[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|ON_QA |CLOSED Fixed In Version||R-GenomicFeatures-1.6.1-1.f ||c15 Resolution||ERRATA Last Closed||2011-11-28 19:04:35 --- Comment #9 from Fedora Update System upda...@fedoraproject.org 2011-11-28 19:04:35 EST --- R-GenomicFeatures-1.6.1-1.fc15, R-biomaRt-2.10.0-1.fc15, R-rtracklayer-1.14.1-2.fc15, R-RCurl-1.7.0-2.fc15, R-Rcompression-0.93.2-3.fc15, R-affydata-1.11.15-2.fc15, R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc15, R-hgu95av2probe-2.9.0-1.fc15, R-hgu95av2cdf-2.9.1-1.fc15, R-hgu133acdf-2.9.1-1.fc15, R-BSgenome-1.22.0-1.fc15, R-ROC-1.30.0-1.fc15, R-multtest-2.10.0-2.fc15, R-maanova-1.24.0-1.fc15, R-fibroEset-1.4.6-1.fc15, R-Biostrings-2.22.0-1.fc15, R-bigmemory-4.2.11-1.fc15, R-AnnotationDbi-1.16.0-2.fc15, R-affy-1.32.0-1.fc15, R-RM2-0.0-8.fc15, R-GenomicRanges-1.6.2-1.fc15, R-biglm-0.8-1.fc15, R-Biobase-2.14.0-2.fc15, R-XML-3.4.3-2.fc15, R-timeDate-2131.00-1.fc15, R-caTools-1.12-2.fc15, R-BufferedMatrixMethods-1.18.0-1.fc15, R-IRanges-1.12.1-1.fc15, R-tkWidgets-1.32.0-2.fc15, R-RSQLite-0.10.0-1.fc15, R-msm-1.1-1.fc15, R-lmtest-0.9.29-1.fc15, R-xtable-1.6.0-1.fc15, R-wavethresh-4.5-2.fc15, R-waveslim-1.6.4-2.fc15, R-statmod-1.4.13-1.fc15, R-sciplot-1.0.9-1.fc15, R-Rsolid-0.9.31-5.fc15, R-RScaLAPACK-0.6.1-8.fc15, scalapack-1.7.5-14.fc15, R-rlecuyer-0.3.1-3.fc15, R-qvalue-1.28.0-1.fc15, R-hdf5-1.6.9-13.fc15, R-GeneR-2.24.0-2.fc15, R-combinat-0.0.8-1.fc15, R-BufferedMatrix-1.18.0-2.fc15, R-bitops-1.0.4.1-6.fc15, R-widgetTools-1.32.0-2.fc15, R-DynDoc-1.32.0-2.fc15, R-preprocessCore-1.16.0-2.fc15, R-RUnit-0.4.26-3.fc15, R-affyio-1.22.0-1.fc15, R-acepack-1.3.3.0-1.fc15, R-abind-1.3.0-1.fc15, R-RODBC-1.3.3-1.fc15, R-qtl-1.21.2-2.fc15, R-nws-1.7.0.1-3.fc15, R-mvtnorm-0.9.9991-1.fc15, R-zoo-1.7.6-2.fc15, R-DBI-0.2.5-3.fc15, rpy-2.2.4-1.fc15, rkward-0.5.7-2.fc15.1, graphviz-2.26.3-6.fc15, R-2.14.0-3.fc15 has been pushed to the Fedora 15 stable repository. If problems still persist, please make note of it in this bug report. -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Fixed In Version|R-GenomicFeatures-1.6.1-1.f |R-GenomicFeatures-1.6.1-1.f |c15 |c16 --- Comment #10 from Fedora Update System upda...