[sage-release] Re: Sage 9.5.beta7 released

[Sébastien Labbé]

Again, running

./sage -t -p --all --long --optional=sage,optional,external,build 
--show-skipped

stops at findstat.py. Also src/sage/combinat/designs/ext_rep.py seems to 
again be among the tests that are killed:

0: Mp00061oMp00069 (quality [100])
Got:
0: Mp00061oMp00069 (quality [97])
**
File "src/sage/databases/findstat.py", line 1236, in 
sage.databases.findstat.findmap
Failed example:
p = findmap({pi: pi.complement().increasing_tree_shape() for pi in l}, 
depth=2); p# optional -- internet
Expected:
0: Mp00061oMp00069 (quality [100])
Got:
0: Mp00061oMp00069 (quality [97])
Killing test src/sage/databases/findstat.py
Killing test src/sage/combinat/designs/ext_rep.py
Killing test src/sage/numerical/backends/generic_backend.pyx
Killing test src/sage/combinat/words/word_infinite_datatypes.py
Killing test src/sage/combinat/baxter_permutations.py
Killing test src/sage/rings/polynomial/polynomial_complex_arb.pyx
Killing test src/sage/topology/simplicial_complex_catalog.py
--
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/tests/cmdline.py  # 10 doctests failed
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/graphs/generic_graph.py  # 2 doctests failed
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/interfaces/fricas.py  # 1 doctest failed
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/graphs/graph.py  # 2 doctests failed
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/sat/solvers/dimacs.py  # 2 doctests failed
sage -t --long --random-seed=50431416943257225489127275634010530880 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
Doctests interrupted: 1658/4397 files tested
--
Total time for all tests: 2605.3 seconds
cpu time: 16433.5 seconds
cumulative wall time: 20302.4 seconds

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[sage-release] Re: Sage 9.5.beta7 released

[Sébastien Labbé]

On Ubuntu 18.04, running tests with many optional and external packages, 
the tests stops at some point and among the files that are killed at this 
point are findstat.py and doctest/external.py. More precisely,

Using 
--optional=4ti2,build,ccache,cryptominisat,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,lidia,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage.geometry.polyhedron,sage.rings.real_double,sage_numerical_backends_coin,sage_spkg
External software to be detected: 
4ti2,cplex,dvipng,ffmpeg,graphviz,gurobi,imagemagick,internet,latex,lualatex,macaulay2,magma,maple,mathematica,matlab,octave,pandoc,pdf2svg,pdflatex,rubiks,scilab,xelatex

finishes with:

**
File "src/sage/databases/findstat.py", line 1231, in 
sage.databases.findstat.findmap
Failed example:
q = findmap([(pi, pi.complement().increasing_tree_shape()) for pi in 
l], depth=2); q  # optional -- internet
Expected:
0: Mp00061oMp00069 (quality [100])
Got:
0: Mp00061oMp00069 (quality [97])
**
File "src/sage/databases/findstat.py", line 1236, in 
sage.databases.findstat.findmap
Failed example:
p = findmap({pi: pi.complement().increasing_tree_shape() for pi in l}, 
depth=2); p# optional -- internet
Expected:
0: Mp00061oMp00069 (quality [100])
Got:
0: Mp00061oMp00069 (quality [97])
Killing test src/sage/databases/findstat.py
Killing test src/sage/combinat/designs/ext_rep.py
Killing test src/sage/doctest/external.py
Killing test src/doc/en/constructions/number_theory.rst
Killing test src/sage/interfaces/jmoldata.py
Killing test src/doc/ja/tutorial/tour_polynomial.rst
Killing test src/sage/combinat/root_system/type_C.py
--
--
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/graphs/generic_graph.py  # 2 doctests failed
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/graphs/graph.py  # 2 doctests failed
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/interfaces/fricas.py  # 1 doctest failed
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/sat/solvers/dimacs.py  # 2 doctests failed
sage -t --long --random-seed=114684091447841116365620770388766582718 
src/sage/tests/cmdline.py  # 10 doctests failed
Doctests interrupted: 1676/4397 files tested
--

The above failures are already listed at 
https://trac.sagemath.org/ticket/25536

I will re-run the tests hoping they will finish this time.


