Hi, all
I am the author of package "anamiR".
I got a Warning message "Warning: dependency ''lumi" is not available" when I
installed anamiR.
Also, I tried other packages which depend on "lumi" package, and all got the
same warning message.
Is there any way I can solve this problem?
Best regards
Hi,
I am the author of the package 'anamiR'.
It might be a mistake I made when I was learning how to use git-SVN.
I think I have corrected it.
Many thanks,
Ti-Tai Wang
從: Bioc-devel [bioc-devel-boun...@r-project.org] 代表 Wolfgang Huber
[wolfgang.hu...@emb
Hi, all
I got this error from BioC 3.5 Build Report (only Mac OS X Mavericks (10.9.5)):
##
##
###
### Running command:
###
### /Library/Framewo
Hi all,
I got en error when it tries to create vignette in BUILD:
tokay2 Windows Server 2012 R2 Standard / x64
Error: processing vignette 'IntroductionToanamiR.Rmd' failed with diagnostics:
could not run statement: Lost connection to MySQL server during query
But for Linux or Mac, it all works.
Hi all,
I kept getting the same Error from BUILD REPORT:
Error: processing vignette 'IntroductionToanamiR.Rmd' failed with diagnostics:
object 'table_pre' not found
However, I did confirm my package with R CMD BUILD and CHECK before committing,
and there was no errors and warnings.
I really d
Hi,
The name of my package is anamiR.
it is an object which I try to use in vignette as an example data.
Ti-Tai Wang
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 05:16
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found
:16
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in vignette
Why don't you give us the name of your package so we can look
at it? I suspect something is missing in your Depends, Imports,
or Suggests field. Works for you because you have the missing
package install
I put in the anamiR/data/
Just like other data I used in the vignette.
Ti-Tai
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 05:45
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in vignette
On 04/20/2017 02:36 PM, 王棣台
it should be in my package since anamiR version 1.1.8
That is weird.
Ti-Tai
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 05:49
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in vignette
On 04/20/2017 02:45 PM, Hervé
No,
I definitely have committed it since version 1.1.8
and I can see it right now in my anamiR/data files.
Ti-Tai
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 05:53
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in
Okay,
I will try to commit it again.
Ti-Tai
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 06:00
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in vignette
Also recently you bumped the version from 1.1.* to 1.2.*
then
I find that my data file will not change after I did any commit.
That might be the problem.
Is there anything I forget to do?
Ti-Tai
��: Hervé Pagès [hpa...@fredhutch.org]
寄件日期: 2017年4月21日 上午 06:00
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel
Oh...
I think I forget to add...
Thanks a lot.
Ti-Tai
��: Michael Lawrence [lawrence.mich...@gene.com]
寄件日期: 2017年4月21日 上午 06:12
至: 王棣台
副本: Hervé Pagès; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Object not found in vignette
Did you "svn add"
version while being tested in the
BUILDREPORT?
Ti-Tai
從: Obenchain, Valerie [valerie.obench...@roswellpark.org]
寄件日期: 2017年4月16日 上午 10:58
至: 王棣台; bioc-devel@r-project.org
主旨: Re: [Bioc-devel] Error in BUILD report (anamiR)
It looks like this has been
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