Bug#1072648: src:survival: fails to migrate to testing for too long: triggers autopkgtest issues in r-cran-popepi which needs an update

2024-06-05 Thread Johannes Ranke
Am Mittwoch, 5. Juni 2024, 22:27:09 CEST schrieb Dirk Eddelbuettel:
> On 5 June 2024 at 21:55, Paul Gevers wrote:
> | Source: survival
> | Version: 3.5-8-1
> | Severity: serious
> | Control: close -1 3.6-4-1
> | Tags: sid trixie
> | User: release.debian@packages.debian.org
> | Usertags: out-of-sync
> | 
> | Dear maintainer(s),
> | 
> | The Release Team considers packages that are out-of-sync between testing
> | and unstable for more than 30 days as having a Release Critical bug in
> | testing [1]. Your package src:survival has been trying to migrate for 40
> | days [2]. Hence, I am filing this bug. The version in unstable triggers
> | autopkgtest failure in r-cran-popepi.
> | 
> | If a package is out of sync between unstable and testing for a longer
> | period, this usually means that bugs in the package in testing cannot be
> | fixed via unstable. Additionally, blocked packages can have impact on
> | other packages, which makes preparing for the release more difficult.
> | Finally, it often exposes issues with the package and/or
> | its (reverse-)dependencies. We expect maintainers to fix issues that
> | hamper the migration of their package in a timely manner.
> | 
> | This bug will trigger auto-removal when appropriate. As with all new
> | bugs, there will be at least 30 days before the package is auto-removed.
> | 
> | I have immediately closed this bug with the version in unstable, so if
> | that version or a later version migrates, this bug will no longer affect
> | testing. I have also tagged this bug to only affect sid and trixie, so
> | it doesn't affect (old-)stable.
> | 
> | If you believe your package is unable to migrate to testing due to
> | issues beyond your control, don't hesitate to contact the Release Team.
> 
> It is beyond my control that package r-cran-popepi descides to run
> autopkgtests that than hijack and blackmail this package of mine.
> 
> Maybe the maintainers of r-cran-popepi should look at their package tracker
> and eg attempt to update to a _current_ version?  That's how things work at
> CRAN.

A look at the ChangeLog of popEpi confirms that that package just needs an 
update:

News for version 0.4.12
Unit tests
No changes in the package itself — fixed a unit test that used the output of 
survival::summmary.survfit which had improved slightly in 3.6-4.

Should we reassign the bug to r-cran-popepi?

Johannes

> I am really tired of this here in Debian. If the package gets autoremoved,
> so be it. The blame will rest with the so-called maintainer team for these
> R package that are effectively taking down maintained packages of mine.
> 
> Dirk
> 
> | Paul
> | 
> | [1] https://lists.debian.org/debian-devel-announce/2023/06/msg1.html
> | [2] https://qa.debian.org/excuses.php?package=survival
> | 
> | x[DELETED ATTACHMENT OpenPGP_signature.asc, application/pgp-signature]



Bug#861333: r-base: R packages uploaded to Debian before 14 April 2017 that use .C or .Fortran fail to find objects

2017-07-18 Thread Johannes Ranke
Nice. Amazing work. So buster should be covered then.

Now (correct me if I am wrong) if we could adapt your scripts to create 
versioned Breaks: relationships with these packages, this would open the 
possibility to create backports for stretch-backports and jessie-backports-
sloppy, taking advantage of the Debian infrastructure for builds on all 
architectures.

Side note: Regarding backports on CRAN, I have chosen to create a separate 
repository for R >= 3.4.0, so people should be conscious about the issue for R 
package debs when they install it.



Bug#861333: r-base: R packages uploaded to Debian before 14 April 2017 that use .C or .Fortran fail to find objects

2017-05-04 Thread Johannes Ranke
Am Montag, 1. Mai 2017, 14:53:49 schrieb Charles Plessy:

...

