satra,

thanks so much for pointing me to this. much appreciated!

best,
kc

> hi kc,
>
> it's not in scikit learn but we use these quite routinely alongside
> scikit-learn.
>
> https://github.com/scikit-learn/scikit-learn/pull/2730
>
> here is also a set a notebook showing manifold extraction using diffusion
> embedding. the notebook is a little out of date with respect to the code.
> it also contains a basic procrustean alignment as well.
>
> http://nbviewer.ipython.org/urls/dl.dropbox.com/s/qzavpq8pchbh97o/DiffusionMaps-Comparison.ipynb?dl=0
>
> i think the notebook is quite convincing how the diffusion embedding
> methods are superior to the other scikit-learn manifold embedders at least
> for trivial cases.
>
> for full inclusion, besides the powers that be being convinced that this
> is
> a relatively small change and that it's performance outweighs the other
> manifold learning methods, the PR definitely needs to be cleaned up,
> together with full support for sparse matrices. thus far i have been happy
> to just keep the PR and use the code for my needs.
>
> cheers,
>
> satra
>
> On Tue, Sep 16, 2014 at 8:27 PM, <[email protected]> wrote:
>
>> Has anyone worked on the problem of manifold alignment?
>>
>> http://en.wikipedia.org/wiki/Manifold_alignment
>>
>> as described in papers like:
>>
>> "Manifold Alignment without Correspondence"
>> http://ijcai.org/papers09/Papers/IJCAI09-214.pdf
>>
>> or
>>
>> "Data Fusion and Multi-Cue Data Matching by Diffusion Maps"
>> http://people.ee.duke.edu/~lcarin/data_fusion_by_diffusion_maps.pdf
>>
>> or in CH. 5 of "Manifold Learning Theory and Applications"
>>
>> If not, is anyone interested in working on this? I would be happy to
>> help.
>>
>> Best,
>> kc
>>
>>
>>
>>
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