Re: [Bioc-devel] BioC 3.2 branch created
Just a small suggestion, it might be helpful to put a date on https://www.bioconductor.org/news/bioc_3_2_release/ - currently it's not obvious when you land on that page when the announcement was made, or that this is the current release version. Thanks core team for your hard work in getting another release out on schedule! On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum wrote: > > The BioC 3.2 branch is now ready. > > Remember, you always have access to 2 versions of your package: > the "release" and the "devel" versions. > > Right now the "release" version of your package (which is not > officially released yet but will be tomorrow if > everything goes well) is in the 3.2 branch and accessible at: > > https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ > > > Only bug fixes and documentation improvements should go here. > > As always the "devel" version of your package is at: > > https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ > > Similarly for experiment packages, where your package is available in > devel at > > https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ > > The release branch of it is in: > > https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ > > > > Normal development of your package can now resume here. > > Please let us know if you have any questions. > > > Thanks! > > Dan > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- Levi Waldron Assistant Professor of Biostatistics City University of New York School of Public Health, Hunter College 2180 3rd Ave Rm 538 New York NY 10035-4003 phone: 212-396-7747 www.waldronlab.org [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
Done, the change should appear within 20 minutes. Thanks for the suggestion. Dan - Original Message - > From: "Levi Waldron" > To: "bioc-devel" > Sent: Friday, October 16, 2015 8:23:17 AM > Subject: Re: [Bioc-devel] BioC 3.2 branch created > > Just a small suggestion, it might be helpful to put a date on > https://www.bioconductor.org/news/bioc_3_2_release/ - currently it's > not > obvious when you land on that page when the announcement was made, or > that > this is the current release version. > > Thanks core team for your hard work in getting another release out on > schedule! > > > > On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum > > wrote: > > > > > The BioC 3.2 branch is now ready. > > > > Remember, you always have access to 2 versions of your package: > > the "release" and the "devel" versions. > > > > Right now the "release" version of your package (which is not > > officially released yet but will be tomorrow if > > everything goes well) is in the 3.2 branch and accessible at: > > > > https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ > > > > > > Only bug fixes and documentation improvements should go here. > > > > As always the "devel" version of your package is at: > > > > https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ > > > > Similarly for experiment packages, where your package is available > > in > > devel at > > > > https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ > > > > The release branch of it is in: > > > > https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ > > > > > > > > Normal development of your package can now resume here. > > > > Please let us know if you have any questions. > > > > > > Thanks! > > > > Dan > > > > ___ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > > > -- > Levi Waldron > Assistant Professor of Biostatistics > City University of New York School of Public Health, Hunter College > 2180 3rd Ave Rm 538 > New York NY 10035-4003 > phone: 212-396-7747 > www.waldronlab.org > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
Hi Dan, Thanks for making that change. Would be great to have this for the previous releases too. One often lands on an announcement page directly from Google and has no easy way to tell when that release happened. Thanks, H. On 10/16/2015 08:45 AM, Dan Tenenbaum wrote: Done, the change should appear within 20 minutes. Thanks for the suggestion. Dan - Original Message - From: "Levi Waldron" To: "bioc-devel" Sent: Friday, October 16, 2015 8:23:17 AM Subject: Re: [Bioc-devel] BioC 3.2 branch created Just a small suggestion, it might be helpful to put a date on https://www.bioconductor.org/news/bioc_3_2_release/ - currently it's not obvious when you land on that page when the announcement was made, or that this is the current release version. Thanks core team for your hard work in getting another release out on schedule! On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum wrote: The BioC 3.2 branch is now ready. Remember, you always have access to 2 versions of your package: the "release" and the "devel" versions. Right now the "release" version of your package (which is not officially released yet but will be tomorrow if everything goes well) is in the 3.2 branch and accessible at: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ Only bug fixes and documentation improvements should go here. As always the "devel" version of your package is at: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ Similarly for experiment packages, where your package is available in devel at https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ The release branch of it is in: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ Normal development of your package can now resume here. Please let us know if you have any questions. Thanks! Dan ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Levi Waldron Assistant Professor of Biostatistics City University of New York School of Public Health, Hunter College 2180 3rd Ave Rm 538 New York NY 10035-4003 phone: 212-396-7747 www.waldronlab.org [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax:(206) 667-1319 ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
- Original Message - > From: "Hervé Pagès" > To: "Dan Tenenbaum" , "Levi Waldron" > > Cc: "bioc-devel" > Sent: Friday, October 16, 2015 10:07:03 AM > Subject: Re: [Bioc-devel] BioC 3.2 branch created > > Hi Dan, > > Thanks for making that change. Would be great to have this for the > previous releases too. One often lands on an announcement page > directly > from Google and has no easy way to tell when that release happened. > Just committed the change, it should show up son. Looks like we used to do this and then stopped at some point. Dan > Thanks, > H. > > > On 10/16/2015 08:45 AM, Dan Tenenbaum wrote: > > Done, the change should appear within 20 minutes. Thanks for the > > suggestion. > > Dan > > > > > > - Original Message - > >> From: "Levi Waldron" > >> To: "bioc-devel" > >> Sent: Friday, October 16, 2015 8:23:17 AM > >> Subject: Re: [Bioc-devel] BioC 3.2 branch created > >> > >> Just a small suggestion, it might be helpful to put a date on > >> https://www.bioconductor.org/news/bioc_3_2_release/ - currently > >> it's > >> not > >> obvious when you land on that page when the announcement was made, > >> or > >> that > >> this is the current release version. > >> > >> Thanks core team for your hard work in getting another release out > >> on > >> schedule! > >> > >> > >> > >> On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum > >> > >> wrote: > >> > >>> > >>> The BioC 3.2 branch is now ready. > >>> > >>> Remember, you always have access to 2 versions of your package: > >>> the "release" and the "devel" versions. > >>> > >>> Right now the "release" version of your package (which is not > >>> officially released yet but will be tomorrow if > >>> everything goes well) is in the 3.2 branch and accessible at: > >>> > >>> https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ > >>> > >>> > >>> Only bug fixes and documentation improvements should go here. > >>> > >>> As always the "devel" version of your package is at: > >>> > >>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ > >>> > >>> Similarly for experiment packages, where your package is > >>> available > >>> in > >>> devel at > >>> > >>> https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ > >>> > >>> The release branch of it is in: > >>> > >>> https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ > >>> > >>> > >>> > >>> Normal development of your package can now resume here. > >>> > >>> Please let us know if you have any questions. > >>> > >>> > >>> Thanks! > >>> > >>> Dan > >>> > >>> ___ > >>> Bioc-devel@r-project.org mailing list > >>> https://stat.ethz.ch/mailman/listinfo/bioc-devel > >>> > >> > >> > >> > >> -- > >> Levi Waldron > >> Assistant Professor of Biostatistics > >> City University of New York School of Public Health, Hunter > >> College > >> 2180 3rd Ave Rm 538 > >> New York NY 10035-4003 > >> phone: 212-396-7747 > >> www.waldronlab.org > >> > >>[[alternative HTML version deleted]] > >> > >> ___ > >> Bioc-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/bioc-devel > >> > > > > ___ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > -- > Hervé Pagès > > Program in Computational Biology > Division of Public Health Sciences > Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N, M1-B514 > P.O. Box 19024 > Seattle, WA 98109-1024 > > E-mail: hpa...@fredhutch.org > Phone: (206) 667-5791 > Fax:(206) 667-1319 > ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