> At this point I see 3 options:
> 
>  - For each rebuild, insert a "Breaks" relationship in r-base's control
> file;

This is the solution favoured by me as the maintainer of the backports on CRAN 
(I know, this is the Debian BTS, but nonetheless), as it would just cause 
rebuilds/reinstalls of the packages really affected, assuming that we manage to 
have a versioned Breaks relationship for those packages (e.g. r-cran-spatial 
<= xy).

>  - Increment r-api-3 to r-api-4 (or r-api-3.4, etc.) in order to not have to
> maintain a long list of "Breaks" declarations.  In that case, we have to
> rebuild everything.

Would be OK for me, but seems to cause a lot of work for r-cran-* and r-bioc* 
maintainers

>  - Just rebuild what has to be rebuilt, and do not support partial upgrades,
> which is what has been done until now.

In this case, I would create a new repository on CRAN (again, I know that this 
is not really Debians business), so people would consciously install R 3.4.0 
and not be surprised by packages suddenly failing to find their objects.
 
> Not supporting partial upgrades puts the maintainers of the r-cran and
> r-bioc packages between the hammer and the anvil.

I do not understand this sentence.

> This said, I think that
> we have made constant progresses over the years, so I do not feel shy
> saying "not yet" to the Release team again if needed.



Bug#861333: r-base: R packages uploaded to Debian before 14 April 2017 that use .C or .Fortran fail to find objects

2017-04-27 Thread Johannes Ranke
> | Packages compiled locally can simply be rebuilt using
> | 
> |   update.packages(lib.loc="/usr/local/lib/R/site-library",
> |   checkBuilt=TRUE)
> | 
> | However the packages provided by Debian packages are installed in a
> | directory only writable by privileged users.
> 
> That's irrelevant. You also need to be "privileged" to install a .deb
> package.

Not quite irrelevant, as it was recommended on r-help to Göran, who first 
reported this for Debian, to just use

   update.packages(checkBuilt=TRUE)

which tries to reinstall also the packages in /usr/lib/R/site-library, which 
should be left to the Debian package management.



Bug#804823: Severity and title

2015-11-19 Thread Johannes Ranke
Package: kreversi
Version: 4:4.13.1-1
Followup-For: Bug #804823
Control: severity -1 important

Maybe other games are affected as well.



Bug#804823: Only a dependency missing

2015-11-11 Thread Johannes Ranke
I just discovered that it runs fine after installation of

kde-games-core-declarative

Cheers, Johannes



Bug#804823: kreversi: crashes on start

2015-11-11 Thread Johannes Ranke
Package: kreversi
Version: 4:4.13.1-1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

When I try to start kreversi on jessie, I get


file:///usr/share/kde4/apps/kreversi/qml/Table.qml:107:5: Type CanvasItem 
unavailable 
 CanvasItem { 
 ^ 
file:///usr/share/kde4/apps/kreversi/qml/CanvasItem.qml:25:1: module 
"org.kde.games.core" is not installed 
 import org.kde.games.core 0.1 as KgCore 
 ^ 
QObject::connect: Cannot connect (null)::cellClicked(int,int) to 
KReversiView::onPlayerMove(int,int)
KCrash: Application 'kreversi' crashing...
KCrash: Attempting to start /usr/lib/kde4/libexec/drkonqi from kdeinit
KCrash: Connect sock_file=/home/myuser/.kde/socket-myhost/kdeinit4__0

Kind regards,

Johannes

-- System Information:
Debian Release: 8.2
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable'), (10, 'unstable'), (5, 
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.2.0-1-amd64 (SMP w/8 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages kreversi depends on:
ii  kde-runtime 4:4.14.2-2
ii  libc6   2.19-18+deb8u1
ii  libkdecore5 4:4.14.2-5
ii  libkdegames6abi14:4.14.2-1
ii  libkdeui5   4:4.14.2-5
ii  libqt4-declarative  4:4.8.6+git64-g5dc8b2b+dfsg-3+deb8u1
ii  libqt4-svg  4:4.8.6+git64-g5dc8b2b+dfsg-3+deb8u1
ii  libqtcore4  4:4.8.6+git64-g5dc8b2b+dfsg-3+deb8u1
ii  libqtgui4   4:4.8.6+git64-g5dc8b2b+dfsg-3+deb8u1
ii  libstdc++6  4.9.2-10

Versions of packages kreversi recommends:
ii  khelpcenter4  4:4.14.2-2

kreversi suggests no packages.

