Didier
Try using the DTW library in R with a wrapper to python, that seems to work
ok.
http://stackoverflow.com/questions/5695388/dynamic-time-warping-in-python
On Mon, Oct 29, 2012 at 7:09 AM, Didier Vila <[email protected]> wrote:
> Olivier,
>
> Thanks
>
> Didier
>
> Didier Vila, PhD | Risk | CapQuest Group Ltd | Fleet 27 | Rye
> Close | Fleet | Hampshire | GU51 2QQ | Fax: 0871 574 2992 | Email:
> [email protected]
>
>
> -----Original Message-----
> From: Olivier Grisel [mailto:[email protected]]
> Sent: 29 October 2012 14:08
> To: [email protected]
> Subject: Re: [Scikit-learn-general] Dynamic Time Warping measure (DTW)
>
> 2012/10/29 Didier Vila <[email protected]>:
> > Good Afternoon all,
> >
> > Does Scikit learn have the dynamic time warping measure embedded in the
> > framework ?
>
> No.
>
> > If yes, can I use it with clustering/ svm tools ?
> >
> > If not, do you have any other alternatives / suggestions ?
>
> According to the wikipedia article:
> http://en.wikipedia.org/wiki/Dynamic_time_warping , mlpy has an
> implementation.
>
> It should not be too complicated to contribute a cython implementation
> scikit-learn for the pairwise module:
>
>
> https://github.com/scikit-learn/scikit-learn/blob/master/sklearn/metrics/pairwise.py
>
> --
> Olivier
> http://twitter.com/ogrisel - http://github.com/ogrisel
>
>
> ------------------------------------------------------------------------------
> The Windows 8 Center - In partnership with Sourceforge
> Your idea - your app - 30 days.
> Get started!
> http://windows8center.sourceforge.net/
> what-html-developers-need-to-know-about-coding-windows-8-metro-style-apps/
> _______________________________________________
> Scikit-learn-general mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/scikit-learn-general
> This e-mail is intended solely for the addressee, is strictly confidential
> and may also be legally privileged. If you are not the addressee please do
> not read, print, re-transmit, store or act in reliance on it or any
> attachments. Instead, please email it back to the sender and then
> immediately permanently delete it. E-mail communications cannot be
> guaranteed to be secure or error free, as information could be intercepted,
> corrupted, amended, lost, destroyed, arrive late or incomplete, or contain
> viruses. We do not accept liability for any such matters or their
> consequences. Anyone who communicates with us by e-mail is taken to accept
> the risks in doing so. Opinions, conclusions and other information in this
> e-mail and any attachments are solely those of the author and do not
> represent those of CapQuest Group Limited or any of its subsidiaries unless
> otherwise stated. CapQuest Group Limited (registered number 4936030),
> CapQuest Debt Recovery Limited (registered number 3772278), CapQuest
> Investments Limited (registered number 5245825), CapQuest Asset Management
> Limited (registered number 5245829) and CapQuest Mortgage Servicing Limited
> (registered number 05821008) are all limited companies registered in
> England and Wales with their registered offices at Fleet 27, Rye Close,
> Fleet, Hampshire, GU51 2QQ. Each company is a separate and independent
> legal entity. None of the companies have any liability for each other's
> acts or omissions. This communication is from the company named in the
> sender's details above.
>
>
> ------------------------------------------------------------------------------
> The Windows 8 Center - In partnership with Sourceforge
> Your idea - your app - 30 days.
> Get started!
> http://windows8center.sourceforge.net/
> what-html-developers-need-to-know-about-coding-windows-8-metro-style-apps/
> _______________________________________________
> Scikit-learn-general mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/scikit-learn-general
>
--
Leon Palafox, M.Sc
PhD Candidate
Iba Laboratory
+81-3-5841-8436
University of Tokyo
Tokyo, Japan.
------------------------------------------------------------------------------
The Windows 8 Center - In partnership with Sourceforge
Your idea - your app - 30 days.
Get started!
http://windows8center.sourceforge.net/
what-html-developers-need-to-know-about-coding-windows-8-metro-style-apps/
_______________________________________________
Scikit-learn-general mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/scikit-learn-general
