Hey Terry, see BlockCompressedOutputStream in HTSJDK <https://github.com/samtools/htsjdk/blob/master/src/java/htsjdk/samtools/util/BlockCompressedOutputStream.java> .
N On Fri, Nov 13, 2015 at 3:20 PM, Terry Casstevens <[email protected]> wrote: > Dear Samtools, > > Can someone point me to the Java code that can bgzip a file? > > Currently I only know how to do that with bgzip from the command line. > > Thank you, > > Terry > > > ------------------------------------------------------------------------------ > _______________________________________________ > Samtools-devel mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/samtools-devel >
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