[COOT] views

2010-08-13 Thread Lepore, Bryan
was wondering how to get a view that loops, i.e. starts over.

i.e. something like in vmd where you flick it and it spins indefinitely.

-bryan

Re: [COOT] views

2010-08-13 Thread Paul Emsley

On 13/08/10 17:43, Lepore, Bryan wrote:

was wondering how to get a view that loops, i.e. starts over.

i.e. something like in vmd where you flick it and it spins indefinitely.

   


Well, there is Draw - Spin View  On/Off.

That's about as close as it gets.

Paul.


Re: [COOT] views

2010-08-13 Thread Lepore, Bryan
 Well, there is Draw - Spin View  On/Off.

perfect!

... i was looking in Extensions-Views ... 

-bryan

[COOT] scheme : (toggle-idle-function) for Spin View?

2010-08-13 Thread Lepore, Bryan
trying to see if (toggle-idle-function) will do Draw-Spin View. didn't find it 
in the scheme manual (June, 21 2009 ). 

this should be able to do in scheme, yeah?

-bryan

Re: [COOT] scheme : (toggle-idle-function) for Spin View?

2010-08-13 Thread Paul Emsley

On 13/08/10 19:57, Lepore, Bryan wrote:

trying to see if (toggle-idle-function) will do Draw-Spin View. didn't find it 
in the scheme manual (June, 21 2009 ).

this should be able to do in scheme, yeah?
   


(toggle-idle-spin-function)


Re: [COOT] handling LINK records between symmetry-related atoms

2010-08-13 Thread Paul Emsley

On 13/08/10 22:47, Alejandro Buschiazzo wrote:

Dear all,

I have this protein with zinc atoms that interact with some atoms from
neighbor molecules related by crystallographic symmetry.
When I add the proper LINK records in the pdb (i.e. including the
corresponding symmetry operators in the sym1 and sym2 fields, right
justified columns 60 - 65  67 - 72), coot represents these link bonds
between atoms  of the same ASU..the ones linking symmetry-related
atoms become of course 'very long' in some cases...

am I doing something wrong?



No.  Short-sighted-programmer error :)


is there any workaround?
   


No.  Well, not other than deleting the LINK records.

I'll address it shortly.

Paul.