Hi Stephen,
Most of my comments were in the context of reducing disk seeks. Using an SSD
kinda eliminates that penalty. :-)
It is unclear why your SSD writes big blocks slower than small blocks. SSD's
are very complex little devices. Their write performance depends so much on
the firmware's ability to have pre-erased, ready-to-write sectors (since
erasing is slow), as well as writing on proper boundaries (like 'advanced
format' 4k sector drives) to avoid read/modify/write cycles. TRIM/discard
support is vital to maintaining performance over time. In one EL5 system, I
have a md RAID0 (thus no TRIM) that has the *worst* random write performance of
any system (including 'spinning rust' hard drives) now that it's aged and the
firmware basically doesn't have any free pre-erased blocks.
Thanks for showing your results. It's always good to test.
Using similar dd commands to yours, on a traditional hard drive, I get about 37
MB/sec (with a lot of disk seeking noise) with 32K or 8M blocks; with bs=2G I
get about 48 MB/s. Not as much difference as I would have expected, but in my
case my output file might not have been very far from the beginning of the disk
(hard to tell with LVM), so seeks might not have been very distant. There was
essentially no disk seeking with bs=2G. Throw 'iflag=direct oflag=direct' with
32KB blocks and I drop to 30 MB/s.
If you're reading/writing to different spindles, then you want reasonably small
block sizes to increase parallelism between the reading and writing. I.e., you
don't want to wait for a 2GB read to complete before starting a write. In that
case, letting the VM system handle writing in the background in parallel works
fine. Optimize your read/write sizes for your device. E.g., RAID devices
typically have 64 KB to 256 KB stripes, so you want to be at least that big or
some multiple thereof.
Regards,
Chris
On 02/06/2012 12:47 PM, Stephen J. Gowdy wrote:
Hi Chris,
I understand using lager than 32kB block size can help the
throughput but I'd doubt you'd get advantage with a 2GB block size over a
8MB block size for most devices. It may also be due to my laptop only
having 4GB of RAM but it is much better to use 8MB rather than 2GB for my
SSD drive;
[root@antonia ~]# time dd if=/dev/sda of=/scratch/gowdy/test bs=8MB count=256
256+0 records in
256+0 records out
2048000000 bytes (2.0 GB) copied, 36.1101 s, 56.7 MB/s
real 0m36.125s
user 0m0.002s
sys 0m2.420s
root@antonia ~]# time dd if=/dev/sda of=/scratch/gowdy/test bs=2GB count=1
1+0 records in
1+0 records out
2000000000 bytes (2.0 GB) copied, 56.1444 s, 35.6 MB/s
real 0m56.738s
user 0m0.001s
sys 0m14.715s
(oops, and I should have said 8M and 2G bs I guess). 2MB buffer isn't much
slower;
[root@antonia ~]# time dd if=/dev/sda of=/scratch/gowdy/test bs=2MB count=1024
1024+0 records in
1024+0 records out
2048000000 bytes (2.0 GB) copied, 38.4204 s, 53.3 MB/s
real 0m38.781s
user 0m0.004s
sys 0m2.410s
regards,
Stephen.
On Mon, 6 Feb 2012, Chris Schanzle wrote:
It's a shame the original question didn't explain what and why he was trying
to do something with these large blocks.
Huge block sizes are useful if you have lots of ram and are copying very
large files on the same set of spindles. This minimizes disk seeking caused
by head repositioning for reads and writes and is vastly more efficient than
say, "cp" which often uses at most 32 KB reads/writes and relies on the VM
system to flush the writes (buffered by dirtying memory pages) pages as it
deems appropriate (tunables in /proc/sys/vm/dirty*).
Anyway, let's look at what system calls 'dd' does:
$ strace dd if=/dev/zero of=/dev/shm/deleteme bs=12G count=1
...
open("/dev/shm/deleteme", O_WRONLY|O_CREAT|O_TRUNC, 0666) = 3
dup2(3, 1) = 1
close(3) = 0
mmap(NULL, 12884914176, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1,
0) = 0x2af98c7a0000
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
12884901888) = 2147479552
write(1,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
2147479552) = 2147479552
close(0) = 0
close(1) = 0
...
(count=2 is also interesting)
Things to notice:
1. strace shows dd is issuing a 12GB read from the input descriptor
(/dev/zero) but is getting a 'short read' from the kernel of 2GB. Short
reads are not an error.