-- no debconf information



Bug#781266: r-base-core: Package fails to install when there is no group names "staff" on the system

2015-03-26 Thread Johannes Ranke

Am Donnerstag, 26. März 2015, 12:48:37 schrieb Dirk Eddelbuettel:
> On 26 March 2015 at 18:03, Alexander Schlarb wrote:
> | Package: r-base-core
> | Version: 3.1.1-1+b2
> | Severity: grave
> | Justification: renders package unusable
> | 
> | When installing the package `r-base-core` (or anything that depends on it)
> | on a clean jessie install (not upgraded) then the depricated "staff"
> | group will not
> Uh-oh.  When did 'staff' get deprecated?
> 
> Do we have a list of still-supported groups? [Ok, went looking via a quick
> docker image for 'jessie'.]
> 
> I'll change it to a group I create, something like rpkgs.
> 
> | exist and the calls to `chown root:staff /usr/local/lib/R` and `chown
> | root:staff /usr/local/lib/R/site-library` will fail. This prevents the
> | package (and any dependant packages) from being configured correctly.
> 
> The package is used to widely (eg by all r-cran-* packages) that I am a
> little surprised it has not come up earlier.

For what it's worth, I do not recall having problems with my jessie pbuilder 
chroot (i386) and manually debootstrapped chroots (for amd64 and armel) that I 
used for the recent backport of R 3.1.3 to jessie. I think if I would have had 
to manually add the "staff" group I would remember... I suspect it is not 
really gone yet.

I did not find anything in the draft release notes either, just some transition 
plan in #29007. Alexander, could we be educated further? Even if /usr/local 
were not to be owned by root:staff any more, does this mean the group will be 
gone in jessie?

Johannes

> 
> Dirk
> 
> | -- System Information:
> | Debian Release: 8.0
> | 
> |   APT prefers testing
> |   APT policy: (500, 'testing')
> | 
> | Architecture: amd64 (x86_64)
> | Foreign Architectures: i386
> | 
> | Kernel: Linux 4.0.0-999-lowlatency (SMP w/8 CPU cores; PREEMPT)
> | Locale: LANG=de_AT.UTF-8, LC_CTYPE=de_AT.UTF-8 (charmap=UTF-8)
> | Shell: /bin/sh linked to /bin/dash
> | Init: systemd (via /run/systemd/system)
> | 
> | Versions of packages r-base-core depends on:
> | ii  libblas3 [libblas.so.3]1.2.20110419-10
> | ii  libbz2-1.0 1.0.6-7+b2
> | ii  libc6  2.19-15
> | ii  libcairo2  1.14.0-2.1
> | ii  libgfortran3   4.9.2-10
> | ii  libglib2.0-0   2.42.1-1
> | ii  libgomp1   4.9.2-10
> | ii  libice62:1.0.9-1+b1
> | ii  libjpeg62-turbo1:1.3.1-12
> | ii  liblapack3 [liblapack.so.3]3.5.0-4
> | ii  liblzma5   5.1.1alpha+20120614-2+b3
> | ii  libopenblas-base [liblapack.so.3]  0.2.12-1
> | ii  libpango-1.0-0 1.36.8-3
> | ii  libpangocairo-1.0-01.36.8-3
> | ii  libpaper-utils 1.1.24+nmu4
> | ii  libpcre3   2:8.35-3.3
> | ii  libpng12-0 1.2.50-2+b2
> | ii  libquadmath0   4.9.2-10
> | ii  libreadline6   6.3-8+b3
> | ii  libsm6 2:1.2.2-1+b1
> | ii  libtcl8.5  8.5.17-1
> | ii  libtiff5   4.0.3-12.2
> | ii  libtk8.5   8.5.17-1
> | ii  libx11-6   2:1.6.2-3
> | ii  libxext6   2:1.3.3-1
> | ii  libxss11:1.2.2-1
> | ii  libxt6 1:1.1.4-1+b1
> | ii  ucf3.0030
> | ii  unzip  6.0-16
> | ii  xdg-utils  1.1.0~rc1+git20111210-7.4
> | ii  zip3.0-8
> | ii  zlib1g 1:1.2.8.dfsg-2+b1
> | 
> | Versions of packages r-base-core recommends:
> | iu  r-base-dev 3.1.1-1
> | ii  r-doc-html     3.1.1-1
> | iu  r-recommended  3.1.1-1
> | 
> | Versions of packages r-base-core suggests:
> | pn  ess 
> | iu  r-base-html 3.1.1-1
> | pn  r-doc-info | r-doc-pdf  
> | pn  r-mathlib   
> | 
> | -- no debconf information
-- 
PD Dr. Johannes Ranke
Kronacher Str. 8
79639 Grenzach-Wyhlen


