mpileup for a multisample calling. There is a maximux or a reccomended number of bam file to use in a multisample calling? I would like perform a mpileup on all my samples (448). Do I need to divide them in batch for time reason or for the performace of the tool?
Thanks in advance. Dott.ssa Flavia Palombo PhD Student Laboratorio di Genetica Medica Dipartimento di Sc. Mediche e Chirurgiche Policlinico S.Orsola-Malpighi-Università di Bologna, Pad.11 Via Massarenti 9, 40138 Bologna Tel. 051-2088387 Fax 051-2088416 e-mail [email protected]
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