2. The "count=" option in the dd man page specifies that it limits the
number of INPUT blocks. So it writes what it read (2GB) and quits.
So it seems to be working as designed, though perhaps not as you want.
Adding 'iflag=fullblock' will cause dd to perform multiple reads to fill the
input block size.
mmap(NULL, 12884914176, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1,
0) = 0x2b2d8735e000
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
12884901888) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
10737422336) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
8589942784) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
6442463232) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
4294983680) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
2147504128) = 2147479552
read(0,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"..., 24576)
= 24576
write(1, "", 12884901888) = 2147479552
write(1, "", 10737422336) = 2147479552
write(1,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
8589942784) = 2147479552
write(1, "", 6442463232) = 2147479552
write(1,
"\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0"...,
4294983680) = 2147479552
Notice how the writes empty the input 2GB at a time.
Of course, all this reading/writing goes through typical VM buffering, so you
might want to consider direct i/o: iflag=direct and oflag=direct.
Which begs the question: how to encourage the kernel to allow larger
read/write file buffers? Couldn't find that answer easily. Anyone?
-c
On 02/02/2012 12:32 PM, Stephen J. Gowdy wrote:
Hi Andrey,
Why would you want a block size in GB? I don't know what the
actual limit for dd itself is, although it does seem to be exactly 2GiB.
regards,
Stephen.
On Thu, 2 Feb 2012, Andrey Y. Shevel wrote:
Hi Stephen,
thank you for your reply.
======
[root@pcfarm-10 ~]# rpm -qa --queryformat "%{NAME}-%{VERSION}.%{ARCH}\n" |
grep coreutils
policycoreutils-1.33.12.x86_64
policycoreutils-newrole-1.33.12.x86_64
coreutils-5.97.x86_64
policycoreutils-gui-1.33.12.x86_64
=====
And obviously
================
[root@pcfarm-10 ~]# arch
x86_64
===============
The result is prety same as I shown earlier.
And the same I see at CERN
=======================
[lxplus427] /afs/cern.ch/user/s/shevel> dd if=/dev/zero of=/tmp/testx64
bs=3GB count=1
0+1 records in
0+1 records out
2147479552 bytes (2.1 GB) copied, 5.91242 seconds, 363 MB/s
[lxplus427] /afs/cern.ch/user/s/shevel> rpm -q --file /bin/dd
coreutils-5.97-34.el5
[lxplus427] /afs/cern.ch/user/s/shevel> rpm -qa --queryformat
"%{NAME}-%{VERSION}.%{ARCH}\n" | grep coreutil
policycoreutils-1.33.12.x86_64
coreutils-5.97.x86_64
policycoreutils-gui-1.33.12.x86_64
===========================
As far as I understand the main question is "is there 64 bit dd version
which
can operate more then 2GB value for BS in SL anyway?"
Any answer (yes or no) is good to know.
Many thanks,
Andrey
On Wed, 1 Feb 2012, Stephen J. Gowdy wrote:
Date: Wed, 1 Feb 2012 19:10:14 +0100 (CET)
From: Stephen J. Gowdy<go...@cern.ch>
To: Andrey Y. Shevel<she...@bnl.gov>
Cc: SCIENTIFIC-LINUX-USERS@LISTSERV.FNAL.GOV
Subject: Re: coreutils for 64 bit
Exactly.... if you type "man rpm" it will show you how you get it to
print
the arch string (usually i686 or x86_64). Since you seem unabel to read a
man page what you want to type is;
rpm -qa --queryformat "%{NAME}-%{VERSION}.%{ARCH}\n" | grep coreutils
(or miss out the VERSION if you want to see somethign similar to yum)
On Wed, 1 Feb 2012, Andrey Y. Shevel wrote:
Hi Stephen,
thanks for the reply.
I am not sure that I do understand you (sorry for my stupidity).
I have
=======================================
[root@pcfarm-10 ~]# yum list | grep coreutil
Failed to set locale, defaulting to C
coreutils.x86_64 5.97-34.el5 installed
policycoreutils.x86_64 1.33.12-14.8.el5 installed
policycoreutils-gui.x86_64 1.33.12-14.8.el5 installed
policycoreutils-newrole.x86_64 1.33.12-14.8.el5 installed
[root@pcfarm-10 ~]# rpm -q --file /bin/dd
coreutils-5.97-34.el5
=============================================
Presumably all packages are appropriate (they have suffix x86_64) as
shown
by yum.
