Hi,all
I wonder what does DV mean in indel? It seems to be high-quality IDV.
##INFO=<ID=IDV,Number=1,Type=Integer,Description="Maximum number of reads
supporting an indel">
##FORMAT=<ID=DV,Number=1,Type=Integer,Description="Number of high-quality
non-reference bases">
But I got an insertion which DV larger than IDV
7 128533516 . C CA 65 PASS
INDEL;IDV=2;IMF=0.0181818;DP=110;VDB=0.968566;SGB=-0.616816;MQSB=0.8;MQ0F=0;ICB=1;HOB=0.5;AC=1;AN=2;DP4=0,1,2,4;MQ=48
GT:PL:DP:DV 0/1:98,0,8:7:6
Could anybody help?
[email protected]
------------------------------------------------------------------------------
Find and fix application performance issues faster with Applications Manager
Applications Manager provides deep performance insights into multiple tiers of
your business applications. It resolves application problems quickly and
reduces your MTTR. Get your free trial!
https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
_______________________________________________
Samtools-help mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/samtools-help