tag 36130 notabug
> close 36130
> stop
>
> Hello,
>
> On Mon, Jun 10, 2019 at 04:50:20PM -0600, Assaf Gordon wrote:
> > On 2019-06-10 12:28 p.m., Heather Wick wrote:
> > > Verbose: This seems to have made the same number of files this time;
> not
> > > sure w
t MH1_R2.fastq.gz) \'
On Fri, Jun 7, 2019 at 11:39 PM Assaf Gordon wrote:
> Hello,
>
> On Fri, Jun 07, 2019 at 09:48:44PM -0400, Heather Wick wrote:
> > Yes, sorry, I should have specified that I already checked that the
> > original fastq files are indeed paired and sor
at 9:29 PM Assaf Gordon wrote:
> Hello,
>
> On Fri, Jun 07, 2019 at 02:23:15PM -0400, Heather Wick wrote:
> > I am using split to split up some large, paired fastq files [...]:
> >
> > zcat MH1_R1.fastq.gz | split - -l 4000 DHT_R1_
> > zcat MH1_R2.fastq
zcatting and piping
the files is not the best way to call split?
Thanks,
~ Heather
--
Heather Wick
PhD Candidate, Human Genetics
Labs of Sarah Wheelan and Vasan Yegnasubramanian
Institute of Genetic Medicine
Johns Hopkins University School of Medicine
hwi...@jhmi.edu