Dear CCP4 users,
We are trying to align two different structures. It would be helpful
for us if anybody has linux compiled align version?
Regards,
Mintu Chandra
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Dear Mintu Chandra,
Do you mean by 'has linux compiled align version', that 'align' is a
program you use for the alignment? I wonder because I have not heard
of it.
If you would be happy with any alignment software, you could use coot
(graphical) or
Mintu Chandra,
align is gerson cohen's program. Unless you talk about another align.
I googled "align for linux Gerson Cohen" and here is what I found -- the
linux version
http://software.compbio.washington.edu/ramp/ramp/src/other_source/align.save.f
Test it and see if it works.
If not, there
Back in 2003 I wrote an email to Gerson Cohen concerning ALIGN and he
told me to contact Boaz Shaanan.
Boaz was so kind to send me his linuxified fortran code of the align
program (reading of a prealigment could not be implemented) that is
still working on our linux machines! We use it a lot,
Please correct me if I'm wrong, but I think lsqman implements G. Cohen's
operator
improvement in DP_improve. Assuming of course if that was the reason why someone
wanted to use align.
Fred
[32m***
Fred Dyda, Ph.D.
M
To: בעז שאנן
Subject: Spam:Re: [ccp4bb] Align linux version
Back in 2003 I wrote an email to Gerson Cohen concerning ALIGN and he told me to contact Boaz Shaanan.
Boaz was so kind to send me his linuxified fortran code of the align program (reading of a prealigment could not be implemented