Re: [base] BatchDataImporter broken w/ 2.4?
Hi all, Sorry everyone for my late response or contribution, I have been away. I hope this short email will address some of the issues raised on the tab2mage importer Owing to the fact that the importer supports only affymetrix, genepix and agilent platforms, I reckon interested users can stick to the batch importer for the non- supported platforms. However, the tab2mage importer can be extended to other platforms but will require a little bit of coding. Incidentally does anyone know of a SOFT to Tab2Mage converter for people wanting to import GEO data? I do not know much about SOFT, hence do not know if a converter exists or not. Regards, ¬Dominic - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to [EMAIL PROTECTED]
Re: [base] Error uploading CDF file
jesse paquette wrote: Ok, I deleted the extra line at the end of the show_exception file. The new error message is: File creation in base.config[userfiles] failed There can be two reasons: 1) The path specified in base.config for the userfiles property doesn't exists 2) The user that Tomcat runs as doesn't have permission to create new files in that directory I'm guessing it's 1) I changed the Tomcat configuration to run as a user with the proper permissions. However, the directory specified by the base.config[userfiles] variable exists. So, I'm rather stuck here. Can you submit the entire stacktrace? If it is not 1 or 2 there might be some information about what the problem is. /Nicklas - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to [EMAIL PROTECTED]
Re: [base] following 2.1 getting started
In section 1c the getting started manual asks me to configure a Reporter map importer plugin for Genepix. I've set up the Reporter importer and Raw data importer plugins, but there is no entry in the plugins list for Reporter map importer. Has this been done away with between versions 2.1 and 2.4.0? I tried to create the plugin myself using the class net.sf.basedb.plugins.ReporterMapFlatFileImporter, but the system doesn't seem to let me. Make sure you are logged in as a user with administrator privileges. This plug-in is not activated for regular users. Yes, that was it. Thanks. Jesse _ Sök på vilken webbsida som helst med hög säkerhet. Skaffa Windows Live-verktygsfältet i dag -- helt gratis! http://toolbar.live.com- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to [EMAIL PROTECTED]