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Bug#469128: gchempaint: crashes on startup

2008-03-03 Thread Johannes Ranke
Package: gchempaint
Version: 0.8.7-1
Severity: grave
Justification: renders package unusable


Hi Daniel,

I just wanted to give the freshly updated gchempaint a try:

  [EMAIL PROTECTED]:~$ gchempaint

  (process:8241): GLib-GObject-CRITICAL **:
  /build/buildd/glib2.0-2.14.6/gobject/gtype.c:2242: initialization
  assertion failed, use IA__g_type_init() prior to this function

  (process:8241): GLib-GObject-CRITICAL **: g_object_new: assertion
  `G_TYPE_IS_OBJECT (object_type)' failed

  (process:8241): GLib-GObject-CRITICAL **: g_object_ref: assertion
  `G_IS_OBJECT (object)' failed
  Segmentation fault

Hope that the above is helpful to find the problem.

Best,

Johannes Ranke



-- System Information:
Debian Release: lenny/sid
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.20-1-amd64 (SMP w/1 CPU core)
Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968)
Shell: /bin/sh linked to /bin/bash

Versions of packages gchempaint depends on:
ii  gconf2 2.20.1-3  GNOME configuration database syste
ii  libart-2.0-2   2.3.20-1  Library of functions for 2D graphi
ii  libatk1.0-01.20.0-1  The ATK accessibility toolkit
ii  libbonobo2-0   2.21.90-1 Bonobo CORBA interfaces library
ii  libbonoboui2-0 2.21.90-1 The Bonobo UI library
ii  libc6  2.7-9 GNU C Library: Shared libraries
ii  libcairo2  1.4.14-1  The Cairo 2D vector graphics libra
ii  libfontconfig1 2.5.0-2   generic font configuration library
ii  libfreetype6   2.3.5-1+b1FreeType 2 font engine, shared lib
ii  libgcc11:4.3.0~rc2-1 GCC support library
ii  libgconf2-42.20.1-3  GNOME configuration database syste
ii  libgcu00.8.6-1   GNOME chemistry utils (library)
ii  libgl1-mesa-glx [libgl 7.0.3~rc2-1   A free implementation of the OpenG
ii  libglade2-01:2.6.2-1 library to load .glade files at ru
ii  libglib2.0-0   2.14.6-1  The GLib library of C routines
ii  libglu1-mesa [libglu1] 7.0.3~rc2-1   The OpenGL utility library (GLU)
ii  libgnome2-02.20.1.1-1The GNOME 2 library - runtime file
ii  libgnomecanvas2-0  2.20.1.1-1A powerful object-oriented display
ii  libgnomeprint2.2-0 2.18.4-1  The GNOME 2.2 print architecture -
ii  libgnomeprintui2.2-0   2.18.2-1  GNOME 2.2 print architecture User 
ii  libgnomeui-0   2.20.1.1-1The GNOME 2 libraries (User Interf
ii  libgnomevfs2-0 1:2.20.1-2GNOME Virtual File System (runtime
ii  libgoffice-0-4 0.4.2-4   Document centric objects library -
ii  libgsf-1-114   1.14.7-2  Structured File Library - runtime 
ii  libgtk2.0-02.12.8-1  The GTK+ graphical user interface 
ii  libgtkglext1   1.2.0-1   OpenGL Extension to GTK+ (shared l
ii  libice62:1.0.4-1 X11 Inter-Client Exchange library
ii  libopenbabel2  2.1.1-2   Convert and manipulate chemical da
ii  liborbit2  1:2.14.10-0.1 libraries for ORBit2 - a CORBA ORB
ii  libpango1.0-0  1.18.4-1  Layout and rendering of internatio
ii  libpng12-0 1.2.15~beta5-3PNG library - runtime
ii  libpopt0   1.10-3lib for parsing cmdline parameters
ii  libsm6 2:1.0.3-1+b1  X11 Session Management library
ii  libstdc++6 4.3.0~rc2-1   The GNU Standard C++ Library v3
ii  libx11-6   2:1.0.3-7 X11 client-side library
ii  libxml22.6.31.dfsg-1 GNOME XML library
ii  libxmu62:1.0.4-1 X11 miscellaneous utility library
ii  libxrender11:0.9.4-1 X Rendering Extension client libra
ii  libxt6 1:1.0.5-3 X11 toolkit intrinsics library
ii  zlib1g 1:1.2.3.3.dfsg-11 compression library - runtime