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[sage-release] Re: Sage 9.5.beta7 released

[Steven Trogdon]

I have provided a solution to the jobserver warnings 
at https://trac.sagemath.org/ticket/32928

On Saturday, November 20, 2021 at 7:56:05 PM UTC-7 Steven Trogdon wrote:

> Perhaps not directly related to this release but I have numerous jobserver 
> warnings when building the pdf documentation :
>
> make[5]: warning: jobserver unavailable: using -j1.  Add '+' to parent 
> make rule.
>
> that seems to mostly occur when changing folders to run the LaTeX Makefile
>
> [reference] The LaTeX files are in 
> local/share/doc/sage/latex/en/reference/references.
> [reference] Run 'make' in that directory to run these through (pdf)latex
> [reference] (use `make latexpdf' here to do that automatically).
> LaTeX file written to 
> /local/sage-git/sage/local/share/doc/sage/latex/en/reference/references
> make[5]: warning: jobserver unavailable: using -j1.  Add '+' to parent 
> make rule.
> latexmk -pdf -dvi- -ps-  'references.tex'
>
> I believe the jobserver warning occurs when recursive 'makes' are not 
> being handled properly. Should this be addressed?
> On Saturday, November 20, 2021 at 3:25:09 AM UTC-7 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>> cc60cfebc4 (tag: 9.5.beta7, trac/develop) Updated SageMath version to 
>> 9.5.beta7
>> cdb3614b34 Trac #32858: tiny doctest formatting fix in integer_mod_ring.py
>> b122005655 Trac #32791: Human Readable Error-Message for Elliptic curve 
>> constructor.
>> 40b1190a59 Trac #32320: Ideal() with fraction-field elements is a small 
>> footgun
>> e19fc456be Trac #32875: fix Krull dimension of zero univariate quotient 
>> ring
>> 7a358f2e9e Trac #32872: some details in plot
>> b3c05505e6 Trac #32863: fix E713 and E714 in coding
>> a95cfc54db Trac #32696: 1 internet doctest failing in 
>> src/sage/finance/stock.py
>> c87b264772 Trac #27744: Make pynormaliz a Feature
>> 8b54c36d5e Trac #32859: Wrong display from type() with %display latex
>> 76a8d311d5 Trac #32405: sage-bootstrap-python: Prefer pythons that 
>> support ssl with SNI
>> 05aa11f3f7 Trac #32850: random doctest failure in 
>> tests/books/computational-mathematics-with-sagemath/sol/linsolve_doctest.py
>> ad620c4e4b Trac #32819: Determinant for multi-component links
>> b686ceb88c Trac #32816: random doctest failure in 
>> rings/polynomial/polynomial_element_generic.py
>> 6dab8f4668 Trac #32715: flit_core: Use sdh_pip_install --no-deps
>> f46a88e77d Trac #32713: Apply "configure --enable-editable" also to other 
>> sage distribution packages
>> f69aa7bd6b Trac #32689: AG code construction: a place given as input gets 
>> converted to a prime divisor
>> 28d573549c Trac #32380: make NumberFieldFractionalIdeal inherit from 
>> Ideal_fractional
>> 402efc30a9 Trac #32871: CBF(f(i)) loops for a builtin function f with no 
>> corresponding method
>> 311fd3481e Trac #32869: fix improper names of several special functions 
>> for CBF
>> ec03b51b74 Trac #32864: fix E713 and E714 in graphs
>> 69a4cc6a68 Trac #32861: Add memory_allocator/distros/conda.txt
>> effa97500f Trac #32857: src/requirements.txt: Add memory_allocator
>> 1114cde255 Trac #32851: Provide real ball erfi, Ei, Si, Ci, Shi, Chi, li, 
>> Li, beta, gamma_inc, gamma_inc_lower via arb
>> a95252313a Trac #32815: Update numpy to 1.21.4, networkx to 2.6.3
>> 44a35355cc Trac #32778: sage.rings.infinity: Remove hard dependency on 
>> real_lazy and real_mpfi
>> f560fdc2df Trac #32733: Remove more .all imports
>> ac64d4f4f2 Trac #32208: Jupyter notebook receives invalid LaTeX output 
>> via MathJax
>> aa66d526cf Trac #16567: Use libsingular for polynomial rings over 
>> function fields
>> 45515aface Trac #32848: various code details in combinat
>> a5c797bdd5 Trac #32844: fix some details in sloane_functions
>> befd4a21ba Trac #32842: use PARI's fflog() for binary finite fields
>> 69d8b99468 Trac #32840: Fix unpickle_global when 
>> register_unpickle_override appears in a module not loaded at startup
>> 033bbb02d6 Trac #32838: tox.ini: Add gentoo-python3.10
>> 2de30a8587 Trac #32833: use libgap in coding
>> 85b46be3de Trac #32831: Failure with specific random seed in sandpile.py
>> 9d5d4efd54 Trac #32830: fix category of subgroups of finite matrix groups
>> d8affa1b28 Trac #32829: fix eps_monom function in RightQuantumWord
>> e47173be0a Trac #32824: Bug computing kernel of ring homomorphism GCA
>> 2ad6448169 Trac #32823: fix E713 and E714 in interfaces
>> 548c83d9ac Trac #32822: fix E713 and E714 in dynamics
>> 7ddaf7ad7c Trac #32821: fix E713 and E714 in geometry
>> e5da507620 Trac #32813: improved error message 'unknown file extension' 
>> provided by sage -t
>> a6019fbe40 Trac #32812: remove the "bound method" py2/py3 adapter in 
>> doctest parsing
>> a99f383bb6 Trac #32807: cleanup various details in combinat
>> 95fd5dfa38 Trac #32796: update GMP to version 6.2.1
>> d4ecc2a5e1 Trac #32795: docbuild fails