On 10/16/2015 10:52 AM, Dan Tenenbaum wrote: - Original Message - From: "Hervé Pagès" To: "Dan Tenenbaum" , "Levi Waldron" Cc: "bioc-devel" Sent: Friday, October 16, 2015 10:07:03 AM Subject: Re: [Bioc-devel] BioC 3.2 branch created Hi Dan, Thanks for making that change. Would be great to have this for the previous releases too. One often lands on an announcement page directly from Google and has no easy way to tell when that release happened. Just committed the change, it should show up son. Looks like we used to do this and then stopped at some point. Great. Thanks Dan! H. Dan Thanks, H. On 10/16/2015 08:45 AM, Dan Tenenbaum wrote: Done, the change should appear within 20 minutes. Thanks for the suggestion. Dan - Original Message - From: "Levi Waldron" To: "bioc-devel" Sent: Friday, October 16, 2015 8:23:17 AM Subject: Re: [Bioc-devel] BioC 3.2 branch created Just a small suggestion, it might be helpful to put a date on https://www.bioconductor.org/news/bioc_3_2_release/ - currently it's not obvious when you land on that page when the announcement was made, or that this is the current release version. Thanks core team for your hard work in getting another release out on schedule! On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum wrote: The BioC 3.2 branch is now ready. Remember, you always have access to 2 versions of your package: the "release" and the "devel" versions. Right now the "release" version of your package (which is not officially released yet but will be tomorrow if everything goes well) is in the 3.2 branch and accessible at: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ Only bug fixes and documentation improvements should go here. As always the "devel" version of your package is at: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ Similarly for experiment packages, where your package is available in devel at https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ The release branch of it is in: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ Normal development of your package can now resume here. Please let us know if you have any questions. Thanks! Dan ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Levi Waldron Assistant Professor of Biostatistics City University of New York School of Public Health, Hunter College 2180 3rd Ave Rm 538 New York NY 10035-4003 phone: 212-396-7747 www.waldronlab.org [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax:(206) 667-1319 -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax:(206) 667-1319 ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
Nice addition, thank you. Just want to note that now the 3.1 page says "April 17, 2005". Thats a long time ago! I guess it means "April 17, 2015". Diego On Sat, Oct 17, 2015 at 3:30 AM, Hervé Pagès wrote: > On 10/16/2015 10:52 AM, Dan Tenenbaum wrote: >> >> >> >> - Original Message - >>> >>> From: "Hervé Pagès" >>> To: "Dan Tenenbaum" , "Levi Waldron" >>> >>> Cc: "bioc-devel" >>> Sent: Friday, October 16, 2015 10:07:03 AM >>> Subject: Re: [Bioc-devel] BioC 3.2 branch created >>> >>> Hi Dan, >>> >>> Thanks for making that change. Would be great to have this for the >>> previous releases too. One often lands on an announcement page >>> directly >>> from Google and has no easy way to tell when that release happened. >>> >> >> Just committed the change, it should show up son. Looks like we used to do >> this and then stopped at some point. > > > Great. Thanks Dan! > > H. > > >> Dan >> >> >>> Thanks, >>> H. >>> >>> >>> On 10/16/2015 08:45 AM, Dan Tenenbaum wrote: >>>> >>>> Done, the change should appear within 20 minutes. Thanks for the >>>> suggestion. >>>> Dan >>>> >>>> >>>> - Original Message - >>>>> >>>>> From: "Levi Waldron" >>>>> To: "bioc-devel" >>>>> Sent: Friday, October 16, 2015 8:23:17 AM >>>>> Subject: Re: [Bioc-devel] BioC 3.2 branch created >>>>> >>>>> Just a small suggestion, it might be helpful to put a date on >>>>> https://www.bioconductor.org/news/bioc_3_2_release/ - currently >>>>> it's >>>>> not >>>>> obvious when you land on that page when the announcement was made, >>>>> or >>>>> that >>>>> this is the current release version. >>>>> >>>>> Thanks core team for your hard work in getting another release out >>>>> on >>>>> schedule! >>>>> >>>>> >>>>> >>>>> On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum >>>>> >>>>> wrote: >>>>> >>>>>> >>>>>> The BioC 3.2 branch is now ready. >>>>>> >>>>>> Remember, you always have access to 2 versions of your package: >>>>>> the "release" and the "devel" versions. >>>>>> >>>>>> Right now the "release" version of your package (which is not >>>>>> officially released yet but will be tomorrow if >>>>>> everything goes well) is in the 3.2 branch and accessible at: >>>>>> >>>>>> >>>>>> https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ >>>>>> >>>>>> >>>>>> Only bug fixes and documentation improvements should go here. >>>>>> >>>>>> As always the "devel" version of your package is at: >>>>>> >>>>>> >>>>>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ >>>>>> >>>>>> Similarly for experiment packages, where your package is >>>>>> available >>>>>> in >>>>>> devel at >>>>>> >>>>>> https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ >>>>>> >>>>>> The release branch of it is in: >>>>>> >>>>>> >>>>>> https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/ >>>>>> >>>>>> >>>>>> >>>>>> Normal development of your package can now resume here. >>>>>> >>>>>> Please let us know if you have any questions. >>>>>> >>>>>> >>>>>> Thanks! >>>>>> >>>>>> Dan >>>>>> >>>>>> ___ >>>>>> Bioc-devel@r-project.org mailing list >>>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >>>>>> >>>>> >>>>> >>>>> >>>>> -- >>>>> Levi Waldron >>>>> Assistant Professor of Biostatistics >>>>> City University of New York School of Public Health, Hunter >>>>> College >>>>> 2180 3rd Ave Rm 538 >>>>> New York NY 10035-4003 >>>>> phone: 212-396-7747 >>>>> www.waldronlab.org >>>>> >>>>> [[alternative HTML version deleted]] >>>>> >>>>> ___ >>>>> Bioc-devel@r-project.org mailing list >>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >>>>> >>>> >>>> ___ >>>> Bioc-devel@r-project.org mailing list >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >>>> >>> >>> -- >>> Hervé Pagès >>> >>> Program in Computational Biology >>> Division of Public Health Sciences >>> Fred Hutchinson Cancer Research Center >>> 1100 Fairview Ave. N, M1-B514 >>> P.O. Box 19024 >>> Seattle, WA 98109-1024 >>> >>> E-mail: hpa...@fredhutch.org >>> Phone: (206) 667-5791 >>> Fax:(206) 667-1319 >>> > > -- > Hervé Pagès > > Program in Computational Biology > Division of Public Health Sciences > Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N, M1-B514 > P.O. Box 19024 > Seattle, WA 98109-1024 > > E-mail: hpa...@fredhutch.org > Phone: (206) 667-5791 > Fax:(206) 667-1319 > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] BioC 3.2 branch created
Thanks. Fixed, the change will propagate soon. Dan - Original Message - > From: "Diego Diez" > To: "Hervé Pagès" > Cc: "Dan Tenenbaum" , "bioc-devel" > > Sent: Friday, October 16, 2015 5:11:08 PM > Subject: Re: [Bioc-devel] BioC 3.2 branch created > > Nice addition, thank you. Just want to note that now the 3.1 page > says > "April 17, 2005". Thats a long time ago! I guess it means "April 17, > 2015". > > Diego > > On Sat, Oct 17, 2015 at 3:30 AM, Hervé Pagès > wrote: > > On 10/16/2015 10:52 AM, Dan Tenenbaum wrote: > >> > >> > >> > >> - Original Message - > >>> > >>> From: "Hervé Pagès" > >>> To: "Dan Tenenbaum" , "Levi Waldron" > >>> > >>> Cc: "bioc-devel" > >>> Sent: Friday, October 16, 2015 10:07:03 AM > >>> Subject: Re: [Bioc-devel] BioC 3.2 branch created > >>> > >>> Hi Dan, > >>> > >>> Thanks for making that change. Would be great to have this for > >>> the > >>> previous releases too. One often lands on an announcement page > >>> directly > >>> from Google and has no easy way to tell when that release > >>> happened. > >>> > >> > >> Just committed the change, it should show up son. Looks like we > >> used to do > >> this and then stopped at some point. > > > > > > Great. Thanks Dan! > > > > H. > > > > > >> Dan > >> > >> > >>> Thanks, > >>> H. > >>> > >>> > >>> On 10/16/2015 08:45 AM, Dan Tenenbaum wrote: > >>>> > >>>> Done, the change should appear within 20 minutes. Thanks for the > >>>> suggestion. > >>>> Dan > >>>> > >>>> > >>>> - Original Message - > >>>>> > >>>>> From: "Levi Waldron" > >>>>> To: "bioc-devel" > >>>>> Sent: Friday, October 16, 2015 8:23:17 AM > >>>>> Subject: Re: [Bioc-devel] BioC 3.2 branch created > >>>>> > >>>>> Just a small suggestion, it might be helpful to put a date on > >>>>> https://www.bioconductor.org/news/bioc_3_2_release/ - currently > >>>>> it's > >>>>> not > >>>>> obvious when you land on that page when the announcement was > >>>>> made, > >>>>> or > >>>>> that > >>>>> this is the current release version. > >>>>> > >>>>> Thanks core team for your hard work in getting another release > >>>>> out > >>>>> on > >>>>> schedule! > >>>>> > >>>>> > >>>>> > >>>>> On Tue, Oct 13, 2015 at 4:20 PM, Dan Tenenbaum > >>>>> > >>>>> wrote: > >>>>> > >>>>>> > >>>>>> The BioC 3.2 branch is now ready. > >>>>>> > >>>>>> Remember, you always have access to 2 versions of your > >>>>>> package: > >>>>>> the "release" and the "devel" versions. > >>>>>> > >>>>>> Right now the "release" version of your package (which is not > >>>>>> officially released yet but will be tomorrow if > >>>>>> everything goes well) is in the 3.2 branch and accessible at: > >>>>>> > >>>>>> > >>>>>> https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ > >>>>>> > >>>>>> > >>>>>> Only bug fixes and documentation improvements should go here. > >>>>>> > >>>>>> As always the "devel" version of your package is at: > >>>>>> > >>>>>> > >>>>>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ > >>>>>> > >>>>>> Similarly for experiment packages, where your package is > >>>>>> available > >>>>>> in > >>>>>> devel at > >>>>>> > >>>>>> https://hedgehog.fhcrc.org/bioc-data/trunk/exp
