Re: [Ifeffit] VC and V(CO)6 data to share

2022-08-05 Thread Joseph Zsombor-Pindera
Hi there Ismael,

EXAFS of V(CO)6 is quite tricky, as it is volatile and unstable, and
difficult to synthesize. That said, I have been working with it and I do
perform EXAFS, so I could probably get that data. What is your interest in
the EXAFS of V(CO)6?

best,
Joseph



On Tue, Aug 2, 2022 at 12:51 PM Ismael Graff  wrote:

> Dear XAFS enthusiasts,
>
> would anyone have XAFS data of crystalline vanadium carbide (VC) and
> vanadium hexacarbonyl (V(CO)6) to share? In the case of V(CO)6 I´m having
> great trouble of finding any published measurement! I found papers for
> Cr(CO)6, but not V(CO)6. Bibliographical references are also welcome.
>
> All the best, Ismael.
>
>
> --
> 
> *   Ismael Graff   *
> *  *
> * Universidade Federal do Paraná   *
> * Departamento de Física, CP 19044 *
> * 81531-980, Curitiba, Brazil. *
> * Tel (office): +55 41 3361 3093   *
> * Tel (Lab): +55 41 3361 3427  *
> * Fax: +55 41 3361 3418*
> * http://fisica.ufpr.br/graff  *
> *  *
> *  "DOCENDO DISCIMUS"  *
> 
>
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-- 
*Joseph Zsombor-Pindera, BSc*
PhD candidate, chemistry: The University of British Columbia
Visiting Student, chemistry: The University of Calgary
Cell:  514.804.0798
336-B 12th Ave. NW
Calgary AB, T2M 0C7

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Re: [Ifeffit] Download Demeter in Ubuntu 18.04

2019-12-13 Thread Joseph Zsombor-Pindera
do cpan -i Wx #after installing the above packages, it worked.
#install these Perl modules until you can run "perl ./Build.PL" without
complaints

#now install Demeter
./Build
./Build test
#if all the above steps worked then this should run without complaints
sudo ./Build install

#now you should be able to run Demeter programs like
sudo dathena

This procedure got Demeter successfully running on a computer running
Ubuntu 16.04, and I think it should work for 18.04 too, but I would try it
on a fresh install.

I hope this helps :- )
-Joseph

On Wed, Dec 11, 2019 at 10:17 PM sri tapaswi 
wrote:

> Hi all,
>
>   I am using the following link to install Demeter from the source
> code.
> http://bruceravel.github.io/demeter/documents/SinglePage/installation.html
>
>   In step-1, when I do "./configure", it gives an error that says
> "could not find TERMCAP Libraries : 'make' will fail". Through internet
> sources, I found that, I require ncurses5 library because termcap library
> is obsolete for my version of Ubuntu i.e. Ubuntu 18.04 and also found that
> ncurses5 was already installed in my distribution. In this context, please
> guide me on the way forward to solve this problem.
>
> Thanks,
> Sri Tapaswi Nori
>
> On Mon, Dec 9, 2019 at 1:33 PM sri tapaswi 
> wrote:
>
>> Hello all,
>>
>>  Please guide me on the ways to download, install, and run Demeter
>> software such as Athena on linux distribution, Ubuntu 18.04.
>>
>> Thanks,
>> Sri Tapaswi Nori
>>
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-- 
*Joseph Zsombor-Pindera, BSc*
PhD Student, UBC Chemistry

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[Ifeffit] no plot window with Demeter on Ubuntu 18.04

2019-11-19 Thread Joseph Zsombor-Pindera
Dear mailing list members;

I've successfully built Demeter from source on my computer running Ubuntu
18.04. Running "dathena", for example opens the familiar Athena window.
Once I try to plot something, however, I get no plot window. It appears as
if the program has done something, but the window just doesn't appear.

I have installed gnuplot-x11.
running 'gnuplot -e "plot sin(x)"' produces no window, but
'gnuplot -p -e "plot sin(x)"' produces a plot, and if I just run
'plot sin(x)' within gnuplot, then I get the plot, so it appears that
gnuplot itself is working correctly.
'show terminal' results in:
terminal type is wxt 0 enhanced
I have tried changing the terminal to 'wxt' under
preferences>gnuplot>terminal in Athena, which didn't fix the problem.
I have also tried changing the terminal to 'qt' and installing gnuplot-qt.
This didn't work, so I purged it and switched back to gnuplot-x11.
I haven't managed to get gnuplot to run with x11 as its default terminal.
It seems that the default terminal of gnuplot-x11 is wxt.

I'm not sure if these matter, but when I run Athena, I get errors in the
terminal like this:
(dathena:16207): Gtk-CRITICAL **: 11:55:29.414: gtk_box_gadget_distribute:
assertion 'size >= 0' failed in GtkCheckButton

thanks,
Joseph
-- 
*Joseph Zsombor-Pindera, BSc*
PhD Student, UBC Chemistry

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[Ifeffit] trouble installing Demeter from source on Ubuntu 18.04

2019-10-14 Thread Joseph Zsombor-Pindera
Dear mailing list members;

I'm trying to build Demeter from source according to Bruce Ravel's guide
(https://bruceravel.github.io/demeter/documents/SinglePage/installation.html).
I have mostly been able to install the dependencies, but I had trouble with
the libwxgtk packages, so I installed 3.1.0 according to these
instructions:
https://gist.github.com/abdulhalim-cu/f3ae4be0b45baabef5623ccdd20ca584.
wx-config --version results in: 3.1.0, so I think it's installed correctly.
libgif4 is no longer in the repository, so I installed libgif-dev and
libgif7. WxPerl 0.9932 is installed. Iffeffit is installed, and gnuplot-x11
and pgplot5 are installed. I ran ./Build installdeps and it ran but
eventually got stuck in a loop saying "please tell me where I can find your
apache src", which I ignored. The script terminated with "/usr/bin/make
install  -- OK" and then I installed apache2 anyways. Now, if I rerun it,
it outputs "all prerequisites satisfied". I ran perl Build.PL, which seemed
to complete successfully, and then finally ./Build and ./Build test,
however ./Build test fails one test:

Test Summary Report---
t/003_config.t (Wstat: 512 Tests: 22 Failed: 2)
Failed tests: 17, 22
Non-zero exit status: 2
Files=44, Tests=2671, 89 wallclock secs ( 0.34 usr 0.07 sys + 85.03 cusr
3.94 csys = 89.38 CPU)
Result: FAIL
Failed 1/44 test programs. 2/2671 subtests failed.

corresponding to:

#   Failed test 'configuration system introspection works: groups 38
artemis'
#   at t/003_config.t line 66.

#   Failed test 'introspection after reading new group: groups'
#   at t/003_config.t line 80.
# Looks like you failed 2 tests of 22.
t/003_config.t .. Dubious, test returned 2 (wstat 512, 0x200)
Failed 2/22 subtests

line 80 in demeter/t/003_config.t is:
ok( ($#groups == $number_of_groups), 'introspection after reading new
group: groups');

I'm not sure what's going wrong here. Does anyone know how to resolve this
problem?

any help would be much appreciated,
Joseph

-- 
*Joseph Zsombor-Pindera, BSc*
PhD Student, UBC Chemistry
Cell:  514.804.0798
6201 Cecil Green Park Road
Vancouver BC, V6T 1Z1

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