Hello,
I have two questions regarding FIRMAGene:
1. The same as the first in this thread: using the code from sup3.r
when I try to load the FIRMAGene library or execute the FIRMAGene
command I get the following errors:
> library(FIRMAGene)
Error in base::library(...) : there is no package called 'FIRMAGene'
> fg <- FIRMAGene(plm, idsToUse=u)
Error: could not find function "FIRMAGene"
I'm using aroma.affymetrix v1.1.0 with R2.9.0 on MacOSX 10.5.7
2. I'm unsure of what this command is doing and how it needs to be
changed to accommodate my own data:
cls <- gsub("TisMap_","",gsub("_0[1-3]_v1_WTGene1","",getNames(cs)))
Many thanks,
Nick
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