@fedoraproject.org 2011-11-28 19:13:35 EST --- R-GenomicFeatures-1.6.1-1.fc16, R-biomaRt-2.10.0-1.fc16, R-rtracklayer-1.14.1-2.fc16, R-RCurl-1.7.0-2.fc16, R-Rcompression-0.93.2-3.fc16, R-affydata-1.11.15-2.fc16, R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc16, R-hgu95av2probe-2.9.0-1.fc16, R-hgu95av2cdf-2.9.1-1.fc16, R-hgu133acdf-2.9.1-1.fc16, R-BSgenome-1.22.0-1.fc16, R-ROC-1.30.0-1.fc16, R-multtest-2.10.0-2.fc16, R-maanova-1.24.0-1.fc16, R-fibroEset-1.4.6-1.fc16, R-Biostrings-2.22.0-1.fc16, R-bigmemory-4.2.11-1.fc16, R-AnnotationDbi-1.16.0-2.fc16, R-affy-1.32.0-1.fc16, R-RM2-0.0-8.fc16, R-GenomicRanges-1.6.2-1.fc16, R-biglm-0.8-1.fc16, R-Biobase-2.14.0-2.fc16, R-XML-3.4.3-2.fc16, R-timeDate-2131.00-1.fc16, R-caTools-1.12-2.fc16, R-BufferedMatrixMethods-1.18.0-1.fc16, R-IRanges-1.12.1-1.fc16, R-tkWidgets-1.32.0-2.fc16, R-RSQLite-0.10.0-1.fc16, R-msm-1.1-1.fc16, R-lmtest-0.9.29-1.fc16, R-xtable-1.6.0-1.fc16, R-wavethresh-4.5-2.fc16, R-waveslim-1.6.4-2.fc16, R-statmod-1.4.13-1.fc16, R-sciplot-1.0.9-1.fc16, R-Rsolid-0.9.31-5.fc16, R-RScaLAPACK-0.6.1-8.fc16, scalapack-1.7.5-14.fc16, R-rlecuyer-0.3.1-3.fc16, R-qvalue-1.28.0-1.fc16, R-hdf5-1.6.9-13.fc16, R-GeneR-2.24.0-2.fc16, R-combinat-0.0.8-1.fc16, R-BufferedMatrix-1.18.0-2.fc16, R-bitops-1.0.4.1-6.fc16, R-widgetTools-1.32.0-2.fc16, R-DynDoc-1.32.0-2.fc16, R-preprocessCore-1.16.0-2.fc16, R-RUnit-0.4.26-3.fc16, R-affyio-1.22.0-1.fc16, R-acepack-1.3.3.0-1.fc16, R-abind-1.3.0-1.fc16, R-RODBC-1.3.3-1.fc16, R-qtl-1.21.2-2.fc16, R-nws-1.7.0.1-3.fc16, R-mvtnorm-0.9.9991-1.fc16, R-zoo-1.7.6-2.fc16, R-DBI-0.2.5-3.fc16, rpy-2.2.4-1.fc16, rkward-0.5.7-2.fc16, graphviz-2.28.0-10.fc16, R-2.14.0-3.fc16 has been pushed to the Fedora 16 stable repository. If problems still persist, please make note of it in this bug report. -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|ASSIGNED|MODIFIED -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 --- Comment #6 from Fedora Update System upda...@fedoraproject.org 2011-11-15 11:12:28 EST --- R-GenomicFeatures-1.6.1-1.fc15,R-biomaRt-2.10.0-1.fc15,R-rtracklayer-1.14.1-2.fc15,R-RCurl-1.7.0-2.fc15,R-Rcompression-0.93.2-3.fc15,R-affydata-1.11.15-2.fc15,R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc15,R-hgu95av2probe-2.9.0-1.fc15,R-hgu95av2cdf-2.9.1-1.fc15,R-hgu133acdf-2.9.1-1.fc15,R-BSgenome-1.22.0-1.fc15,R-ROC-1.30.0-1.fc15,R-multtest-2.10.0-2.fc15,R-maanova-1.24.0-1.fc15,R-fibroEset-1.4.6-1.fc15,R-Biostrings-2.22.0-1.fc15,R-bigmemory-4.2.11-1.fc15,R-AnnotationDbi-1.16.0-2.fc15,R-affy-1.32.0-1.fc15,R-RM2-0.0-8.fc15,R-GenomicRanges-1.6.2-1.fc15,R-biglm-0.8-1.fc15,R-Biobase-2.14.0-2.fc15,R-XML-3.4.3-2.fc15,R-timeDate-2131.00-1.fc15,R-caTools-1.12-2.fc15,R-BufferedMatrixMethods-1.18.0-1.fc15,R-IRanges-1.12.1-1.fc15,R-tkWidgets-1.32.0-2.fc15,R-RSQLite-0.10.0-1.fc15,R-msm-1.1-1.fc15,R-lmtest-0.9.29-1.fc15,R-xtable-1.6.0-1.fc15,R-wavethresh-4.5-2.fc15,R-waveslim-1.6.4-2.fc15,R-statmod-1.4.13-1.fc15,R-sciplot-1.0.9-1.fc15,R-Rsolid-0.9.31-5.fc15,R-RScaLAPACK-0.6.1-8.fc15,scalapac! k-1.7.5-14.fc15,R-rlecuyer-0.3.1-3.fc15,R-qvalue-1.28.0-1.fc15,R-hdf5-1.6.9-13.fc15,R-GeneR-2.24.0-2.fc15,R-combinat-0.0.8-1.fc15,R-BufferedMatrix-1.18.0-2.fc15,R-bitops-1.0.4.1-6.fc15,R-widgetTools-1.32.0-2.fc15,R-DynDoc-1.32.0-2.fc15,R-preprocessCore-1.16.0-2.fc15,R-RUnit-0.4.26-3.fc15,R-affyio-1.22.0-1.fc15,R-acepack-1.3.3.0-1.fc15,R-abind-1.3.0-1.fc15,R-RODBC-1.3.3-1.fc15,R-qtl-1.21.2-2.fc15,R-nws-1.7.0.1-3.fc15,R-mvtnorm-0.9.9991-1.fc15,R-zoo-1.7.6-2.fc15,R-DBI-0.2.5-3.fc15,rpy-2.2.4-1.fc15,rkward-0.5.7-2.fc15.1,graphviz-2.26.3-6.fc15,R-2.14.0-3.fc15 has been submitted as an update for Fedora 15. https://admin.fedoraproject.org/updates/R-GenomicFeatures-1.6.1-1.fc15,R-biomaRt-2.10.0-1.fc15,R-rtracklayer-1.14.1-2.fc15,R-RCurl-1.7.0-2.fc15,R-Rcompression-0.93.2-3.fc15,R-affydata-1.11.15-2.fc15,R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc15,R-hgu95av2probe-2.9.0-1.fc15,R-hgu95av2cdf-2.9.1-1.fc15,R-hgu133acdf-2.9.1-1.fc15,R-BSgenome-1.22.0-1.fc15,R-ROC-1.30.0-1.fc15,R-multtest-2.10.0-2.fc15,R-maanova-1.24.0-1.fc15,R-fibroEset-1.4.6-1.fc15,R-Biostrings-2.22.0-1.fc15,R-bigmemory-4.2.11-1.fc15,R-AnnotationDbi-1.16.0-2.fc15,R-affy-1.32.0-1.fc15,R-RM2-0.0-8.fc15,R-GenomicRanges-1.6.2-1.fc15,R-biglm-0.8-1.fc15,R-Biobase-2.14.0-2.fc15,R-XML-3.4.3-2.fc15,R-timeDate-2131.00-1.fc15,R-caTools-1.12-2.fc15,R-BufferedMatrixMethods-1.18.0-1.fc15,R-IRanges-1.12.1-1.fc15,R-tkWidgets-1.32.0-2.fc15,R-RSQLite-0.10.0-1.fc15,R-msm-1.1-1.fc15,R-lmtest-0.9.29-1.fc15,R-xtable-1.6.0-1.fc15,R-wavethresh-4.5-2.fc15,R-waveslim-1.6.4-2.fc15,R-statmod-1.4.13-1.fc15,R-sciplot-1.0.9-1.fc15,R-Rsolid-0.9.31-5! .fc15,R-RScaLAPACK-0.6.1-8.fc15,scalapack-1.7.5-14.fc15,R-rlecuyer-0.3.1-3.fc15,R-qvalue-1.28.0-1.fc15,R-hdf5-1.6.9-13.fc15,R-GeneR-2.24.0-2.fc15,R-combinat-0.0.8-1.fc15,R-BufferedMatrix-1.18.0-2.fc15,R-bitops-1.0.4.1-6.fc15,R-widgetTools-1.32.0-2.fc15,R-DynDoc-1.32.0-2.fc15,R-preprocessCore-1.16.0-2.fc15,R-RUnit-0.4.26-3.fc15,R-affyio-1.22.0-1.fc15,R-acepack-1.3.3.0-1.fc15,R-abind-1.3.0-1.fc15,R-RODBC-1.3.3-1.fc15,R-qtl-1.21.2-2.fc15,R-nws-1.7.0.1-3.fc15,R-mvtnorm-0.9.9991-1.fc15,R-zoo-1.7.6-2.fc15,R-DBI-0.2.5-3.fc15,rpy-2.2.4-1.fc15,rkward-0.5.7-2.fc15.1,graphviz-2.26.3-6.fc15,R-2.14.0-3.fc15 -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 --- Comment #7 from Fedora Update System upda...@fedoraproject.org 2011-11-15 11:13:38 EST --- R-GenomicFeatures-1.6.1-1.fc16,R-biomaRt-2.10.0-1.fc16,R-rtracklayer-1.14.1-2.fc16,R-RCurl-1.7.0-2.fc16,R-Rcompression-0.93.2-3.fc16,R-affydata-1.11.15-2.fc16,R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc16,R-hgu95av2probe-2.9.0-1.fc16,R-hgu95av2cdf-2.9.1-1.fc16,R-hgu133acdf-2.9.1-1.fc16,R-BSgenome-1.22.0-1.fc16,R-ROC-1.30.0-1.fc16,R-multtest-2.10.0-2.fc16,R-maanova-1.24.0-1.fc16,R-fibroEset-1.4.6-1.fc16,R-Biostrings-2.22.0-1.fc16,R-bigmemory-4.2.11-1.fc16,R-AnnotationDbi-1.16.0-2.fc16,R-affy-1.32.0-1.fc16,R-RM2-0.0-8.fc16,R-GenomicRanges-1.6.2-1.fc16,R-biglm-0.8-1.fc16,R-Biobase-2.14.0-2.fc16,R-XML-3.4.3-2.fc16,R-timeDate-2131.00-1.fc16,R-caTools-1.12-2.fc16,R-BufferedMatrixMethods-1.18.0-1.fc16,R-IRanges-1.12.1-1.fc16,R-tkWidgets-1.32.0-2.fc16,R-RSQLite-0.10.0-1.fc16,R-msm-1.1-1.fc16,R-lmtest-0.9.29-1.fc16,R-xtable-1.6.0-1.fc16,R-wavethresh-4.5-2.fc16,R-waveslim-1.6.4-2.fc16,R-statmod-1.4.13-1.fc16,R-sciplot-1.0.9-1.fc16,R-Rsolid-0.9.31-5.fc16,R-RScaLAPACK-0.6.1-8.fc16,scalapac! k-1.7.5-14.fc16,R-rlecuyer-0.3.1-3.fc16,R-qvalue-1.28.0-1.fc16,R-hdf5-1.6.9-13.fc16,R-GeneR-2.24.0-2.fc16,R-combinat-0.0.8-1.fc16,R-BufferedMatrix-1.18.0-2.fc16,R-bitops-1.0.4.1-6.fc16,R-widgetTools-1.32.0-2.fc16,R-DynDoc-1.32.0-2.fc16,R-preprocessCore-1.16.0-2.fc16,R-RUnit-0.4.26-3.fc16,R-affyio-1.22.0-1.fc16,R-acepack-1.3.3.0-1.fc16,R-abind-1.3.0-1.fc16,R-RODBC-1.3.3-1.fc16,R-qtl-1.21.2-2.fc16,R-nws-1.7.0.1-3.fc16,R-mvtnorm-0.9.9991-1.fc16,R-zoo-1.7.6-2.fc16,R-DBI-0.2.5-3.fc16,rpy-2.2.4-1.fc16,rkward-0.5.7-2.fc16,graphviz-2.28.0-10.fc16,R-2.14.0-3.fc16 has been submitted as an update for Fedora 