At the same time rpm does show packages without above suffixes
=========================
[root@pcfarm-10 ~]# rpm -qa | grep coreutil
policycoreutils-1.33.12-14.8.el5
policycoreutils-newrole-1.33.12-14.8.el5
coreutils-5.97-34.el5
policycoreutils-gui-1.33.12-14.8.el5
=========================
On Wed, 1 Feb 2012, Stephen J. Gowdy wrote:
Date: Wed, 1 Feb 2012 11:32:40 +0100 (CET)
From: Stephen J. Gowdy<go...@cern.ch>
To: Andrey Y Shevel<she...@bnl.gov>
Cc: SCIENTIFIC-LINUX-USERS@LISTSERV.FNAL.GOV
Subject: Re: coreutils for 64 bit
It says it only copied 2.1GB. You are runnig a 64bit OS. You
reinstalld> the same coreutils package. You need to change the format
of
the package> names from "rpm -qa" if you want to see the architecture
("man rpm"> should help you figure out how).
On Wed, 1 Feb 2012, Andrey Y Shevel wrote:
Hi,
I just paid attention that utility 'dd' uses just 2 GB even I
use> > greater
block size (BS). For example
=====
[root@pcfarm-10 ~]# dd if=/dev/zero of=/mnt/sdb/TestFile-S1 bs=12GB
count=1
0+1 records in
0+1 records out
2147479552 bytes (2.1 GB) copied, 15.8235 seconds, 136 MB/s
============
BTW,
[root@pcfarm-10 ~]# uname -a
Linux pcfarm-10.pnpi.spb.ru 2.6.18-274.17.1.el5xen #1 SMP Tue Jan
10
16:41:16 EST 2012 x86_64 x86_64 x86_64 GNU/Linux
[root@pcfarm-10 ~]# cat /etc/issue
Scientific Linux SL release 5.7 (Boron)
Kernel \r on an \m
I decided to reinstall coreutils:
[root@pcfarm-10 ~]# yum reinstall coreutils.x86_64
Failed to set locale, defaulting to C
Loaded plugins: kernel-module
Setting up Reinstall Process
Resolving Dependencies
--> Running transaction check
---> Package coreutils.x86_64 0:5.97-34.el5 set to be updated
--> Finished Dependency Resolution
Beginning Kernel Module Plugin
Finished Kernel Module Plugin
Dependencies Resolved
===========================================================================================
Package Arch Version
Repository
Size
===========================================================================================
Reinstalling:
coreutils x86_64 5.97-34.el5> > sl-base
3.6 M
Transaction Summary
===========================================================================================
Remove 0 Package(s)
Reinstall 1 Package(s)
Downgrade 0 Package(s)
Total download size: 3.6 M
Is this ok [y/N]: y
Downloading Packages:
coreutils-5.97-34.el5.x86_64.rpm
|> > 3.6
MB
00:05
Running rpm_check_debug
Running Transaction Test
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Installing : coreutils
1/1
Installed:
coreutils.x86_64 0:5.97-34.el5
Complete!
=========================
However after that I see
[root@pcfarm-10 ~]# ls -l /bin/dd
-rwxr-xr-x 1 root root 41464 Jul 26 2011 /bin/dd
[root@pcfarm-10 ~]# rpm -q --file /bin/dd
coreutils-5.97-34.el5
[root@pcfarm-10 ~]# rpm -qa | grep coreutils
policycoreutils-1.33.12-14.8.el5
policycoreutils-newrole-1.33.12-14.8.el5
coreutils-5.97-34.el5
policycoreutils-gui-1.33.12-14.8.el5
i.e. no package with name coreutils.x86_64
I failed to find anything on the topic in scientific linux
mailing> > list.
Does somebody know about dd for 64 bit ?
Many thanks in advance,
Andrey
--
/------------------------------------+-------------------------\
|Stephen J. Gowdy | CERN Office: 8-1-11|
|http://cern.ch/gowdy/ | CH-1211 Geneva 23 |
| | Switzerland |
|EMail: go...@cern.ch | Tel: +41 76 487 2215 |
\------------------------------------+-------------------------/
--
/------------------------------------+-------------------------\
|Stephen J. Gowdy | CERN Office: 8-1-11|
|http://cern.ch/gowdy/ | CH-1211 Geneva 23 |
| | Switzerland |
|EMail: go...@cern.ch | Tel: +41 76 487 2215 |
\------------------------------------+-------------------------/
