Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread GPC Informatics
#580: Data Characterization - Cycle 2, Refresh 2 Tracking ---+- Reporter: lv | Owner: preeder Type: problem| Status: assigned Priority: major | Milestone: cdm-cycle3 Component: data-stds |

Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread GPC Informatics
#580: Data Characterization - Cycle 2, Refresh 2 Tracking ---+- Reporter: lv | Owner: lv Type: problem| Status: assigned Priority: major | Milestone: cdm-cycle3 Component: data-stds | Resol

Re: [Gpc-deid] Agenda for todays webex meeting

2017-04-07 Thread Kowalski, George
Laurel / All , Ah yes there seems to have been a problem with the email list , it is now sending all the queued up emails that we’ve sent over the last few days. So we had our first webex meeting this last Tuesday. Notes are here : https://wiki.ctri.mcw.edu/display/GDD/April+2017+Meeting We

RE: Reminder to complete SNOW SHRINE 1.20.1 verification step!

2017-04-07 Thread Brittany Zschoche
I noticed the significant lag as well, and it turns out it's on KUMC's end. IR is working to address it. Brittany From: Gpc-dev [mailto:gpc-dev-boun...@listserv.kumc.edu] On Behalf Of Wanta Keith M Sent: Friday, April 07, 2017 11:48 AM To: GPC-DEV@LISTSERV.KUMC.EDU Subject: RE: Reminder to comp

RE: [gpc-informatics] #551: next-D labs for cohort selection: fasting glucose, HbA1c

2017-04-07 Thread Bernard Black
A comment on fasting versus random glucose test. In Northwestern EDW, 99.999% of glucose tests are recorded as random, whether or not the patient supposedly fasted overnight before the test. Bernie * Bernard S. Black Chabraja Professo

RE: Reminder to complete SNOW SHRINE 1.20.1 verification step!

2017-04-07 Thread Wanta Keith M
This email got caught on one of the email servers and never got through. I had sent it out on 4/4. We are looking into why this occurred. If you send out emails to gpc-...@listserver.kumc.edu, make sure you see the email in your inbox right after you send i

RE: [gpc-informatics] #551: next-D labs for cohort selection: fasting glucose, HbA1c

2017-04-07 Thread Dan Connolly
I assume nearly everything is subject to change (hence careful use of version control). But meanwhile, I can make progress based on what I've got, so that's what I 'm doing. -- Dan From: Al'ona Furmanchuk [furmanc...@icnanotox.org] Sent: Friday, April 07, 2017 1

Re: [gpc-informatics] #551: next-D labs for cohort selection: fasting glucose, HbA1c

2017-04-07 Thread Al'ona Furmanchuk
Please, disregard Apr. 4th document on labs for now. It turned to have errors due to wrong application of sorting command. Earlier next week we will provide corrected version. Apologies. On Fri, Apr 7, 2017 at 11:14 AM, GPC Informatics wrote: > #551: next-D labs for cohort selection: fasting gl

RE: error on Babel upload

2017-04-07 Thread Dan Connolly
I don't recognize those symptoms exactly, but we did develop a mechanism to upload large files to babel: " A few sites have verified that we can bulk upload terms to babel as follows: 1. Create a CSV file of terms; for example, from sqldeveloper, right click on a table of terms and export t

Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread Debbie Yoshihara
Yes, dlyos...@wisc.edu will be doing this for C4UWM. From: Gpc-dev on behalf of GPC Informatics Sent: Friday, April 7, 2017 10:54:54 AM To: verhagen.lau...@mcrf.mfldclin.edu; mprit...@kumc.edu; dconno...@kumc.edu; nicholas-c-sm...@uiowa.edu; danh...@regenstrief

Re: [gpc-informatics] #571: characterization of data from next-d GPC sites

2017-04-07 Thread Al'ona Furmanchuk
Those Ukrainian last names... sorry for complication. Alona. On Thu, Apr 6, 2017 at 12:21 PM, GPC Informatics wrote: > #571: characterization of data from next-d GPC sites > --+-- > Reporter: afurmanchuck | Owner: preeder > Type: task

Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread GPC Informatics
#580: Data Characterization - Cycle 2, Refresh 2 Tracking ---+- Reporter: lv | Owner: mprittie Type: problem| Status: assigned Priority: major | Milestone: cdm-cycle3 Component: data-stds |

Re: [gpc-informatics] #545: Study sample and DM sample definition for next-d

2017-04-07 Thread GPC Informatics
#545: Study sample and DM sample definition for next-d --+ Reporter: dconnolly | Owner: meiliu Type: task | Status: assigned Priority: major | Milestone: next-d Component: data-sharing | Resolution

Reminder to complete SNOW SHRINE 1.20.1 verification step!

2017-04-07 Thread Wanta Keith M
SNOW SHRINE Administrators, We're still working on the SNOW on-boarding phase. (Close to half way there) To complete your SNOW SHRINE install for this on-boarding phase, please schedule time with me at your earliest convenience for SHRINE 1.20.1 verification to ensure your SHRINE configuratio

error on Babel upload

2017-04-07 Thread Debbie Yoshihara
When I try and upload our MAR 2017 Babel files, the first one, demographics uploads fine (smallest file). However any of the other files, it says on the lower right uploading, then when it gets to 100%, it says No server supplied! And I can't get any of the larger files to upload. Any one

Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread GPC Informatics
#580: Data Characterization - Cycle 2, Refresh 2 Tracking ---+- Reporter: lv | Owner: nsmith Type: problem| Status: assigned Priority: major | Milestone: cdm-cycle3 Component: data-stds | R

Re: [gpc-informatics] #580: Data Characterization - Cycle 2, Refresh 2 Tracking

2017-04-07 Thread GPC Informatics
#580: Data Characterization - Cycle 2, Refresh 2 Tracking ---+- Reporter: lv | Owner: nsmith Type: problem| Status: assigned Priority: major | Milestone: cdm-cycle3 Component: data-stds | R