16. https://admin.fedoraproject.org/updates/R-GenomicFeatures-1.6.1-1.fc16,R-biomaRt-2.10.0-1.fc16,R-rtracklayer-1.14.1-2.fc16,R-RCurl-1.7.0-2.fc16,R-Rcompression-0.93.2-3.fc16,R-affydata-1.11.15-2.fc16,R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc16,R-hgu95av2probe-2.9.0-1.fc16,R-hgu95av2cdf-2.9.1-1.fc16,R-hgu133acdf-2.9.1-1.fc16,R-BSgenome-1.22.0-1.fc16,R-ROC-1.30.0-1.fc16,R-multtest-2.10.0-2.fc16,R-maanova-1.24.0-1.fc16,R-fibroEset-1.4.6-1.fc16,R-Biostrings-2.22.0-1.fc16,R-bigmemory-4.2.11-1.fc16,R-AnnotationDbi-1.16.0-2.fc16,R-affy-1.32.0-1.fc16,R-RM2-0.0-8.fc16,R-GenomicRanges-1.6.2-1.fc16,R-biglm-0.8-1.fc16,R-Biobase-2.14.0-2.fc16,R-XML-3.4.3-2.fc16,R-timeDate-2131.00-1.fc16,R-caTools-1.12-2.fc16,R-BufferedMatrixMethods-1.18.0-1.fc16,R-IRanges-1.12.1-1.fc16,R-tkWidgets-1.32.0-2.fc16,R-RSQLite-0.10.0-1.fc16,R-msm-1.1-1.fc16,R-lmtest-0.9.29-1.fc16,R-xtable-1.6.0-1.fc16,R-wavethresh-4.5-2.fc16,R-waveslim-1.6.4-2.fc16,R-statmod-1.4.13-1.fc16,R-sciplot-1.0.9-1.fc16,R-Rsolid-0.9.31-5! .fc16,R-RScaLAPACK-0.6.1-8.fc16,scalapack-1.7.5-14.fc16,R-rlecuyer-0.3.1-3.fc16,R-qvalue-1.28.0-1.fc16,R-hdf5-1.6.9-13.fc16,R-GeneR-2.24.0-2.fc16,R-combinat-0.0.8-1.fc16,R-BufferedMatrix-1.18.0-2.fc16,R-bitops-1.0.4.1-6.fc16,R-widgetTools-1.32.0-2.fc16,R-DynDoc-1.32.0-2.fc16,R-preprocessCore-1.16.0-2.fc16,R-RUnit-0.4.26-3.fc16,R-affyio-1.22.0-1.fc16,R-acepack-1.3.3.0-1.fc16,R-abind-1.3.0-1.fc16,R-RODBC-1.3.3-1.fc16,R-qtl-1.21.2-2.fc16,R-nws-1.7.0.1-3.fc16,R-mvtnorm-0.9.9991-1.fc16,R-zoo-1.7.6-2.fc16,R-DBI-0.2.5-3.fc16,rpy-2.2.4-1.fc16,rkward-0.5.7-2.fc16,graphviz-2.28.0-10.fc16,R-2.14.0-3.fc16 -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Fedora Update System upda...@fedoraproject.org changed: What|Removed |Added Status|MODIFIED|ON_QA --- Comment #8 from Fedora Update System upda...@fedoraproject.org 2011-11-15 19:24:45 EST --- Package R-GenomicFeatures-1.6.1-1.fc16, R-biomaRt-2.10.0-1.fc16, R-rtracklayer-1.14.1-2.fc16, R-RCurl-1.7.0-2.fc16, R-Rcompression-0.93.2-3.fc16, R-affydata-1.11.15-2.fc16, R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc16, R-hgu95av2probe-2.9.0-1.fc16, R-hgu95av2cdf-2.9.1-1.fc16, R-hgu133acdf-2.9.1-1.fc16, R-BSgenome-1.22.0-1.fc16, R-ROC-1.30.0-1.fc16, R-multtest-2.10.0-2.fc16, R-maanova-1.24.0-1.fc16, R-fibroEset-1.4.6-1.fc16, R-Biostrings-2.22.0-1.fc16, R-bigmemory-4.2.11-1.fc16, R-AnnotationDbi-1.16.0-2.fc16, R-affy-1.32.0-1.fc16, R-RM2-0.0-8.fc16, R-GenomicRanges-1.6.2-1.fc16, R-biglm-0.8-1.fc16, R-Biobase-2.14.0-2.fc16, R-XML-3.4.3-2.fc16, R-timeDate-2131.00-1.fc16, R-caTools-1.12-2.fc16, R-BufferedMatrixMethods-1.18.0-1.fc16, R-IRanges-1.12.1-1.fc16, R-tkWidgets-1.32.0-2.fc16, R-RSQLite-0.10.0-1.fc16, R-msm-1.1-1.fc16, R-lmtest-0.9.29-1.fc16, R-xtable-1.6.0-1.fc16, R-wavethresh-4.5-2.fc16, R-waveslim-1.6.4-2.fc16, R-statmod-1.4.13-1.fc16, R-sciplot-1.0.9-1.fc16, R-Rsolid-0.9.31-5.fc16, R-RScaLAPACK-0.6.1-8.fc16, scalapack-1.7.5-14.fc16, R-rlecuyer-0.3.1-3.fc16, R-qvalue-1.28.0-1.fc16, R-hdf5-1.6.9-13.fc16, R-GeneR-2.24.0-2.fc16, R-combinat-0.0.8-1.fc16, R-BufferedMatrix-1.18.0-2.fc16, R-bitops-1.0.4.1-6.fc16, R-widgetTools-1.32.0-2.fc16, R-DynDoc-1.32.0-2.fc16, R-preprocessCore-1.16.0-2.fc16, R-RUnit-0.4.26-3.fc16, R-affyio-1.22.0-1.fc16, R-acepack-1.3.3.0-1.fc16, R-abind-1.3.0-1.fc16, R-RODBC-1.3.3-1.fc16, R-qtl-1.21.2-2.fc16, R-nws-1.7.0.1-3.fc16, R-mvtnorm-0.9.9991-1.fc16, R-zoo-1.7.6-2.fc16, R-DBI-0.2.5-3.fc16, rpy-2.2.4-1.fc16, rkward-0.5.7-2.fc16, graphviz-2.28.0-10.fc16, R-2.14.0-3.fc16: * should fix your issue, * was pushed to the Fedora 16 testing repository, * should be available at your local mirror within two days. Update it with: # su -c 'yum update --enablerepo=updates-testing R-GenomicFeatures-1.6.1-1.fc16 R-biomaRt-2.10.0-1.fc16 R-rtracklayer-1.14.1-2.fc16 R-RCurl-1.7.0-2.fc16 R-Rcompression-0.93.2-3.fc16 R-affydata-1.11.15-2.fc16 R-BSgenome.Celegans.UCSC.ce2-1.3.17-2.fc16 R-hgu95av2probe-2.9.0-1.fc16 R-hgu95av2cdf-2.9.1-1.fc16 R-hgu133acdf-2.9.1-1.fc16 R-BSgenome-1.22.0-1.fc16 R-ROC-1.30.0-1.fc16 R-multtest-2.10.0-2.fc16 R-maanova-1.24.0-1.fc16 R-fibroEset-1.4.6-1.fc16 R-Biostrings-2.22.0-1.fc16 R-bigmemory-4.2.11-1.fc16 R-AnnotationDbi-1.16.0-2.fc16 R-affy-1.32.0-1.fc16 R-RM2-0.0-8.fc16 R-GenomicRanges-1.6.2-1.fc16 R-biglm-0.8-1.fc16 R-Biobase-2.14.0-2.fc16 R-XML-3.4.3-2.fc16 R-timeDate-2131.00-1.fc16 R-caTools-1.12-2.fc16 R-BufferedMatrixMethods-1.18.0-1.fc16 R-IRanges-1.12.1-1.fc16 R-tkWidgets-1.32.0-2.fc16 R-RSQLite-0.10.0-1.fc16 R-msm-1.1-1.fc16 R-lmtest-0.9.29-1.fc16 R-xtable-1.6.0-1.fc16 R-wavethresh-4.5-2.fc16 R-waveslim-1.6.4-2.fc16 R-statmod-1.4.13-1.fc16 R-sciplot-1.0.9-1.fc16 R-Rsolid-0.9.31-5.fc16 R-RScaLAPACK-0.6.1-8.fc16 scalapack-1.7.5-14.fc16 R-rlecuyer-0.3.1-3.fc16 R-qvalue-1.28.0-1.fc16 R-hdf5-1.6.9-13.fc16 R-GeneR-2.24.0-2.fc16 R-combinat-0.0.8-1.fc16 R-BufferedMatrix-1.18.0-2.fc16 R-bitops-1.0.4.1-6.fc16 R-widgetTools-1.32.0-2.fc16 R-DynDoc-1.32.0-2.fc16 R-preprocessCore-1.16.0-2.fc16 R-RUnit-0.4.26-3.fc16 R-affyio-1.22.0-1.fc16 R-acepack-1.3.3.0-1.fc16 R-abind-1.3.0-1.fc16 R-RODBC-1.3.3-1.fc16 R-qtl-1.21.2-2.fc16 R-nws-1.7.0.1-3.fc16 R-mvtnorm-0.9.9991-1.fc16 