Hi, I ran into a problem compiling a fresh samtools from git. Here's the problem and solution:
git clone https://github.com/samtools/samtools.git git clone https://github.com/samtools/htslib.git cd htslib make cd ../samtools make Give me this error: In file included from bam_cat.c:44: ../htslib/htslib/cram.h:391: error: expected declaration specifiers or ‘...’ before ‘va_list’ make: *** [bam_cat.o] Error 1 This can be solved by putting #include <stdarg.h> in htslib/htslib/cram.h So if somebody could fix this in the git repository, that would be peachy. I'm runing RHEL 5.10 with gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-54) Regards, Ivo Palli ------------------------------------------------------------------------------ _______________________________________________ Samtools-help mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/samtools-help