Re: [sage-release] Re: Sage 9.5.beta7 released

[Henri Girard]

For a few months i couldn't compile sage but today from a fresh ubuntu 
20.04, it succeded, from a rizen 16 cors and 16 Go RAM


Henri

Le 22/11/2021 à 13:16, Eric Gourgoulhon a écrit :

On Ubuntu 20.04 running on Xeon E5-2623 + 16 GB RAM:
- incremental build (-j16) from 9.5.beta6, with system python (3.8.10): OK
- make ptestlong --> "All tests passed!"

Eric.

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[sage-release] Re: Sage 9.5.beta7 released

[Eric Gourgoulhon]

On Ubuntu 20.04 running on Xeon E5-2623 + 16 GB RAM:
- incremental build (-j16) from 9.5.beta6, with system python (3.8.10): OK
- make ptestlong --> "All tests passed!"

Eric.

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[sage-release] Re: Sage 9.5.beta7 released

[Steven Trogdon]

Perhaps not directly related to this release but I have numerous jobserver 
warnings when building the pdf documentation :

make[5]: warning: jobserver unavailable: using -j1.  Add '+' to parent make 
rule.

that seems to mostly occur when changing folders to run the LaTeX Makefile

[reference] The LaTeX files are in 
local/share/doc/sage/latex/en/reference/references.
[reference] Run 'make' in that directory to run these through (pdf)latex
[reference] (use `make latexpdf' here to do that automatically).
LaTeX file written to 
/local/sage-git/sage/local/share/doc/sage/latex/en/reference/references
make[5]: warning: jobserver unavailable: using -j1.  Add '+' to parent make 
rule.
latexmk -pdf -dvi- -ps-  'references.tex'

