ntire .top file.
-Justin
Regards,
Payman
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org]
On Behalf Of Justin A. Lemkul
Sent: June 8, 2009 1:53 PM
To: Gromacs Users' List
Subject: Re: [gmx-users] gromacs on glacier
Payman Pirzadeh wrote:
Dear
emkul
Sent: June 8, 2009 1:53 PM
To: Gromacs Users' List
Subject: Re: [gmx-users] gromacs on glacier
Payman Pirzadeh wrote:
> Dear Justin,
> Here is the mpich version:
> MPICH Version: 1.2.7p1
> MPICH Release date: $Date: 2005/11/04 11:54:51$
> MPICH Patches ap
on, it should pretty much always work :)
-Justin
Payman
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org]
On Behalf Of Justin A. Lemkul
Sent: June 8, 2009 11:56 AM
To: Gromacs Users' List
Subject: Re: [gmx-users] gromacs on glacier
P
:56 AM
To: Gromacs Users' List
Subject: Re: [gmx-users] gromacs on glacier
Payman Pirzadeh wrote:
> Hi Justin,
> Since the manual itself was not sufficient, I asked some other people who
> are running GROMACS in our group (but they run only on 2 CPUs). Here are
the
> steps I to
y for tons of e-mails.
Payman
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org]
On Behalf Of Justin A. Lemkul
Sent: June 8, 2009 11:12 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] gromacs on glacier
Payman Pirzadeh wro
an
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org]
On Behalf Of Justin A. Lemkul
Sent: June 8, 2009 11:12 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] gromacs on glacier
Payman Pirzadeh wrote:
> Hi,
>
> I had the c
Payman Pirzadeh wrote:
Hi,
I had the chance to run the GROMACS 4.0.4 on another cluster. Same
problem still persists. But what I found is that it can be run on a node
with 2 CPUs, but as soon as the number of nodes are increased to 2, 3, …
it will crash. Following are the last lines reporte
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