Re: The fast dictionary pipeline vs. the regular one

Regarding the miss on “cm” in #2, you might want to check out the dictionary xml descriptor or uimafit wiring, depending on which you are using, for the parameter “minimumSpan”. If I recall correctly the default minimum span is 3 characters, however you can reduce it to 2 if desired. Cheers, B

RE: The fast dictionary pipeline vs. the regular one

Hi all, I’m glad that there continues to be interest in the fast alternative to the dictionary lookup and I welcome all testing. GBM actually is Glioblastoma Multiforme – hence the “M”. The WHO name is the abbreviated “Glioblastoma”, but they are actually not (as far as I can discern) differ

RE: Apache cTAKES hosted demos and examples

Very cool. It allows quick reproducible testing. For example: This is extremely useful! -Original Message- From: Pei Chen [mailto:chen...@apache.org] Sent: Friday, June 19, 2015 11:33 AM To: dev@ctakes.apache.org; u...@ctakes.apache.org Subject: Apache cTAKES hosted demos an

RE: RareWord term

Hi Maite, I hope to have a paper out on this soon, so I am keeping things kind of quiet about it - though one can always look at the database and code to get an idea of what it means. For anything else in the module, you can look at the wiki page: https://cwiki.apache.org/confluence/display/CTAK

Re: RareWord term

Hi Sean, Thank you for your response, I ran into this wiki page just after sent you this question and saw it was in progress. Thank you. Maite On Mon, Jun 22, 2015 at 9:54 AM, Finan, Sean < sean.fi...@childrens.harvard.edu> wrote: > Hi Maite, > I hope to have a paper out on this soon, so I am k

Mvn package error

Hi, I tried to compile the 3.2.3 version of Ctakes, got the following error. Tests in error: TestClearNLPPipeLine(org.apache.ctakes.dependency.parser.ae.util.TestClearNLPAnalysisEngines): URI is not hierarchical I realized this error was resolved before in this thread

RE: TimeLanes

Hi Maashu, TimeLanes is currently a prototype gui under development and there is probably no information about it on the web. It is in sandbox because it isn't part of the ctakes release and is missing much needed functionality. For instance, It should display basic information about the pati

RE: TimeLanes

The cTAKES temporal component is in the main release. You can get the system output, but as Sean said TimeLanes does not consume it yet. A demo of the cTAKES temporal component can be found in Getting Started -> Demos. Pei just put it up there, thank you very much, Pei! --Guergana -Origina

RE: TimeLanes

Just for clarification, TimeLanes does consume ctakes output (.xmi), but it does not produce it. In other words, you cannot hand it a plain text file and expect automatic processing. Yet. -Original Message- From: Savova, Guergana [mailto:guergana.sav...@childrens.harvard.edu] Sent: Mo

Re: TimeLanes

Thanks so much for your replies, Sean and Guergana! I'm very excited for the possibilities of this project, and hope to contribute in some small way :) Cheers, -Maashu On Mon, Jun 22, 2015 at 12:09 PM, Finan, Sean < sean.fi...@childrens.harvard.edu> wrote: > Just for clarification, TimeLanes d