I believe the jobserver warning occurs when recursive 'makes' are not being 
handled properly. Should this be addressed?
On Saturday, November 20, 2021 at 3:25:09 AM UTC-7 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> cc60cfebc4 (tag: 9.5.beta7, trac/develop) Updated SageMath version to 
> 9.5.beta7
> cdb3614b34 Trac #32858: tiny doctest formatting fix in integer_mod_ring.py
> b122005655 Trac #32791: Human Readable Error-Message for Elliptic curve 
> constructor.
> 40b1190a59 Trac #32320: Ideal() with fraction-field elements is a small 
> footgun
> e19fc456be Trac #32875: fix Krull dimension of zero univariate quotient 
> ring
> 7a358f2e9e Trac #32872: some details in plot
> b3c05505e6 Trac #32863: fix E713 and E714 in coding
> a95cfc54db Trac #32696: 1 internet doctest failing in 
> src/sage/finance/stock.py
> c87b264772 Trac #27744: Make pynormaliz a Feature
> 8b54c36d5e Trac #32859: Wrong display from type() with %display latex
> 76a8d311d5 Trac #32405: sage-bootstrap-python: Prefer pythons that support 
> ssl with SNI
> 05aa11f3f7 Trac #32850: random doctest failure in 
> tests/books/computational-mathematics-with-sagemath/sol/linsolve_doctest.py
> ad620c4e4b Trac #32819: Determinant for multi-component links
> b686ceb88c Trac #32816: random doctest failure in 
> rings/polynomial/polynomial_element_generic.py
> 6dab8f4668 Trac #32715: flit_core: Use sdh_pip_install --no-deps
> f46a88e77d Trac #32713: Apply "configure --enable-editable" also to other 
> sage distribution packages
> f69aa7bd6b Trac #32689: AG code construction: a place given as input gets 
> converted to a prime divisor
> 28d573549c Trac #32380: make NumberFieldFractionalIdeal inherit from 
> Ideal_fractional
> 402efc30a9 Trac #32871: CBF(f(i)) loops for a builtin function f with no 
> corresponding method
> 311fd3481e Trac #32869: fix improper names of several special functions 
> for CBF
> ec03b51b74 Trac #32864: fix E713 and E714 in graphs
> 69a4cc6a68 Trac #32861: Add memory_allocator/distros/conda.txt
> effa97500f Trac #32857: src/requirements.txt: Add memory_allocator
> 1114cde255 Trac #32851: Provide real ball erfi, Ei, Si, Ci, Shi, Chi, li, 
> Li, beta, gamma_inc, gamma_inc_lower via arb
> a95252313a Trac #32815: Update numpy to 1.21.4, networkx to 2.6.3
> 44a35355cc Trac #32778: sage.rings.infinity: Remove hard dependency on 
> real_lazy and real_mpfi
> f560fdc2df Trac #32733: Remove more .all imports
> ac64d4f4f2 Trac #32208: Jupyter notebook receives invalid LaTeX output via 
> MathJax
> aa66d526cf Trac #16567: Use libsingular for polynomial rings over function 
> fields
> 45515aface Trac #32848: various code details in combinat
> a5c797bdd5 Trac #32844: fix some details in sloane_functions
> befd4a21ba Trac #32842: use PARI's fflog() for binary finite fields
> 69d8b99468 Trac #32840: Fix unpickle_global when 
> register_unpickle_override appears in a module not loaded at startup
> 033bbb02d6 Trac #32838: tox.ini: Add gentoo-python3.10
> 2de30a8587 Trac #32833: use libgap in coding
> 85b46be3de Trac #32831: Failure with specific random seed in sandpile.py
> 9d5d4efd54 Trac #32830: fix category of subgroups of finite matrix groups
> d8affa1b28 Trac #32829: fix eps_monom function in RightQuantumWord
> e47173be0a Trac #32824: Bug computing kernel of ring homomorphism GCA
> 2ad6448169 Trac #32823: fix E713 and E714 in interfaces
> 548c83d9ac Trac #32822: fix E713 and E714 in dynamics
> 7ddaf7ad7c Trac #32821: fix E713 and E714 in geometry
> e5da507620 Trac #32813: improved error message 'unknown file extension' 
> provided by sage -t
> a6019fbe40 Trac #32812: remove the "bound method" py2/py3 adapter in 
> doctest parsing
> a99f383bb6 Trac #32807: cleanup various details in combinat
> 95fd5dfa38 Trac #32796: update GMP to version 6.2.1
> d4ecc2a5e1 Trac #32795: docbuild fails in Sphinx conf.py when certain 
> extensions aren't present
> 0d57d68903 Trac #32780: sage.geometry.polyhedron.library: Delay import of 
> rings
> 23ff9d435f Trac #32764: SAGE_ROOT/tox.ini: Make tox -p auto and tox 
> --listenvs useful again
> f16835c8bb Trac #32763: Increase tol