gchempaint recommends no packages.

-- no debconf information



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Bug#465608: education-chemistry: fails to install: err 67: Custom distribution education does not exist

2008-02-13 Thread Johannes Ranke
Package: education-chemistry
Version: 0.824+svn40294
Severity: grave
Justification: renders package unusable


Setting up education-chemistry (0.824+svn40294) ...
err 67: Custom distribution education does not exist
dpkg: error processing education-chemistry (--configure):
 subprocess post-installation script returned error exit status 67
Errors were encountered while processing:
 education-chemistry
E: Sub-process /usr/bin/dpkg returned an error code (1)


-- System Information:
Debian Release: lenny/sid
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.23-1-amd64 (SMP w/1 CPU core)
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash

Versions of packages education-chemistry depends on:
ii  education-tasks   0.824+svn40294 Debian Edu tasks for tasksel

Versions of packages education-chemistry recommends:
ii  chemtool  1.6.10-1   Chemical structures drawing progra
ii  easychem  0.6-4  Draw high-quality molecules and 2D
ii  gchempaint0.8.6-12D chemical structures editor for 
ii  gdis  0.89-2 molecular display
ii  ghemical  2.95-2 A GNOME molecular modelling enviro
ii  gperiodic 2.0.10-2   periodic table application
ii  kalzium   4:3.5.8-1  chemistry teaching tool for KDE
ii  pymol 1.0r2-1An OpenGL Molecular Graphics Syste
ii  viewmol   2.4.1-12   A graphical front end for computat
ii  xdrawchem 1.9.9-4+b1 Chemical structures and reactions 

-- no debconf information



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Bug#456938: openoffice.org-java-common: fails to upgrade

2007-12-18 Thread Johannes Ranke
Package: openoffice.org-java-common
Version: 2.2.1-9~bpo40+1
Severity: grave
Justification: renders package unusable

On upgrade I get:

Preparing to replace openoffice.org-java-common 2.2.1-9~bpo40+1 (using
.../openoffice.org-java-common_1%3a2.3.1-2~bpo40+1_all.deb) ...
Unpacking replacement openoffice.org-java-common ...
dpkg: error processing
/var/cache/apt/archives/openoffice.org-java-common_1%3a2.3.1-2~bpo40+1_all.deb
(--unpack):
 trying to overwrite `/usr/lib/openoffice/program/classes/hsqldb.jar',
which is also in package openoffice.org-base
Errors were encountered while processing:
 /var/cache/apt/archives/openoffice.org-java-common_1%3a2.3.1-2~bpo40+1_all.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)


