Re: [COOT] Nucleotide Builder
Oh, I thought you had discovered a new form of RNA. You might want to use phenix's elbow builder module. Then you will have a cif file for the ligand too. On Oct 10, 2008, at 9:36 AM, Daniel Holloway wrote: I'm just interested in taking one residue (a 5'-AMP or 3',5'-ADP with the ribose in the C2'-endo conformation) and using it as the basis for a novel ligand. On Fri, 10 Oct 2008 09:13:57 -0700, William G. Scott <[EMAIL PROTECTED]> wrote: I agree, but why do you want to build B-form RNA? On Oct 10, 2008, at 8:48 AM, Daniel Holloway wrote: I'm using the 'Ideal DNA/RNA...' function. When I try to build A- form RNA, I get what I want. When I ask for B-form RNA, I get DNA! Looks like something to fix... Many thanks
Re: [COOT] Nucleotide Builder
I'm just interested in taking one residue (a 5'-AMP or 3',5'-ADP with the ribose in the C2'-endo conformation) and using it as the basis for a novel ligand. On Fri, 10 Oct 2008 09:13:57 -0700, William G. Scott <[EMAIL PROTECTED]> wrote: >I agree, but why do you want to build B-form RNA? > >On Oct 10, 2008, at 8:48 AM, Daniel Holloway wrote: > >> I'm using the 'Ideal DNA/RNA...' function. When I try to build A- >> form RNA, >> I get what I want. When I ask for B-form RNA, I get DNA! Looks like >> something to fix... >> >> Many thanks
Re: [COOT] Nucleotide Builder
I agree, but why do you want to build B-form RNA? On Oct 10, 2008, at 8:48 AM, Daniel Holloway wrote: I'm using the 'Ideal DNA/RNA...' function. When I try to build A- form RNA, I get what I want. When I ask for B-form RNA, I get DNA! Looks like something to fix... Many thanks
[COOT] Nucleotide Builder
I'm using the 'Ideal DNA/RNA...' function. When I try to build A-form RNA, I get what I want. When I ask for B-form RNA, I get DNA! Looks like something to fix... Many thanks
