[Bioc-devel] Single Package Builder for new submissions
We will be doing some testing on the single package builder for new submissions. Autogeneration of build reports on version bumps may be temporarily unavailable. We hope to have minimal distruption. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Single Package Builder for New Submissions
The single package builder should now be fixed and produce build reports on version bumps. Thank you for your patience. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Shepherd, Lori Sent: Monday, May 6, 2019 10:03:24 AM To: bioc-devel Subject: [Bioc-devel] Single Package Builder for New Submissions We are experiencing some issues with the Single Package Builder relating to the release. Currently builds may not be executing with versions bumps or you may get a report with a Fatal error: cannot create 'R_TempDir' We are working on a solution and hope to have it running as normal soon. Thank you. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] Single Package Builder for New Submissions
We are experiencing some issues with the Single Package Builder relating to the release. Currently builds may not be executing with versions bumps or you may get a report with a Fatal error: cannot create 'R_TempDir' We are working on a solution and hope to have it running as normal soon. Thank you. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Single Package Builder for New Submissions
We are experience some intermittent drops in connectivity and are investigating this matter. Thanks for pointing these out. We hope to have to issue resolved shortly. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Ludwig Geistlinger Sent: Monday, January 28, 2019 7:53:05 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] Single Package Builder for New Submissions Dear Lori, Is the update of the MAC SPB still ongoing? Today, I managed to produce three different build reports - from "all-ok" to "timeout" and "errors" just by documentation enhancements and version number bumps, ie no changes on the actual R stuff (code, vignette chunks, examples, etc): http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128130552.html http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128145534.html http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128160110.html Particularly, the mac builder doesn't seem to have an internet connection? Thank you, Ludwig -- Dr. Ludwig Geistlinger CUNY School of Public Health From: Bioc-devel on behalf of Shepherd, Lori Sent: Tuesday, January 22, 2019 9:26 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] Single Package Builder for New Submissions During this week we will be updating the Single Package Builder to use a new MAC builder. During this updating and testing, the Single Package Builder may produce some sporadic ERRORs or experience intermittent periods of downtime. We will be as quick as possible and hope to keep the interruptions to a minimum. We appreciate your understanding. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] Single Package Builder for New Submissions
Dear Lori, Is the update of the MAC SPB still ongoing? Today, I managed to produce three different build reports - from "all-ok" to "timeout" and "errors" just by documentation enhancements and version number bumps, ie no changes on the actual R stuff (code, vignette chunks, examples, etc): http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128130552.html http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128145534.html http://bioconductor.org/spb_reports/CNVRanger_buildreport_20190128160110.html Particularly, the mac builder doesn't seem to have an internet connection? Thank you, Ludwig -- Dr. Ludwig Geistlinger CUNY School of Public Health From: Bioc-devel on behalf of Shepherd, Lori Sent: Tuesday, January 22, 2019 9:26 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] Single Package Builder for New Submissions During this week we will be updating the Single Package Builder to use a new MAC builder. During this updating and testing, the Single Package Builder may produce some sporadic ERRORs or experience intermittent periods of downtime. We will be as quick as possible and hope to keep the interruptions to a minimum. We appreciate your understanding. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] Single Package Builder for New Submissions
During this week we will be updating the Single Package Builder to use a new MAC builder. During this updating and testing, the Single Package Builder may produce some sporadic ERRORs or experience intermittent periods of downtime. We will be as quick as possible and hope to keep the interruptions to a minimum. We appreciate your understanding. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
