Hello,
I am wondering if anyone has advice for parameters to use with
samtools/bcftools for detecting SNPs in single-cells? I have been using
default settings with both freebayes and samtools but freebayes seems to
detect at least ~10-20x more variants than samtools.
Any help would be more than appreciated.
Thank you,
Trevor
------------------------------------------------------------------------------
Transform Data into Opportunity.
Accelerate data analysis in your applications with
Intel Data Analytics Acceleration Library.
Click to learn more.
http://pubads.g.doubleclick.net/gampad/clk?id=278785231&iu=/4140
_______________________________________________
Samtools-help mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/samtools-help
