Re: [Bioc-devel] RGL warning
Ideally yes all ERROR/WARNING/NOTES should be cleaned up. Depending on the NOTES/WARNINGS some may be out of your control. You could open a discussion with your reviewer on your open submission for BioTIP to see if there could be an exception or what else could be done about it. https://github.com/Bioconductor/Contributions/issues/1220 Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Zhezhen Wang Sent: Wednesday, September 11, 2019 10:49 AM To: Kasper Daniel Hansen Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] RGL warning Thanks, do we need to solve all the warnings? Zhezhen From: Kasper Daniel Hansen Sent: Wednesday, September 11, 2019 8:12 AM To: Zhezhen Wang Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] RGL warning GLX is a module for X11. You need that module installed in whatever X11 installation you have. My understanding (which is weak) is that GLX is a standard module so it is weird it is missing. On Tue, Sep 10, 2019 at 12:39 PM Zhezhen Wang mailto:zhez...@uchicago.edu>> wrote: Hi I am having the following warnings and not sure what to update. Warning in rgl.init(initValue, onlyNULL) : RGL: GLX extension missing on server Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE The package github link is here : https://github.com/xyang2uchicago/BioTIP Zhezhen [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Best, Kasper [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] RGL warning
Thanks, do we need to solve all the warnings? Zhezhen From: Kasper Daniel Hansen Sent: Wednesday, September 11, 2019 8:12 AM To: Zhezhen Wang Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] RGL warning GLX is a module for X11. You need that module installed in whatever X11 installation you have. My understanding (which is weak) is that GLX is a standard module so it is weird it is missing. On Tue, Sep 10, 2019 at 12:39 PM Zhezhen Wang mailto:zhez...@uchicago.edu>> wrote: Hi I am having the following warnings and not sure what to update. Warning in rgl.init(initValue, onlyNULL) : RGL: GLX extension missing on server Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE The package github link is here : https://github.com/xyang2uchicago/BioTIP Zhezhen [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Best, Kasper [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] RGL warning
GLX is a module for X11. You need that module installed in whatever X11 installation you have. My understanding (which is weak) is that GLX is a standard module so it is weird it is missing. On Tue, Sep 10, 2019 at 12:39 PM Zhezhen Wang wrote: > Hi > > I am having the following warnings and not sure what to update. > > Warning in rgl.init(initValue, onlyNULL) : > RGL: GLX extension missing on server > Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE > > The package github link is here : https://github.com/xyang2uchicago/BioTIP > > Zhezhen > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- Best, Kasper [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] RGL warning
Hi I am having the following warnings and not sure what to update. Warning in rgl.init(initValue, onlyNULL) : RGL: GLX extension missing on server Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE The package github link is here : https://github.com/xyang2uchicago/BioTIP Zhezhen [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
