On 16 Feb 2016, at 11:44, Stephane Plaisance <[email protected]> wrote: > I get the following on OSX 10.10.5 [...] > > gcc: error: unrecognized command line option '-rdynamic'
See https://sourceforge.net/p/samtools/mailman/message/34699333/ ; most GCC compiler drivers understand this option, but apparently not the MacPorts one you have on OS X. We will add to the configure script to detect whether this option will be accepted, but in the meantime the previous response shows you how to work around this and build samtools successfully. John -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. ------------------------------------------------------------------------------ Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140 _______________________________________________ Samtools-help mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/samtools-help
