Re: [PATCH] Add prodigal.

Oops, now all lines <= 80 chars. On 27/06/15 09:26, Ben Woodcroft wrote: A popular tool in microbial ecology. >From 6e81c91c5e444cddf6e193f22d212b1eee3a5cab Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Sat, 27 Jun 2015 09:29:23 +1000 Subject: [PATCH] gnu: Add prodigal. * gnu/packages/b

[PATCH] Add prodigal.

A popular tool in microbial ecology. >From ebec585b41d6a2bad6b9b04b07f0003ede389f1a Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Sat, 27 Jun 2015 09:24:08 +1000 Subject: [PATCH] gnu: Add prodigal. * gnu/packages/bioinformatics.scm (prodigal): New variable. --- gnu/packages/bioinformatics.

[PATCH 2/4] gnu: Add python-pyflakes.

* gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables. --- gnu/packages/python.scm | 24 1 file changed, 24 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 1079843..12eabab 100644 --- a/gnu/packages/python.scm +++

[PATCH 4/4] gnu: Add python-flake8.

* gnu/packages/python.scm (python-flake8, python2-flake8): New variables. --- gnu/packages/python.scm | 73 + 1 file changed, 73 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index b35af55..47989f9 100644 --- a/gnu/pac

[PATCH 1/4] gnu: Add python-pep8.

* gnu/packages/python.scm (python-pep8, python2-pep8): New variables. --- gnu/packages/python.scm | 27 +++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 1b3934b..1079843 100644 --- a/gnu/packages/python.scm +++ b/gnu

[PATCH 3/4] gnu: Add python-mccabe.

* gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables. --- gnu/packages/python.scm | 25 + 1 file changed, 25 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 12eabab..b35af55 100644 --- a/gnu/packages/python.scm +++ b/g

[PATCH 0/4] Add flake8 and its dependencies.

This patch series adds flake8, a tool commonly used by Python developers. Cyril. --- Cyril Roelandt (4): gnu: Add python-pep8. gnu: Add python-pyflakes. gnu: Add python-mccabe. gnu: Add python-flake8. gnu/packages/python.scm | 149 1 file

Re: [PATCH] gnu: Add rhythmbox.

> Updated patch attached. So, I applied the patch, built rhythmbox, and installed it into a separate profile. It starts up fine and begins importing files from ~/Music but I get a *lot* of import errors: “Couldn’t create ‘uridecodebin’ element” I see this for a great many ogg and mp3 files i

Re: [PATCH] gnu/package/pv.scm (pv): New file, new variable

On 26-Jun-2015 3:33 pm, "Alex Kost" wrote: > Claes Wallin (韋嘉誠) (2015-06-25 00:35 +0300) wrote: > > From e93d21889bdcbed02a517f30d8401a3bb144cce4 Mon Sep 17 00:00:00 2001 > > From: Claes Wallin > > Date: Fri, 19 Jun 2015 20:12:09 +0200 > > Subject: [PATCH] gnu: Add pv. > > > > * gnu/package/pv.

Re: [PATCH] gnu/package/pv.scm (pv): New file, new variable

Claes Wallin (韋嘉誠) (2015-06-25 00:35 +0300) wrote: > On Tue, Jun 23, 2015 at 1:43 PM, Alex Kost wrote: > >> --8<---cut here---start->8--- >> gnu: Add pv. >> >> * gnu/package/pv.scm (pv): New file. >> * gnu-system.am (GNU_SYSTEM_MODULES): Add it. >> --8<

Re: [PATCH] Add sfarklib & sfarkxtc

Ricardo Wurmus skribis: > From bac01c1b64ed14fc1c26f35961f1c8fd29caabcb Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Tue, 23 Jun 2015 21:25:19 +0200 > Subject: [PATCH 1/2] gnu: Add sfarklib. > > * gnu/packages/compression.scm (sfarklib): New variable. [...] > +(home-page "https:

Re: [PATCH] Add fastlmm & pysnptools.

Ricardo Wurmus skribis: > From b88c44394c1a6e2e9a5932ac2a3a9b431408c742 Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Fri, 12 Jun 2015 15:46:40 +0200 > Subject: [PATCH 1/2] gnu: Add python2-pysnptools. > > * gnu/packages/python.scm (python2-pysnptools): New variable. LGTM. > +(ho

Gmp test failure on armhf

Hello, I installed guix via the binary tarball on my novena, then built a toolchain with guix and rebuilt the guix from git with it. So far, I am still using the binary tarball daemon. When running ./pre-inst-env guix build hello the build fails with a test failure in gmp. Before investigating

Re: [PATCH] Add yaggo.

To be clear (to avoid me being pigeon holed as the guy who wants something that is not pure), we all agree on the following: We agree to allow people to use bundler and gems if they want to. We agree that gems can be packaged in Guix (as long as there is no binary code). And we agree that we should

Re: [PATCH] Add default GCC and gfortran.

Ludovic Courtès writes: > Eric Bavier skribis: > >> I think the convention would be to collapse the files references, and >> just list the variables, e.g.: >> >> * gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu) >> (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise. >>