R-zoo-1.7.6-2.fc16 R-DBI-0.2.5-3.fc16 rpy-2.2.4-1.fc16 rkward-0.5.7-2.fc16 graphviz-2.28.0-10.fc16 R-2.14.0-3.fc16' as soon as you are able to. Please go to the following url: https://admin.fedoraproject.org/updates/FEDORA-2011-15910 then log in and leave karma (feedback). -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 --- Comment #2 from Tom spot Callaway tcall...@redhat.com 2011-11-14 09:34:09 EST --- Jim Kent, the upstream copyright holder for those files, has given permission via email to use/modify/distribute them under the terms of the BSD license. New SPEC: http://spot.fedorapeople.org/R-rtracklayer.spec New SRPM: http://spot.fedorapeople.org/R-rtracklayer-1.14.1-2.fc16.src.rpm -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Pierre-YvesChibon pin...@pingoured.fr changed: What|Removed |Added Flag|fedora-review? |fedora-review+ --- Comment #3 from Pierre-YvesChibon pin...@pingoured.fr 2011-11-14 09:43:21 EST --- Ok this package is then approved. -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Tom spot Callaway tcall...@redhat.com changed: What|Removed |Added Flag||fedora-cvs? --- Comment #4 from Tom spot Callaway tcall...@redhat.com 2011-11-14 10:27:31 EST --- New Package SCM Request === Package Name: R-rtracklayer Short Description: R interface to genome browsers and their annotation tracks Owners: spot Branches: f15 f16 InitialCC: -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 --- Comment #5 from Jon Ciesla l...@jcomserv.net 2011-11-14 10:54:42 EST --- Git done (by process-git-requests). -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. https://bugzilla.redhat.com/show_bug.cgi?id=753188 Pierre-YvesChibon pin...@pingoured.fr changed: What|Removed |Added AssignedTo|nob...@fedoraproject.org|pin...@pingoured.fr -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email --- You are receiving this mail because: --- You are on the CC list for the bug. ___ package-review mailing list package-review@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/package-review
[Bug 753188] Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
Please do not reply directly to this email. All additional
comments should be made in the comments box of this bug.
https://bugzilla.redhat.com/show_bug.cgi?id=753188
Pierre-YvesChibon pin...@pingoured.fr changed:
What|Removed |Added
Status|NEW |ASSIGNED
Flag||fedora-review?