-- System Information:
Debian Release: 4.0
  APT prefers stable
  APT policy: (500, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Shell:  /bin/sh linked to /bin/bash
Kernel: Linux 2.6.18-3-xen-amd64
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)

Versions of packages openoffice.org-java-common depends on:
ii  bsh2.0b4-4   Java scripting environment (BeanSh
ii  libxalan2-java 2.7.0-1   XSL Transformations (XSLT) process
ii  libxerces2-java2.8.1-1   Validating XML parser for Java wit
ii  openoffice.org-common  1:2.3.1-2~bpo40+1 OpenOffice.org office suite archit

openoffice.org-java-common recommends no packages.

-- no debconf information

-- 
Dr. Johannes Ranke [EMAIL PROTECTED] Key ID: F649AF90
UFT Bremen, Leobenerstr. 1 +49 421 218 63373
D-28359 Bremen http://www.uft.uni-bremen.de/chemie/ranke



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Bug#421705: r-cran-codetools: doesn't contain codetools library

2007-05-01 Thread Johannes Ranke
* Dirk Eddelbuettel <[EMAIL PROTECTED]> [070501 13:50]:
> 
> Hi Johannes,
> 
> On 1 May 2007 at 09:13, Johannes Ranke wrote:
> | Package: r-cran-codetools
> | Version: 0.1-8-1
> | Severity: grave
> | Justification: renders package unusable
> | 
> | 
> | Hi Dirk,
> | 
> | sorry to pollute your nice and clean BTS pages, but you obviously built
> | the r-cran-codetools from the rcompgen source package, and therefore
> 
> I actually noticed that and made two more uploads (see 
> http://packages.qa.debian.org/c/codetools.html -- which actually indicates
> that it got pulled) but I uploaded it with lower version numbers -- so the
> old package "won", unfortunately.

Oh, the version number was from rcompgen, too, I see.
 
> I'll clean that up, either with a new package r-cran-codetools or a fix via
> epochs. 

Good to hear that, I'll be glad to do the "backports" just starting out
from your packages then as usual.
 
> Thanks for the heads up.

You're welcome. It's a pleasure to work at the interface of R and
Debian.

Johannes

> 
> Dirk
> 
> | it only contains some files from rcompgen in /usr/share/doc/:
> | 
> | # dpkg --contents /var/cache/apt/archives/r-cran-codetools_0.1-8-1_all.deb 
> | cut -d "." -f 2
> | /
> | /usr/
> | /usr/share/
> | /usr/share/doc/
> | /usr/share/doc/r-cran-codetools/
> | /usr/share/doc/r-cran-codetools/copyright
> | /usr/share/doc/r-cran-codetools/changelog
> | /usr/share/doc/r-cran-codetools/TODO
> | /usr/share/doc/r-cran-codetools/changelog
> | /usr/lib/
> | /usr/lib/R/
> | /usr/lib/R/site-library/
> | 
> | Greets,
> | 
> | Johannes
> | 
> | -- System Information:
> | Debian Release: lenny/sid
> |   APT prefers unstable
> |   APT policy: (500, 'unstable'), (1, 'experimental')
> | Architecture: amd64 (x86_64)
> | 
> | Kernel: Linux 2.6.20-1-amd64 (SMP w/1 CPU core)
> | Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
> | Shell: /bin/sh linked to /bin/bash
> | 
> | Versions of packages r-cran-codetools depends on:
> | ii  r-base-core   2.5.0-1GNU R core of statistical 
> computin
> | 
> | r-cran-codetools recommends no packages.
> | 
> | -- no debconf information
> | 
> 
> -- 
> Hell, there are no rules here - we're trying to accomplish something. 
>   -- Thomas A. Edison

