Hi dear:
Thanks for your attention.I got some problems when using samtools.
The VCF file contain an entry:
Supercontig_1.1 104341 . G A,T,C 126 .
DP=9;VDB=0.0030;AF1=1;AC1=2;DP4=0,0,4,4;MQ=60;FQ=-45 GT:PL:DP:GQ
1/1:159,18,0,158,8,155,158,8,153,155:8:33
There are 3 ALTs and the PL contain 10 fields.I can not get the
meaning of the 10 fields.Should they be 9?How to unstand the DP4 in this case?
Thanks a lot ;
Best Regards,
yuzhang
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