--- Comment #1 from Pierre-YvesChibon pin...@pingoured.fr 2011-11-11 13:47:19
EST ---
The sig.h, portimpl.h, hmmstats.h and cheapcgi.h contain the header:
/*
* Copyright (C) 2000 Jim Kent. This source code may be freely used *
* for personal, academic, and non-profit purposes. Commercial use *
* permitted only by explicit agreement with Jim Kent (jim_k...@pacbell.net) *
*/
I will proceed with the review and we'll see if we can figure this licensing
issue.
Package Review
==
Key:
- = N/A
x = Check
! = Problem
? = Not evaluated
C/C++
[x]: MUST Package does not contain any libtool archives (.la)
[x]: MUST Package does not contains kernel modules.
[x]: MUST Package contains no static executables.
[x]: MUST Rpath absent or only used for internal libs.
[x]: MUST Package is not relocatable.
Generic
[x]: MUST Package is licensed with an open-source compatible license and meets
other legal requirements as defined in the legal section of Packaging
Guidelines.
[x]: MUST Package successfully compiles and builds into binary rpms on at least
one supported architecture.
[x]: MUST All build dependencies are listed in BuildRequires, except for any
that are listed in the exceptions section of Packaging Guidelines.
[x]: MUST Package contains no bundled libraries.
[x]: MUST Changelog in prescribed format.
[x]: MUST Sources contain only permissible code or content.
[x]: MUST Macros in Summary, %description expandable at SRPM build time.
[x]: MUST Package requires other packages for directories it uses.
[x]: MUST Package uses nothing in %doc for runtime.
[x]: MUST Package is not known to require ExcludeArch.
[x]: MUST Permissions on files are set properly.
[x]: MUST Package does not contain duplicates in %files.
[x]: MUST Spec file lacks Packager, Vendor, PreReq tags.
[-]: MUST If (and only if) the source package includes the text of the
license(s) in its own file, then that file, containing the text of the
license(s) for the package is included in %doc.
[x]: MUST License field in the package spec file matches the actual license.
[x]: MUST Package consistently uses macros (instead of hard-coded directory
names).
[x]: MUST Package meets the Packaging Guidelines.
[x]: MUST Package is named according to the Package Naming Guidelines.
[x]: MUST Package does not generates any conflict.
[x]: MUST Package obeys FHS, except libexecdir and /usr/target.
[x]: MUST Package must own all directories that it creates.
[x]: MUST Package does not own files or directories owned by other packages.
[x]: MUST Package installs properly.
[x]: MUST Requires correct, justified where necessary.
[x]: MUST Rpmlint output is silent.
[x]: MUST Sources used to build the package matches the upstream source, as
provided in the spec URL.
MD5SUM this package : 130af70245801e131b0ebbda8fd83fde
MD5SUM upstream package : 130af70245801e131b0ebbda8fd83fde
[x]: MUST Spec file is legible and written in American English.
[x]: MUST Spec file name must match the spec package %{name}, in the format
%{name}.spec.
[x]: MUST Package contains a SysV-style init script if in need of one.
[x]: MUST File names are valid UTF-8.
[x]: SHOULD Reviewer should test that the package builds in mock.
[-]: SHOULD If the source package does not include license text(s) as a
separate file from upstream, the packager SHOULD query upstream to include it.
[x]: SHOULD Dist tag is present.
[x]: SHOULD No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: SHOULD Final provides and requires are sane (rpm -q --provides and rpm -q
--requires).
[x]: SHOULD Package functions as described.
[-]: SHOULD Package does not include license text files separate from upstream.
[x]: SHOULD SourceX is a working URL.
[-]: SHOULD Description and summary sections in the package spec file contains
translations for supported Non-English languages, if available.
[-]: SHOULD Package should compile and build into binary rpms on all supported
architectures.
Checked on x86_64
[-]: SHOULD %check is present and all tests pass.
[x]: SHOULD Packages should try to preserve timestamps of original installed
files.
[x]: SHOULD Spec use %global instead of %define.
R
[x]: MUST Package contains the mandatory BuildRequires.
[x]: MUST The package has the standard %build section.
[x]: MUST The package