-- 
Dr. Johannes Ranke [EMAIL PROTECTED] Key ID: F649AF90
UFT Bremen, Leobenerstr. 1 +49 421 218 63373
D-28359 Bremen http://www.uft.uni-bremen.de/chemie/ranke


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Bug#421705: r-cran-codetools: doesn't contain codetools library

2007-05-01 Thread Johannes Ranke
Package: r-cran-codetools
Version: 0.1-8-1
Severity: grave
Justification: renders package unusable


Hi Dirk,

sorry to pollute your nice and clean BTS pages, but you obviously built
the r-cran-codetools from the rcompgen source package, and therefore
it only contains some files from rcompgen in /usr/share/doc/:

# dpkg --contents /var/cache/apt/archives/r-cran-codetools_0.1-8-1_all.deb | 
cut -d "." -f 2
/
/usr/
/usr/share/
/usr/share/doc/
/usr/share/doc/r-cran-codetools/
/usr/share/doc/r-cran-codetools/copyright
/usr/share/doc/r-cran-codetools/changelog
/usr/share/doc/r-cran-codetools/TODO
/usr/share/doc/r-cran-codetools/changelog
/usr/lib/
/usr/lib/R/
/usr/lib/R/site-library/

Greets,

Johannes

-- System Information:
Debian Release: lenny/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.20-1-amd64 (SMP w/1 CPU core)
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash

Versions of packages r-cran-codetools depends on:
ii  r-base-core   2.5.0-1GNU R core of statistical computin

r-cran-codetools recommends no packages.

-- no debconf information


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Bug#419987:

2007-04-20 Thread Johannes Ranke
> > The problem is, that if you have xmltex installed, an upgrade
> > from tetex to texlive freezes the system. I think this is worth
> > addressing quickly, since it is very annoying to have to restart the
> > system. As I understood from Norberts comment, fixing xmltex might take
> > a while. 
> 
> No, he wrote about the number of changes, not the time it takes
> (Actually the work is already done by us, just the xmltex maintainer is
> inactive).  

OK.
 
> It wasn't clear to me that you were talking about an interim solution.

Sorry, I should have made that clear.

Thanks for all the great work on maintaining tex for Debian!

Regards,

Johannes
 
> Regards, Frank
> 
> -- 
> Dr. Frank Küster
> Single Molecule Spectroscopy, Protein Folding @ Inst. f. Biochemie, Univ. 
> Zürich
> Debian Developer (teTeX/TeXLive)

-- 
Dr. Johannes Ranke [EMAIL PROTECTED] Key ID: F649AF90
UFT Bremen, Leobenerstr. 1 +49 421 218 8971
D-28359 Bremen http://www.uft.uni-bremen.de/chemie/ranke



Bug#419987:

2007-04-20 Thread Johannes Ranke
* Frank Küster <[EMAIL PROTECTED]> [070420 10:30]:
> Johannes Ranke <[EMAIL PROTECTED]> wrote:
> 
> > * Frank Küster <[EMAIL PROTECTED]> [070420 09:20]:
> >> Johannes Ranke <[EMAIL PROTECTED]> wrote:
> >> 
> >> > Couldn't texlive-base-bin conflict with xmltex?
> >> 
> >> Of course not, since that would mean that xmltex isn't installable any
> >> more - there's no other TeX system in sid.
> >
> > Citing from the xmltex package:
> > "XMLTeX is a non-validating, namespace-aware XML parser written in TeX.
> > It allows TeX to directly process XML files."
> >
> > Usually I process tex files with TeX, not XML files. So I figured I
> > don't need xmltex. Did I miss something, like texlive converts every
> > tex/latex file into XML and then uses xmltex?
> 
> No, why?  What's the problem you are trying to address?  

See bug title.

> Was xmltex
> pulled in by some package which you installed?  

I don't remember this.

> Usually, people who
> don't want xmltex shouldn't install it, but for those who install it on
> purpose, it also needs a working TeX system "underneath".

