[R] warning messages in grid or lattice give that I can't debug
The messages are visible in 2.6.0dev The same commands in 2.4.1 work without warning messages. I am using the HH_1.18-1 from R_2.4.1 with both R versions and not the current HH_2.1-3 version$version.string installed.packages()[c(grid,lattice, HH),3] ## library(HH) library(lattice, lib.loc=C:/PROGRA~1/R/R-2.4.1/library) hotdog - read.table(hh(datasets/hotdog.dat), header=TRUE) ancova(Sodium ~ Calories + Type, data=hotdog) the messages in R_2.6.0dev are Warning messages: 1: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character ... 6: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character My guess is that these warnings are a response to a change in grid or lattice in 2.5.0. I attempted to trace these with options(warn=2) options(error=recover) without success. Debugging suggestions or revised programming suggestions would be appreciated. Rich __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] warning messages in grid or lattice give that I can't debug
Richard M. Heiberger wrote: The messages are visible in 2.6.0dev The same commands in 2.4.1 work without warning messages. I am using the HH_1.18-1 from R_2.4.1 with both R versions and not the current HH_2.1-3 version$version.string installed.packages()[c(grid,lattice, HH),3] ## library(HH) library(lattice, lib.loc=C:/PROGRA~1/R/R-2.4.1/library) It is essential not to use a lattice version designed for R-2.4.1 with R-devel... And I don't see a reason, and in some cases, switching to another major version of R requires recompiling of packages anyway. Uwe Ligges hotdog - read.table(hh(datasets/hotdog.dat), header=TRUE) ancova(Sodium ~ Calories + Type, data=hotdog) the messages in R_2.6.0dev are Warning messages: 1: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character ... 6: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character My guess is that these warnings are a response to a change in grid or lattice in 2.5.0. I attempted to trace these with options(warn=2) options(error=recover) without success. Debugging suggestions or revised programming suggestions would be appreciated. Rich __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] warning messages in grid or lattice give that I can't debug
Uwe Ligges wrote: It is essential not to use a lattice version designed for R-2.4.1 with R-devel... And I don't see a reason, and in some cases, switching to another major version of R requires recompiling of packages anyway. The warnings first appeared in 2.6.0dev when I recompiled my package for 2.6.0dev. The warnings are not detected by R CMD CHECK and still appear in HH_2.1-3 (not yet on CRAN) after I repaired everything the R CMD CHECK does find. I backed up to the 2.4.1 compilation of HH along with the complete 2.6.0dev environment, including lattice and grid, to confirm that I had not introduced new errors. I believe the warnings come from a change made to R, probably in lattice or grid, that are not detected by R CMD CHECK. Uwe is correct that the older lattice and grid will not load with the newer R. Rich __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] warning messages in grid or lattice give that I can't debug
On 8/2/07, Richard M. Heiberger [EMAIL PROTECTED] wrote: The messages are visible in 2.6.0dev The same commands in 2.4.1 work without warning messages. I am using the HH_1.18-1 from R_2.4.1 with both R versions and not the current HH_2.1-3 version$version.string installed.packages()[c(grid,lattice, HH),3] ## library(HH) library(lattice, lib.loc=C:/PROGRA~1/R/R-2.4.1/library) hotdog - read.table(hh(datasets/hotdog.dat), header=TRUE) ancova(Sodium ~ Calories + Type, data=hotdog) the messages in R_2.6.0dev are Warning messages: 1: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character ... 6: In grid.Call.graphics(L_points, x$x, x$y, x$pch, x$size) : supplied color is not numeric nor character My guess is that these warnings are a response to a change in grid or lattice in 2.5.0. I attempted to trace these with options(warn=2) options(error=recover) without success. Debugging suggestions or revised programming suggestions would be appreciated. Well, options(warn=2) traces the problem to the legend drawing code, and going from there, I get str(trellis.last.object()$legend$right$args$key$points) 'data.frame': 3 obs. of 6 variables: $ alpha: num 1 1 1 $ cex : num 0.8 0.8 0.8 $ col : chr #0080ff #ff00ff darkgreen $ font : num 1 1 1 $ pch : num 1 1 1 $ fill : Factor w/ 1 level transparent: 1 1 1 Note that the last component 'fill' is a factor (which is not numeric nor character, at least in a zen kind of way). I presume you are somehow protecting 'col' from becoming a factor, and that does not translate to 'fill'. This behaviour (of HH) is not new, and I believe you will see the same output as above in R 2.4. What's new is that 'fill' used to be ignored by draw.key(), which was a bug in lattice that has now been fixed. -Deepayan __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] warning messages in grid or lattice give that I can't debug
Thanks Deepayan. Does that translate that I don't have to do anything else, and that I can submit the package in its present state to CRAN? Rich __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] warning messages in grid or lattice give that I can't debug
On 8/2/07, Richard M. Heiberger [EMAIL PROTECTED] wrote: Thanks Deepayan. Does that translate that I don't have to do anything else, and that I can submit the package in its present state to CRAN? No, you have to make sure that 'fill' is not a factor. My guess is that the simplest way to do that would be to not make key$points a data.frame, but I haven't actually looked at what your code is doing. -Deepayan __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
