Re: [galaxy-dev] regarding galaxy kickstart
I don't have an answer to your 2. but Galaxy Kickstart sets up Galaxy controlled by supervisord. So you can restart e.g. the Galaxy web front end with: sudo supervisorctl restart galaxy:galaxy_web On Tue, 16 Oct 2018 at 08:16 Rui Wang wrote: > Hi Folks, > > I spent sometime playing with the kickstart, and sort of got it working. > Still a couple things not clear: > > 1. Is it true that there is no start/stop? My guess is that whenever you > need to restart, just re-run the playbook? Anything you want to update(for > example add new tools), you re-run the updated playbook too, correct? > Before you re-run it, do you have to manually kill everything? > > 2. Seems tools could easily added by editing the tool list. How about > genome data? What if I want to add a specific repo or genome data? Is there > a role for this purpose? > > Please give me a hand if you could. Any input will be greatly appreciated. > :-) > > Thanks so much, > Rui > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/
[galaxy-dev] Running Cloudlaunch against a new OpenStack cloud
Hi there I'd like to set up cloudlaunch to be able to set up on-demand Galaxy servers and associated clusters on the new Ilifu OpenStack cloud. From looking around the repositories it looks like Cloudlaunch is at least 2 components: 1. The cloudlaunch server 2. The UI - either cloudlaunch-ui or cloudlaunch-cli I'm trying to get cloudlaunch server installed on a Ubuntu 18.04 VM. The only requirement seems to be python3-pip. For postgresql support I installed the python3-psycopg2 module, the postgresql-10 server and create a user and db (both named cloud). Then I installed the server with `pip3 install cloudlaunch-server` and ran commands: cloudlaunch-server django migrate cloudlaunch-server django createsuperuser cloudlaunch-server django runserver The next step (https://github.com/galaxyproject/cloudlaunch) refers to redis-server. Installing this package seemed to satisfy that requirement, running it manually didn't work so I just ran the celery command as illustrated. And finally relaunched the django server. Then nodejs and npm were installed, the cloudlaunch-ui cloned from github, the various npm package specified installed and finally npm start brings up the cloudlaunch user interface. So far so good but: 1. Is there more extensive documentation anywhere? Specifically documentation about running this in production. 2. Is there a docker container that can be used instead of all this manual installation? 3. How are appliances configured and added to the Appliance Catalogue? Thanks! Peter ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/
