Package: wnpp
Severity: wishlist
Owner: Manuel Prinz man...@debian.org
* Package name: prank
Version : 100802
Upstream Author : Ari Loytynoja
* URL : http://www.ebi.ac.uk/goldman-srv/prank/src/prank/
* License : GPL2+
Programming Lang: C++
Description
retitle 416269 ITP: pdb2pqr -- Converts Protein Data Bank (PDB) files to PQR
retitle 420734 RFP: propka -- Modifies the protonation state of protein
structures
owner 416269 !
owner 420734 !
thanks
PDB2PQR and PROPKA are packaged and waiting in NEW.
Thanks for this effort, nonetheless!
Best
Am Freitag, den 15.01.2010, 10:49 +0100 schrieb Salvatore Bonaccorso:
Ok, if Alexey would not adopt mathgl by himself, then I will inject it
in the debian-science team repository
That's a reasonable thing to do anyway. If mathgl was in Debian already,
we should preserve previous work and
Hi Salvatore!
Am Sonntag, den 10.01.2010, 15:55 +0100 schrieb Salvatore Bonaccorso:
mathgl is a Dependency of udav. Thus I'm interested to keep matgl, and
I would adopt it. But if there is some other interested too, I would
also help comaintain it, or if there is a scientific team which want
Am Montag, den 23.11.2009, 00:10 +0100 schrieb Francesco Poli:
is there anyone willing to package VisIt for Debian?
My RFP (see bug #395573) was converted into an ITP, but later was
converted back into an RFP...
I did not know about that but started packaging it a while ago. The
files are
Hi Giovanni!
Am Dienstag, den 06.10.2009, 21:05 +0200 schrieb Giovanni Mascellani:
* Package name: mathpiper
[...]
Description : A Java Computer Algebra System
Mathpiper is part of the matrhrider suite, which is a mathematics computing
^
Am Sonntag, den 20.09.2009, 16:32 +0200 schrieb Gaudenz Steinlin:
I'll write to the upstream author about the nameing conflict.
Thanks for taking care of this!
The best way to go would be to rename the upstream package. What's the
purpose of the sinfo binary in the slurm-llnl package? If it
Hi Gaudenz!
As it seems, the executable is named sinfo, which is already supplied
in the SLURM batch system package (slurm-llnl). Because both packages
are useful on clusters, a Conflicts does not make sense, so renaming
seems to be the best option. I CC'ed Gennaro (slurm-llnl maintainer) so
he
Am Mittwoch, den 15.07.2009, 14:58 +0200 schrieb Michael Banck:
Any news about this?
I will have a look at the new upstream version this weekend, Open MPI
kept me busy. Preliminary packaging is still available in Debian Med,
though I'd prefer putting it in Debian Science or Debichem. Any
Am Mittwoch, den 15.07.2009, 16:04 +0200 schrieb Michael Banck:
As pdb2pqr is tighlty coupled to apbs and thus pymol, which are already
maintained by debichem, I think maintaining pdb2pqr in Debichem as well
would make the most sense. And I would be certainly willing to
co-maintain it
Thanks
Hi Vincent,
from just flying over the list of jars, I recognized some of them. I
wrote down the respective packages you might need as build-depends.
Unfortunately, I do not have time to help you with packaging but maybe
this is useful nevertheless.
Am Dienstag, den 13.01.2009, 12:45 +0100
On Fri, Dec 26, 2008 at 01:01:17AM -0500, Adam C Powell IV wrote:
This was just accepted! Yay! I'm now wishist bugging all of my
packages to use it, and will start uploading with hypre tonight.
Nice! Thanks for your work!
This ITP was not closed via the changelog. Should we close it in the
Hi Michael!
Am Samstag, den 06.12.2008, 16:57 +0100 schrieb Michael Banck:
Hi,
any news on this?
Not yet. I pinged upstream about the current status.
What exact license issues were there?
Mostly copyright issues. I do not have the exact list at hand (different
box) but will send it to you
Am Donnerstag, den 20.11.2008, 09:45 -0500 schrieb Adam C Powell IV:
It uses the PETSc system, which Build-Depends on an arch-dependent MPI
implementation, then rules uses readlink to determine which one is the
default alternative, and sets substvars appropriately, whether openmpi,
lam, or
Hi Sylvestre!
Am Mittwoch, den 27.08.2008, 23:49 +0200 schrieb Sylvestre Ledru:
If you need help with this package, I am quite familiar with Java
packaging into Debian and we could do it into the debian-science team if
you want.
Thanks for your offer! I think putting it in the Debian Science
Hi Michael,
thanks for your interest and sponsoring offer! I packaged PDB2PQR with
the help of Steffen Möller (CC'ed). The package is ready but was
rejected due to license issues. Upstream promised to take care of that
but due to holidays this will take some time, so it will not make it
into
reopen 416269
thanks
Hi David!
I'm still working on this but some things need to be resolved first, so
I'm reopening. I'll try to comment on the progress in the future! Thanks
for caring about ITPs, I really think that's a good feature! :)
Best regards
Manuel
signature.asc
Description: Dies
Hello!
Am Dienstag, den 29.01.2008, 09:30 + schrieb W. Borgert:
Package: wnpp
Severity: wishlist
Owner: W. Martin Borgert [EMAIL PROTECTED]
Package name: refcard
Thanks for your great refcard! I've recommended your card for some years
now to Debian newbies and they found it really
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz [EMAIL PROTECTED]
X-Debbugs-Cc: [EMAIL PROTECTED]
* Package name: jfftw
Version : 20070725
Upstream Author : Will Hossack [EMAIL PROTECTED]
* URL : http://www.ph.ed.ac.uk/~wjh/teaching/Java/fft/
* License
Hi Daobing,
I just noticed your ITP. I filed one myself a while ago (#416269) and am
working on that. It turned out that there are several issues that have
to been worked out first. I'm also new to packaging, so the progress was
rather slow but I hope I'll finish it soon.
If you're interested,
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz [EMAIL PROTECTED]
* Package name: libpj-java
Version : 20070703
Upstream Author : Alan Kaminsky [EMAIL PROTECTED]
* URL : http://www.cs.rit.edu/~ark/pj.shtml
* License : GPL
Programming Lang: Java
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz [EMAIL PROTECTED]
* Package name: propka
Version : 1.0.0
Upstream Author : Jan Jensen [EMAIL PROTECTED]
* URL : http://propka.ki.ku.dk/
* License : GPL
Programming Lang: Fortran
Description
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz [EMAIL PROTECTED]
* Package name: pdb2pqr
Version : 1.1.2
Upstream Author : Todd Dolinsky [EMAIL PROTECTED]
* URL : http://pdb2pqr.sourceforge.net/
* License : GPL
Programming Lang: Python, C
Description
Am Samstag, den 24.03.2007, 20:31 -0300 schrieb Felipe Augusto van de
Wiel (faw):
(...) Did you properly setup your MTA? reportbug can send the message
if you are able to send messages from the console. You can use reportbug
to generate the text of the message and then use your MUA to sent it,
Dear WNPP-Team,
sorry I'm not sure if I'm asking at the right place!
I made an ITP request yesterday via reportbug for the package pdb2pqr
which I'm working on at the moment. reportbug quit successfully, and I
was informed to get an email about my request in about an hour. It's
been about a day
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