The problem is, that if you have xmltex installed, an upgrade
from tetex to texlive freezes the system. I think this is worth
addressing quickly, since it is very annoying to have to restart the
system. As I understood from Norberts comment, fixing xmltex might take
a while. So, at present, it would be nice if tex-live-bin would conflict
with xmltex, because it is impossible, as far as I can see, to have both
on the system. Later, of course, this conflict should be removed.

Johannes


> 
> Regards, Frank
> -- 
> Dr. Frank Küster
> Single Molecule Spectroscopy, Protein Folding @ Inst. f. Biochemie, Univ. 
> Zürich
> Debian Developer (teTeX/TeXLive)

-- 
Dr. Johannes Ranke [EMAIL PROTECTED] Key ID: F649AF90
UFT Bremen, Leobenerstr. 1 +49 421 218 8971
D-28359 Bremen http://www.uft.uni-bremen.de/chemie/ranke



Bug#419987:

2007-04-20 Thread Johannes Ranke
* Frank Küster <[EMAIL PROTECTED]> [070420 09:20]:
> Johannes Ranke <[EMAIL PROTECTED]> wrote:
> 
> > Couldn't texlive-base-bin conflict with xmltex?
> 
> Of course not, since that would mean that xmltex isn't installable any
> more - there's no other TeX system in sid.

Citing from the xmltex package:
"XMLTeX is a non-validating, namespace-aware XML parser written in TeX.
It allows TeX to directly process XML files."

Usually I process tex files with TeX, not XML files. So I figured I
don't need xmltex. Did I miss something, like texlive converts every
tex/latex file into XML and then uses xmltex?



Bug#419987:

2007-04-19 Thread Johannes Ranke
retitle 419987 texlive-base-bin: 
=?iso-8859-15?q?configuration_runs_forever=2C_leaks_memory_until_system_d?=
 =?iso-8859-15?q?ies=0D=0Athanks?=
Reply-To: Johannes Ranke <[EMAIL PROTECTED]>
Message-ID: <[EMAIL PROTECTED]>
X-Mailer: reportbug 3.36
Date: Thu, 19 Apr 2007 23:16:58 +0200

Package: texlive-base-bin
Version: 2007-5
Followup-For: Bug #419987

Just trying to change the bug title, so people using apt-listbugs get a
clue. No idea if this works like that.

Couldn't texlive-base-bin conflict with xmltex?

-- System Information:
Debian Release: lenny/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.20-1-amd64 (SMP w/1 CPU core)
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash

Versions of packages texlive-base-bin depends on:
ii  ed0.2-20 The classic unix line editor
ii  libc6 2.5-3  GNU C Library: Shared libraries
ii  libncurses5   5.5-5  Shared libraries for terminal hand
ii  libpng12-01.2.15~beta5-1 PNG library - runtime
ii  libpoppler0c2 0.4.5-5.1  PDF rendering library
ii  libx11-6  2:1.0.3-7  X11 client-side library
ii  libxaw7   1:1.0.3-3  X11 Athena Widget library
ii  libxmu6   1:1.0.3-1  X11 miscellaneous utility library
ii  libxpm4   1:3.5.6-2  X11 pixmap library
ii  libxt61:1.0.5-2  X11 toolkit intrinsics library
ii  mime-support  3.39-1 MIME files 'mime.types' & 'mailcap
ii  perl  5.8.8-7Larry Wall's Practical Extraction 
ii  texlive-common2007-4 TeX Live: Base component
ii  zlib1g1:1.2.3-13 compression library - runtime

Versions of packages texlive-base-bin recommends:
ii  perl-tk  1:804.027-7 Perl module providing the Tk graph

Versions of packages tex-common depends on:
ii  debconf   1.5.13 Debian configuration management sy
ii  ucf   2.0021 Update Configuration File: preserv

Versions of packages texlive-base-bin is related to:
pn  tetex-base (no description available)
ii  tetex-bin 2007-4 TeX Live: teTeX transitional packa
pn  tetex-extra(no description available)

-- debconf information excluded


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