[PyMOL] multi distance object to single distance objects

Hi, I used the distance command: cmd.dist(" (/mol1///1/C)","(/mol1///2/C*)"). In pymol it creates a new distance object with all distances from C in Residue 1 to every C in Residue 2. How can I split this object to single distance objects? Or there are better possibilities because I want to w

[PyMOL] nuccyl's URL has changed!

Dear PyMOL users, Recently I moved, and so has nuccyl's home page. Please update your bookmarks to: http://www.biosci.ki.se/groups/ljo/software/nuccyl.html With best regards, Luca - Luca Jovine, Ph.D. Karolinska Institutet Department

[PyMOL] multi distance object to single distance objects

Hi, I used the distance command: cmd.dist(" (/mol1///1/C)","(/mol1///2/C*)"). In pymol it creates a new distance object with all distances from C in Residue 1 to every C in Residue 2. How can I split this object to single distance objects? Or there are better possibilities because I want to w

[PyMOL] Rendering large surfaces

I have been trying to coax Pymol to raytrace or output to pov (make_pov.py) some very large surfaces and I am unable to. It works for ~33,000 atoms, but chokes on ~61,000. I would like to get up to >100,000. Anybody have some good tips? I have tried adjusting hash_max, but I think this my be a

RE: [PyMOL] Before the release of PyMol 0.99: Nucleotides and CGO

Same script, but with hydrogen bonds between nucleotides. Load the pdb file 127D, run the script and type ‘DrawNT’ in PyMol command line… I have a question, maybe Warren you can answer: I wanted to use the set_color command to define a new color for the Hydrogen bonds (MyRGBColor = [x,y,z]